RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DNAI2Q9GZS0 605 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 KCNK4Q9NYG8 393 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 TAS2R1Q9NYW7 299 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 RCOR3Q9P2K3 495 aaPredicted RBP16.72■□□□□ 0.27
LITAF-201ENST00000339430 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 ATP11BQ9Y2G3 1177 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 TSC2P49815 1807 aa16.72■□□□□ 0.27
LITAF-201ENST00000339430 YJEFN3A6XGL0 299 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 E7ENQ6 273 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 LYPLA1O75608 230 aaPredicted RBP16.71■□□□□ 0.27
LITAF-201ENST00000339430 ALDH1A2O94788 518 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 MLNP12872 115 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 KCNA4P22459 653 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 GLUD2P49448 558 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 CCL23P55773 120 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 IFRD2Q12894 506 aaPredicted RBP16.71■□□□□ 0.27
LITAF-201ENST00000339430 STX3Q13277 289 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 PDE1CQ14123 709 aaPredicted RBP16.71■□□□□ 0.27
LITAF-201ENST00000339430 RCN2Q14257 317 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 PDK1Q15118 436 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 N4BP2L1Q5TBK1 243 aaPredicted RBP16.71■□□□□ 0.27
LITAF-201ENST00000339430 GPRIN1Q7Z2K8 1008 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 TREML1Q86YW5 311 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 DBF4BQ8NFT6 615 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 CDKL2Q92772 493 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 NT5C3BQ969T7 300 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 ATXN7L3BQ96GX2 97 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 TOX2Q96NM4 488 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 KCNK16Q96T55 309 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 TUBB6Q9BUF5 446 aa16.71■□□□□ 0.27
LITAF-201ENST00000339430 DDX43Q9NXZ2 648 aaKnown RBP16.71■□□□□ 0.27
LITAF-201ENST00000339430 PPP1R12AO14974 1030 aaPredicted RBP16.71■□□□□ 0.26
LITAF-201ENST00000339430 FYNP06241 537 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 THP07101 528 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 SKIP12755 728 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 PGAM1P18669 254 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 ALDH18A1P54886 795 aaKnown RBP16.71■□□□□ 0.26
LITAF-201ENST00000339430 SESN3P58005 492 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 PPM1JQ5JR12 505 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 RASSF3Q86WH2 238 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 OR52K1Q8NGK4 314 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 FBXO27Q8NI29 283 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 RILPQ96NA2 401 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 EBF4Q9BQW3 602 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 CRTAC1Q9NQ79 661 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.71■□□□□ 0.26
LITAF-201ENST00000339430 KLHL8Q9P2G9 620 aaPredicted RBP16.71■□□□□ 0.26
LITAF-201ENST00000339430 EMCNQ9ULC0 261 aa16.71■□□□□ 0.26
LITAF-201ENST00000339430 HBS1LQ9Y450 684 aaKnown RBP16.71■□□□□ 0.26
LITAF-201ENST00000339430 C9IYK1 514 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 I6L893 689 aaPredicted RBP16.7■□□□□ 0.26
LITAF-201ENST00000339430 ITM2AO43736 263 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 SNNO75324 88 aaPredicted RBP16.7■□□□□ 0.26
LITAF-201ENST00000339430 POMCP01189 267 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 FAM200BP0CF97 657 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 CACNA2D1P54289 1103 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 PDE1BQ01064 536 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 DPYSQ14117 519 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 KRT72Q14CN4 511 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 TAF11Q15544 211 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 TIFABQ6ZNK6 161 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 ZNF598Q86UK7 904 aaKnown RBP16.7■□□□□ 0.26
LITAF-201ENST00000339430 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.7■□□□□ 0.26
LITAF-201ENST00000339430 FERMT1Q9BQL6 677 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 INPP5FQ9Y2H2 1132 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 SNX10Q9Y5X0 201 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 RPS6KL1Q9Y6S9 549 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 GSRP00390 522 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 ITGA2BP08514 1039 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 USP17L7P0C7H9 530 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 ERCC2P18074 760 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 CNTFP26441 200 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 CYP2C18P33260 490 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 KDSRQ06136 332 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 KPNB1Q14974 876 aaKnown RBP16.7■□□□□ 0.26
LITAF-201ENST00000339430 C1orf53Q5VUE5 145 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 PSTKQ8IV42 348 aaKnown RBP16.7■□□□□ 0.26
LITAF-201ENST00000339430 SLC2A13Q96QE2 648 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 FTHL17Q9BXU8 183 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 TSPYL2Q9H2G4 693 aaPredicted RBP16.7■□□□□ 0.26
LITAF-201ENST00000339430 TMEM30AQ9NV96 361 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 ZFATQ9P243 1243 aa16.7■□□□□ 0.26
LITAF-201ENST00000339430 MYBPHLA2RUH7 354 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 EIF4E1BA6NMX2 242 aaKnown RBP16.69■□□□□ 0.26
LITAF-201ENST00000339430 DCLK1O15075 740 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 BIRC5O15392 142 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 AP1G2O75843 785 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 NCAM1P13591 858 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 ADRA1BP35368 520 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 PAFAH1B3Q15102 231 aaKnown RBP16.69■□□□□ 0.26
LITAF-201ENST00000339430 BNIPLQ7Z465 357 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.69■□□□□ 0.26
LITAF-201ENST00000339430 SENP8Q96LD8 212 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 FCRL3Q96P31 734 aaPredicted RBP16.69■□□□□ 0.26
LITAF-201ENST00000339430 RHOBTB2Q9BYZ6 727 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 WWP1Q9H0M0 922 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 C11orf49Q9H6J7 331 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 EIF2B3Q9NR50 452 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms