RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 STILQ15468 1287 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3GQ6DHY5 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3CQ6IPX1 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TMEM270Q6UE05 265 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 GPR155Q7Z3F1 870 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
CSMD2-202ENST00000338325 SPATS2Q86XZ4 545 aaKnown RBP11.88□□□□□ -0.51
CSMD2-202ENST00000338325 HSCBQ8IWL3 235 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3Q8IZP1 549 aaPredicted RBP11.88□□□□□ -0.51
CSMD2-202ENST00000338325 MFSD2AQ8NA29 543 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 FGF11Q92914 225 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 PTPRN2Q92932 1015 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 COL26A1Q96A83 441 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 SLC39A13Q96H72 371 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 RPL10LQ96L21 214 aaKnown RBP11.88□□□□□ -0.51
CSMD2-202ENST00000338325 HSFY1Q96LI6 401 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 SLCO3A1Q9UIG8 710 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 CLCA2Q9UQC9 943 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 CAPN9O14815 690 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 MOCS2O96007 188 aaPredicted RBP11.87□□□□□ -0.51
CSMD2-202ENST00000338325 PLA2G2AP14555 144 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 ACP1P24666 158 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 DRD3P35462 400 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 NUDT1P36639 197 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 NNMTP40261 264 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 STK19P49842 368 aaPredicted RBP11.87□□□□□ -0.51
CSMD2-202ENST00000338325 INSM1Q01101 510 aaPredicted RBP11.87□□□□□ -0.51
CSMD2-202ENST00000338325 CNGA2Q16280 664 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.87□□□□□ -0.51
CSMD2-202ENST00000338325 IQCHQ86VS3 1027 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 APCDD1Q8J025 514 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 LGI2Q8N0V4 545 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 FAM131CQ96AQ9 280 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 SPAG5Q96R06 1193 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 TSG101Q99816 390 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 ZSWIM1Q9BR11 485 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 MIS12Q9H081 205 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 KDM4CQ9H3R0 1056 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 ARHGAP20Q9P2F6 1191 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 CYTH4Q9UIA0 394 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 PCDHB4Q9Y5E5 795 aa11.87□□□□□ -0.51
CSMD2-202ENST00000338325 SLC7A4O43246 635 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 PLRG1O43660 514 aaKnown RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 APOEP02649 317 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 FYNP06241 537 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 BRD2P25440 801 aaKnown RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 KRT85P78386 507 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 TLE3Q04726 772 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 CCDC173Q0VFZ6 552 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 OVGP1Q12889 678 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 SLC12A1Q13621 1099 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D25Q3MII6 688 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 RAP1GAP2Q684P5 730 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 ZNF605Q86T29 641 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 TAC4Q86UU9 113 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 CHSY1Q86X52 802 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 ERICH1Q86X53 443 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 ZNF843Q8N446 348 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 DCBLD1Q8N8Z6 715 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 SLC35C1Q96A29 364 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 FAM149B1Q96BN6 582 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 TJP2Q9UDY2 1190 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 XPO7Q9UIA9 1087 aaKnown RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 NAALADL1Q9UQQ1 740 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 DMTF1Q9Y222 760 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 SART1O43290 800 aaKnown RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 SDC3O75056 442 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 RTN2O75298 545 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 VAV1P15498 845 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 TACR2P21452 398 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 MAT2AP31153 395 aaKnown RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 PRCPP42785 496 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 METAP1P53582 386 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 CXADRP78310 365 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 NUCB2P80303 420 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 FKBP3Q00688 224 aaKnown RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 E2F1Q01094 437 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 STAT4Q14765 748 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 DSG4Q86SJ6 1040 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 TRIM69Q86WT6 500 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 SPACA3Q8IXA5 215 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 OR8D1Q8WZ84 308 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 GOLPH3LQ9H4A5 285 aa11.86□□□□□ -0.51
CSMD2-202ENST00000338325 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
CSMD2-202ENST00000338325 TDRD6O60522 2096 aaKnown RBP11.85□□□□□ -0.51
CSMD2-202ENST00000338325 FLNBO75369 2602 aaKnown RBP11.85□□□□□ -0.51
CSMD2-202ENST00000338325 CFAP46Q8IYW2 2715 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 A0A1W2PQ27 194 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 A0A1W2PQ64 194 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
CSMD2-202ENST00000338325 SIGLEC6O43699 453 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 ZNF202O95125 648 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 CALCAP01258 141 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 PDGFRAP16234 1089 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 FMO5P49326 533 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 NUMBP49757 651 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms