RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 GDE1Q9NZC3 331 aa7.36□□□□□ -1.23
NUP43-201ENST00000340413 LGALS13Q9UHV8 139 aa7.36□□□□□ -1.23
NUP43-201ENST00000340413 SLC24A2Q9UI40 661 aa7.36□□□□□ -1.23
NUP43-201ENST00000340413 NFU1Q9UMS0 254 aa7.36□□□□□ -1.23
NUP43-201ENST00000340413 KDELR3O43731 214 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 TTC4O95801 387 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 EPHB2P29323 1055 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 SLC18A1P54219 525 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ARPP19P56211 112 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ERVFC1P60507 584 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 CCDC38Q502W7 563 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 INO80DQ53TQ3 878 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 PPP6R3Q5H9R7 873 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 FAM109BQ6ICB4 259 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 GALNT7Q86SF2 657 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ATPAF2Q8N5M1 289 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ZSCAN18Q8TBC5 510 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 CPT1BQ92523 772 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 USP13Q92995 863 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 PGM2Q96G03 612 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 SERPINB12Q96P63 405 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 SSU72Q9NP77 194 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 HMGB1P1B2RPK0 211 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 I6L893 689 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 PRAMEF11O60813 436 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 DNAJB1P25685 340 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 NSUN2Q08J23 767 aaKnown RBP eCLIP7.35□□□□□ -1.23
NUP43-201ENST00000340413 SLC10A2Q12908 348 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 SERINC3Q13530 473 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 FAM133BQ5BKY9 247 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 ANKRD20A2Q5SQ80 823 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ANKRD20A1Q5TYW2 823 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ANKRD20A3Q5VUR7 823 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 PLPP4Q5VZY2 271 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 KCTD11Q693B1 232 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 GPR153Q6NV75 609 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ARHGEF18Q6ZSZ5 1173 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 LMNTD2Q8IXW0 634 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 MICALL1Q8N3F8 863 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 HCAR2Q8TDS4 363 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 WFIKKN2Q8TEU8 576 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 PDFQ9HBH1 243 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ANLNQ9NQW6 1124 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 GPATCH2LQ9NWQ4 482 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ZNF446Q9NWS9 450 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ARIH1Q9Y4X5 557 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 A0A087WUV0 522 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 AP2A1O95782 977 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 PBX3P40426 434 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 POLD2P49005 469 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 RPL26P61254 145 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 WASHC5Q12768 1159 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 GPS1Q13098 491 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 HLTFQ14527 1009 aaKnown RBP eCLIP7.35□□□□□ -1.23
NUP43-201ENST00000340413 GRM3Q14832 879 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 KLHL38Q2WGJ6 581 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 PREPLQ4J6C6 727 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 TNFAIP8L3Q5GJ75 292 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 FYB2Q5VWT5 728 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 NLRP9Q7RTR0 991 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 SUGP1Q8IWZ8 645 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 PDIK1LQ8N165 341 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 ATG4AQ8WYN0 398 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 NDRG1Q92597 394 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 ISG20Q96AZ6 181 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 B3GALT6Q96L58 329 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 CEP44Q9C0F1 390 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 SLC25A51Q9H1U9 297 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 NSUN3Q9H649 340 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 ZNF334Q9HCZ1 680 aaPredicted RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 MAN1C1Q9NR34 630 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 KLHL11Q9NVR0 708 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 NSMCE4AQ9NXX6 385 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 SENP1Q9P0U3 644 aa7.35□□□□□ -1.23
NUP43-201ENST00000340413 DNMT3BQ9UBC3 853 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 RPL26L1Q9UNX3 145 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 ZNF106Q9H2Y7 1883 aaKnown RBP7.35□□□□□ -1.23
NUP43-201ENST00000340413 KCNN4O15554 427 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 MAFKO60675 156 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 PTPN3P26045 913 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 CNTFP26441 200 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 ATXN1P54253 815 aaKnown RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 SLC7A5Q01650 507 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 GBE1Q04446 702 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 SULT2A1Q06520 285 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 CAMK1Q14012 370 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 SHHQ15465 462 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 LRIT3Q3SXY7 679 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 DAB2IPQ5VWQ8 1189 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 NADSYN1Q6IA69 706 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 NAPEPLDQ6IQ20 393 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 FBXL22Q6P050 247 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 ATP11CQ8NB49 1132 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 P2RY11Q96G91 374 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 ATP13A1Q9HD20 1204 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 CASS4Q9NQ75 786 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 SFMBT1Q9UHJ3 866 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 SNX24Q9Y343 169 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 V9GYY5 206 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms