RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MARK1Q9P0L2 795 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 LIMD1Q9UGP4 676 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 DNPEPQ9ULA0 475 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 SHROOM3Q8TF72 1996 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 MIA3Q5JRA6 1907 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 NEDD8-MDP1E9PL57 170 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 CLDN11O75508 207 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 OR1E1P30953 314 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 GDI1P31150 447 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 ACVRL1P37023 503 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 KCNJ1P48048 391 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 MAPKAPK2P49137 400 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 CYP1B1Q16678 543 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 AAK1Q2M2I8 961 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 ANO4Q32M45 955 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 ARHGAP36Q6ZRI8 547 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 YAF2Q8IY57 180 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 UMODL1-AS1Q8N2C9 162 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 TTC8Q8TAM2 541 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 SLC35B2Q8TB61 432 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 P3H4Q92791 437 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 DDX47Q9H0S4 455 aaKnown RBP19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 TBC1D30Q9Y2I9 924 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 TICRRQ7Z2Z1 1910 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 MYO10Q9HD67 2058 aa19.5■□□□□ 0.71
CHMP4A-201ENST00000347519 COL4A2P08572 1712 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 ARNTLO00327 626 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 LIASO43766 372 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 CYBBP04839 570 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 TYRP14679 529 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 EIF3EP60228 445 aaKnown RBP19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 GALNT2Q10471 571 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 ZNF177Q13360 481 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 PDGFRLQ15198 375 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 CCNG2Q16589 344 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 MPP7Q5T2T1 576 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 ZC3H18Q86VM9 953 aaKnown RBP19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 C12orf40Q86WS4 652 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 NAT16Q8N8M0 369 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 C12orf50Q8NA57 414 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 OR7D4Q8NG98 312 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 HMCESQ96FZ2 354 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 LMLNQ96KR4 655 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 TRMT61BQ9BVS5 477 aaKnown RBP19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 ECT2Q9H8V3 914 aa19.49■□□□□ 0.71
CHMP4A-201ENST00000347519 A0A0D9SEW6 157 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 RASA4BC9J798 803 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 H0Y626 953 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 DFFAO00273 331 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 TRIM24O15164 1050 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 CHADO15335 359 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 RASA4O43374 803 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 PHF2O75151 1096 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 ASGR2P07307 311 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 RHOCP08134 193 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 ADH5P11766 374 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 MZF1P28698 734 aaPredicted RBP19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 NR2C2P49116 596 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 PAPOLAP51003 745 aaKnown RBP19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 OASLQ15646 514 aaKnown RBP19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 KLHL7Q8IXQ5 586 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 LZTR1Q8N653 840 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 TTC13Q8NBP0 860 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 NOA1Q8NC60 698 aaKnown RBP19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 ATP2A3Q93084 1043 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 MAGOHBQ96A72 148 aaKnown RBP19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 LGMNQ99538 433 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 KCNK12Q9HB15 430 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 GTSE1Q9NYZ3 720 aa19.48■□□□□ 0.71
CHMP4A-201ENST00000347519 TYW5A2RUC4 315 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 RIOK3O14730 519 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 HOXC11O43248 304 aaPredicted RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 RAMP2O60895 175 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 NFATC1O95644 943 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 RBP3P10745 1247 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 VAV1P15498 845 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 CD70P32970 193 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 SERPINB6P35237 376 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 COILP38432 576 aaPredicted RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 NDST2P52849 883 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 MRPS25P82663 173 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 GNA12Q03113 381 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 LMAN2Q12907 356 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 RUNX3Q13761 415 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 PUS10Q3MIT2 529 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 RNF219Q5W0B1 726 aaPredicted RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 NAIF1Q69YI7 327 aaPredicted RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 MFN1Q8IWA4 741 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 PLCD3Q8N3E9 789 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 CEP112Q8N8E3 955 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 FIBINQ8TAL6 211 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 ARHGEF2Q92974 986 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 CHFRQ96EP1 664 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 ALG14Q96F25 216 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 RETREG1Q9H6L5 497 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 OR51B4Q9Y5P0 310 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 KIAA1549LQ6ZVL6 1849 aa19.47■□□□□ 0.71
CHMP4A-201ENST00000347519 GOLGA6L10A0A0M3HER8 536 aa19.46■□□□□ 0.71
CHMP4A-201ENST00000347519 ILVBLA1L0T0 632 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms