RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 MAP7D3Q8IWC1 876 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 KATNAL2Q8IYT4 538 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 APCDD1Q8J025 514 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 RNF25Q96BH1 459 aaPredicted RBP13.24□□□□□ -0.29
APTX-201ENST00000309615 ALS2CR12Q96Q35 445 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 FEM1AQ9BSK4 669 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 MFHAS1Q9Y4C4 1052 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 PCDHA3Q9Y5H8 950 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 MIA3Q5JRA6 1907 aa13.24□□□□□ -0.29
APTX-201ENST00000309615 A0A0D9SEW6 157 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 CCDC66A2RUB6 948 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 WASH4PA8MWX3 477 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 RHOCP08134 193 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 CHRNB1P11230 501 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 CTNNA2P26232 953 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 MAPKAPK2P49137 400 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 PEX5P50542 639 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 FUT11Q495W5 492 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 ANKRD20A8PQ5CZ79 823 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 C6orf118Q5T5N4 469 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 EMC10Q5UCC4 262 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 RNF219Q5W0B1 726 aaPredicted RBP13.23□□□□□ -0.29
APTX-201ENST00000309615 CWF19L1Q69YN2 538 aaKnown RBP13.23□□□□□ -0.29
APTX-201ENST00000309615 C17orf53Q8N3J3 647 aaPredicted RBP13.23□□□□□ -0.29
APTX-201ENST00000309615 TRIM58Q8NG06 486 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 ALG3Q92685 438 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 NELL2Q99435 816 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 ZNF670Q9BS34 389 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 MUC3BQ9H195 1237 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 RETREG1Q9H6L5 497 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
APTX-201ENST00000309615 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 RCOR3Q9P2K3 495 aaPredicted RBP13.23□□□□□ -0.29
APTX-201ENST00000309615 DOCK4Q8N1I0 1966 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 DCLK1O15075 740 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 DNA2P51530 1060 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 SEC13P55735 322 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 LLGL1Q15334 1064 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 PLEKHG6Q3KR16 790 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 ODF2Q5BJF6 829 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 PITRM1Q5JRX3 1037 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 CCDC105Q8IYK2 499 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 AHI1Q8N157 1196 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 NPWQ8N729 165 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 NETO2Q8NC67 525 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 PCDH19Q8TAB3 1148 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 SORCS1Q8WY21 1168 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 FAF2Q96CS3 445 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 ALG14Q96F25 216 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 HES6Q96HZ4 224 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 CIPCQ9C0C6 399 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 ZDHHC4Q9NPG8 344 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 HCN2Q9UL51 889 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 OR51B4Q9Y5P0 310 aa13.23□□□□□ -0.29
APTX-201ENST00000309615 ILVBLA1L0T0 632 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
APTX-201ENST00000309615 DDX3YO15523 660 aaKnown RBP13.22□□□□□ -0.29
APTX-201ENST00000309615 PI15O43692 258 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 RAMP2O60895 175 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 ZRANB2O95218 330 aaKnown RBP eCLIP13.22□□□□□ -0.29
APTX-201ENST00000309615 DCNP07585 359 aaKnown RBP13.22□□□□□ -0.29
APTX-201ENST00000309615 CDKN2BP42772 138 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 TNFRSF4P43489 277 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 OXCT1P55809 520 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 GNA12Q03113 381 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 MBLAC2Q68D91 279 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 Q6ZS52 159 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 NUDT18Q6ZVK8 323 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 RCOR2Q8IZ40 523 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 PQLC3Q8N755 202 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 OR7D4Q8NG98 312 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 EXD1Q8NHP7 514 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 WFIKKN2Q8TEU8 576 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 PBXIP1Q96AQ6 731 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
APTX-201ENST00000309615 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 VPS28Q9UK41 221 aa13.22□□□□□ -0.29
APTX-201ENST00000309615 FAM86C2PA6NEL3 165 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 RNF40O75150 1001 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
APTX-201ENST00000309615 ACVRL1P37023 503 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 KIR2DL1P43626 348 aaPredicted RBP13.21□□□□□ -0.29
APTX-201ENST00000309615 RWDD2BP57060 319 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 SLC12A1Q13621 1099 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 POLD3Q15054 466 aaPredicted RBP13.21□□□□□ -0.29
APTX-201ENST00000309615 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 DGKKQ5KSL6 1271 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 MEI1Q5TIA1 1274 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 TMCO3Q6UWJ1 677 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 ZNF783Q6ZMS7 281 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 SPOCD1Q6ZMY3 1216 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 TP53INP2Q8IXH6 220 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 UMODL1-AS1Q8N2C9 162 aa13.21□□□□□ -0.29
APTX-201ENST00000309615 UBL4BQ8N7F7 174 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms