RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KLHL5Q96PQ7 755 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 C20orf96Q9NUD7 363 aaPredicted RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 RNF186Q9NXI6 227 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 SLC2A6Q9UGQ3 507 aa9.06□□□□□ -0.96
SNCA-201ENST00000336904 MTO1Q9Y2Z2 717 aaKnown RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.06□□□□□ -0.96
SNCA-201ENST00000336904 MANSC4A6NHS7 340 aaPredicted RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 DCTN3O75935 186 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 SORBS2O94875 1100 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 ANP32DO95626 131 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 ARSAP15289 507 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 TPSB2P20231 275 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 RPL34P49207 117 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 USP46P62068 366 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 CTBP1Q13363 440 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 ITGA9Q13797 1035 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 SEPT6Q14141 434 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 TPSAB1Q15661 275 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 RPS27LQ71UM5 84 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 LIMS2Q7Z4I7 341 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 DENND6AQ8IWF6 608 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 CERS2Q96G23 380 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 FTHL17Q9BXU8 183 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 XAB2Q9HCS7 855 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 MOCS1Q9NZB8 636 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 DNAJC16Q9Y2G8 782 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 RANBP2P49792 3224 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 A0A1W2PQH9 124 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 C2CD2LO14523 706 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 PAGE1O75459 146 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 CCNB1P14635 433 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 ETFBP38117 255 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 LHX1P48742 406 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 ITKQ08881 620 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 RASA2Q15283 850 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 TRIM68Q6AZZ1 485 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 LRRC8BQ6P9F7 803 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 LDB1Q86U70 411 aaPredicted RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 MCUQ8NE86 351 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 NSMCE1Q8WV22 266 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 DENND2DQ9H6A0 471 aaPredicted RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 TXLNGQ9NUQ3 528 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 SLC39A10Q9ULF5 831 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 FIS1Q9Y3D6 152 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 ACTL7AQ9Y615 435 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 GOLGA8QA0A0J9YX86 632 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 GOLGA8OA6NCC3 632 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 GOLGA8NF8WBI6 632 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 NDC80O14777 642 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 AURKAO14965 403 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 OPHN1O60890 802 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 PRKCGP05129 697 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 ODC1P11926 461 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 GARSP41250 739 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 SARNPP82979 210 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 MPP1Q00013 466 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 INTS6LQ5JSJ4 861 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 RTN4RL1Q86UN2 441 aaPredicted RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 SPATA2LQ8IUW3 424 aaPredicted RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 GBP7Q8N8V2 638 aaPredicted RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 RSPH1Q8WYR4 309 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 FAM167BQ9BTA0 163 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 CADM1Q9BY67 442 aaKnown RBP9.05□□□□□ -0.96
SNCA-201ENST00000336904 SPC25Q9HBM1 224 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 SNX15Q9NRS6 342 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 SLC38A7Q9NVC3 462 aa9.05□□□□□ -0.96
SNCA-201ENST00000336904 CFAP73A6NFT4 308 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 PRR5-ARHGAP8B1AHC4 643 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 TK2O00142 265 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 NEMP1O14524 444 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 GSRP00390 522 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 SLC4A1P02730 911 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 PGAM1P18669 254 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 ARHGAP8P85298 464 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 CDK16Q00536 496 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 NIPAL4Q0D2K0 466 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 STX3Q13277 289 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 ITGA7Q13683 1181 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 PARP6Q2NL67 630 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 MFSD14CQ5VZR4 134 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 BTBD8Q5XKL5 378 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 FSTL4Q6MZW2 842 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 RGS9BPQ6ZS82 235 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 RAPH1Q70E73 1250 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 ZSCAN18Q8TBC5 510 aaPredicted RBP9.04□□□□□ -0.96
SNCA-201ENST00000336904 WDR60Q8WVS4 1066 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 KCTD13Q8WZ19 329 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 ALKBH8Q96BT7 664 aaKnown RBP9.04□□□□□ -0.96
SNCA-201ENST00000336904 MARK4Q96L34 752 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 FCRL2Q96LA5 508 aaPredicted RBP9.04□□□□□ -0.96
SNCA-201ENST00000336904 OMDQ99983 421 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 FICDQ9BVA6 458 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 PNPLA8Q9NP80 782 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 CNGB3Q9NQW8 809 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 CDH9Q9ULB4 789 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 LOC100653049A0A140TA62 436 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 TMEM88BA6NKF7 163 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 GPR182O15218 404 aa9.04□□□□□ -0.96
SNCA-201ENST00000336904 GYG2O15488 501 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms