RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 NEMP1O14524 444 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 STK10O94804 968 aaKnown RBP18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 ERCC2P18074 760 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 GLUD2P49448 558 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 MSLNQ13421 630 aaPredicted RBP18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 PAQR9Q6ZVX9 377 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 DHDDSQ86SQ9 333 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 LENG8Q96PV6 779 aaPredicted RBP18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 UNKQ9C0B0 810 aaKnown RBP18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 SORCS3Q9UPU3 1222 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 ZCWPW2A0A1B0GU75 182 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 EEF2KO00418 725 aaKnown RBP18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 CCNT2O60583 730 aaKnown RBP18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 SNAI1O95863 264 aaPredicted RBP18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 SMPD1P17405 629 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 GRK2P25098 689 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 PTPN3P26045 913 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 SERPINB5P36952 375 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 RPL34P49207 117 aaKnown RBP18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 AQP4P55087 323 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 PDK1Q15118 436 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 EML3Q32P44 896 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 PPM1LQ5SGD2 360 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 NPWQ8N729 165 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 OR6Y1Q8NGX8 325 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 DNAJC28Q9NX36 388 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 GPR32O75388 356 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 HSPA4LO95757 839 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 FYNP06241 537 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 C2P06681 752 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 SERPINB6P35237 376 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 GJA5P36382 358 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 TBL3Q12788 808 aaKnown RBP18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 DCAF4L1Q3SXM0 396 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 CFAP157Q5JU67 520 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 APPL2Q8NEU8 664 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 HSFY1Q96LI6 401 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 RBBP8Q99708 897 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 VANGL2Q9ULK5 521 aa18.5■□□□□ 0.55
PTP4A3-202ENST00000349124 FKBP6O75344 327 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 TOMM70O94826 608 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 CD68P34810 354 aaPredicted RBP18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 DEUP1Q05D60 604 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 DLG1Q12959 904 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 DPYSQ14117 519 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 ZNF792Q3KQV3 632 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 KIAA0319Q5VV43 1072 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 ANKRD13AQ8IZ07 590 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 SLC7A14Q8TBB6 771 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 ACTRT2Q8TDY3 377 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 NPY6RQ99463 290 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 CPNE1Q99829 537 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 EIF2B3Q9NR50 452 aaKnown RBP18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 AIM2O14862 343 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 DCLK1O15075 740 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 AHCYL1O43865 530 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 COX4I1P13073 169 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 MX2P20592 715 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 MPSTP25325 297 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 KLF10Q13118 480 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 ANKRD20A4Q4UJ75 823 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 GRTP1Q5TC63 336 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 SPATA6LQ8N4H0 392 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 B3GALNT2Q8NCR0 500 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 GDPD5Q8WTR4 605 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 GATA5Q9BWX5 397 aaPredicted RBP18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 ZCWPW1Q9H0M4 648 aa18.49■□□□□ 0.55
PTP4A3-202ENST00000349124 RAG1P15918 1043 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 ACADSBP45954 432 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 GLRBP48167 497 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 ATXN3P54252 364 aaPredicted RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 ZBTB17Q13105 803 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 INSCQ1MX18 579 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 EPGNQ6UW88 154 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 PDSS2Q86YH6 399 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 KCNK16Q96T55 309 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 MLPHQ9BV36 600 aaPredicted RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 CDH19Q9H159 772 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 FAM124BQ9H5Z6 455 aaPredicted RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 IARS2Q9NSE4 1012 aaKnown RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 KCNH4Q9UQ05 1017 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 PIN4Q9Y237 131 aaKnown RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 PCDHB12Q9Y5F1 795 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 YJEFN3A6XGL0 299 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 TK2O00142 265 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 ALOX15P16050 662 aaPredicted RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 EPHA3P29320 983 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 PSTKQ8IV42 348 aaKnown RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 CMTM5Q96DZ9 223 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 GBP5Q96PP8 586 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 NR1H4Q96RI1 486 aaPredicted RBP18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 KATNBL1Q9H079 304 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 IGSF9Q9P2J2 1179 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 SLC39A10Q9ULF5 831 aa18.48■□□□□ 0.55
PTP4A3-202ENST00000349124 UBQLN1Q9UMX0 589 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms