RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ZSCAN18Q8TBC5 510 aaPredicted RBP23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 PGAP3Q96FM1 320 aaPredicted RBP23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 FCRL2Q96LA5 508 aaPredicted RBP23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 VANGL2Q9ULK5 521 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 PTPRDP23468 1912 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 THSD7BQ9C0I4 1608 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 ARHGAP42A6NI28 874 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 LYPLA1O75608 230 aaPredicted RBP23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 NQO1P15559 274 aaKnown RBP23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 RPL10AP62906 217 aaKnown RBP23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 TMPRSS15P98073 1019 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 PDE1CQ14123 709 aaPredicted RBP23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 NOMO2Q5JPE7 1267 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 GLB1LQ6UWU2 654 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 RNF180Q86T96 592 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 UTP4Q969X6 686 aaKnown RBP23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 ZFATQ9P243 1243 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 ARMCX1Q9P291 453 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 IGSF9Q9P2J2 1179 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 ZNF180Q9UJW8 692 aa23.64■■□□□ 1.38
CLPTM1-201ENST00000337392 IRAK2O43187 625 aa23.64■■□□□ 1.37
CLPTM1-201ENST00000337392 SERPINB3P29508 390 aa23.64■■□□□ 1.37
CLPTM1-201ENST00000337392 DCLRE1AQ6PJP8 1040 aa23.64■■□□□ 1.37
CLPTM1-201ENST00000337392 GLT1D1Q96MS3 346 aa23.64■■□□□ 1.37
CLPTM1-201ENST00000337392 LBHD1Q9BQE6 289 aaPredicted RBP23.64■■□□□ 1.37
CLPTM1-201ENST00000337392 GSTA1P08263 222 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 HMBSP08397 361 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 PGAM1P18669 254 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 E2F5Q15329 346 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 TEX44Q53QW1 395 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 ALYREFQ86V81 257 aaKnown RBP23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 THEM5Q8N1Q8 247 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 PCSK9Q8NBP7 692 aaKnown RBP23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 HEY2Q9UBP5 337 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 SAT1P21673 171 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 SATB1Q01826 763 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 GALNT2Q10471 571 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 HSF5Q4G112 596 aaPredicted RBP23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 STEAP4Q687X5 459 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 C4orf22Q6V702 233 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 TMEM120AQ9BXJ8 343 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 CRISPLD1Q9H336 500 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 EMCNQ9ULC0 261 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 AP2A1O95782 977 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 TCTN1Q2MV58 587 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 ARTNQ5T4W7 220 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 TMEM173Q86WV6 379 aaPredicted RBP23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 TNS4Q8IZW8 715 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 CERS2Q96G23 380 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 GPR62Q9BZJ7 368 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 UNKQ9C0B0 810 aaKnown RBP23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 SLC39A8Q9C0K1 460 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 L3MBTL1Q9Y468 752 aa23.63■■□□□ 1.37
CLPTM1-201ENST00000337392 ALDH1A2O94788 518 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 UNC5CO95185 931 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 ITGA2BP08514 1039 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 FAM163BP0C2L3 166 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 MYL2P10916 166 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 NMBRP28336 390 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 PDE1BQ01064 536 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 FYB2Q5VWT5 728 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 MIB1Q86YT6 1006 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 ARID3BQ8IVW6 561 aaPredicted RBP23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 ARHGAP12Q8IWW6 846 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 VWA8A3KMH1 1905 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 A0A1W2PQ45 241 aaPredicted RBP23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 A0A1W2PQY0 241 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 SETDB1Q15047 1291 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 N4BP2L1Q5TBK1 243 aaPredicted RBP23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 RSPO2Q6UXX9 243 aaPredicted RBP23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 ASRGL1Q7L266 308 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 COLGALT2Q8IYK4 626 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 PLD6Q8N2A8 252 aaKnown RBP23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 RAET1EQ8TD07 263 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 HDAC11Q96DB2 347 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 RGS18Q9NS28 235 aa23.62■■□□□ 1.37
CLPTM1-201ENST00000337392 MYO16Q9Y6X6 1858 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 ITM2AO43736 263 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 GSRP00390 522 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 F9P00740 461 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 IGLV3-25P01717 112 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 DLDP09622 509 aaKnown RBP23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 HTRA3P83110 453 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 IRF9Q00978 393 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 KCTD11Q693B1 232 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 SLC24A5Q71RS6 500 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 CIR1Q86X95 450 aaPredicted RBP23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 EGFL6Q8IUX8 553 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 NUDCD3Q8IVD9 361 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 FERMT1Q9BQL6 677 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 GBA3Q9H227 469 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 SRRDQ9UH36 339 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 ZFP69BQ9UJL9 534 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 SF3B1O75533 1304 aaKnown RBP eCLIP23.61■■□□□ 1.379e-6■■■■■ 68.9
CLPTM1-201ENST00000337392 ZCWPW2A0A1B0GU75 182 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 POLBP06746 335 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 POU6F1Q14863 301 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 IPMKQ8NFU5 416 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 STARD7Q9NQZ5 370 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms