RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CEP57Q86XR8 500 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 ATPAF2Q8N5M1 289 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 DEPDC1BQ8WUY9 529 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 IL12RB2Q99665 862 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 PAIP2Q9BPZ3 127 aaKnown RBP19.88■□□□□ 0.77
HOXC4-201ENST00000303406 PITPNM3Q9BZ71 974 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 SIK2Q9H0K1 926 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 BFARQ9NZS9 450 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 GMIPQ9P107 970 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 PPARGC1AQ9UBK2 798 aaKnown RBP19.88■□□□□ 0.77
HOXC4-201ENST00000303406 ARL2BPQ9Y2Y0 163 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 HS3ST4Q9Y661 456 aa19.88■□□□□ 0.77
HOXC4-201ENST00000303406 FNDC1Q4ZHG4 1894 aaPredicted RBP19.88■□□□□ 0.77
HOXC4-201ENST00000303406 E9PAM4 449 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 MSI1O43347 362 aaKnown RBP19.87■□□□□ 0.77
HOXC4-201ENST00000303406 PIAS1O75925 651 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 POLBP06746 335 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 GSTA1P08263 222 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 SRGAP2BP0DMP2 458 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 ETV4P43268 484 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 GPR15P49685 360 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 GATMP50440 423 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 TBX4P57082 545 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 SESN2P58004 480 aaPredicted RBP19.87■□□□□ 0.77
HOXC4-201ENST00000303406 RPL10AP62906 217 aaKnown RBP19.87■□□□□ 0.77
HOXC4-201ENST00000303406 TRIP4Q15650 581 aaPredicted RBP19.87■□□□□ 0.77
HOXC4-201ENST00000303406 TCTN1Q2MV58 587 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 LINC00523Q86TU6 105 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 ATP6V0D2Q8N8Y2 350 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 ACMSDQ8TDX5 336 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 TOX2Q96NM4 488 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 MLPHQ9BV36 600 aaPredicted RBP19.87■□□□□ 0.77
HOXC4-201ENST00000303406 TLR8Q9NR97 1041 aaKnown RBP19.87■□□□□ 0.77
HOXC4-201ENST00000303406 SYBUQ9NX95 663 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 GRID1Q9ULK0 1009 aa19.87■□□□□ 0.77
HOXC4-201ENST00000303406 ARHGAP42A6NI28 874 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 MATN3O15232 486 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 EDF1O60869 148 aaKnown RBP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 EFEMP2O95967 443 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 PYGBP11216 843 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 CPB1P15086 417 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 NFKB1P19838 968 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 TUBP50607 506 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 USP46P62068 366 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 MGAT5Q09328 741 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 ARMC3Q5W041 872 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 RNF43Q68DV7 783 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 NAPEPLDQ6IQ20 393 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 CASC4Q6P4E1 433 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 ZNF276Q8N554 614 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 ATAD1Q8NBU5 361 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 PPM1EQ8WY54 764 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 FBXO32Q969P5 355 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 FCRL5Q96RD9 977 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 TTPALQ9BTX7 342 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 AAR2Q9Y312 384 aaKnown RBP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 TBKBP1A7MCY6 615 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 COPEO14579 308 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 RFPL1O75677 317 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 USP1O94782 785 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 IL1BP01584 269 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 JCHAINP01591 159 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 ZDHHC11BP0C7U3 371 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 RHOQP17081 205 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 CGB2Q6NT52 195 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 TRPM8Q7Z2W7 1104 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 TMEM135Q86UB9 458 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 CCDC117Q8IWD4 279 aaPredicted RBP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 ZNF683Q8IZ20 524 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 GBP7Q8N8V2 638 aaPredicted RBP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 OR52K1Q8NGK4 314 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 ZNF75CPQ92670 426 aaPredicted RBP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 CELF6Q96J87 481 aaKnown RBP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 PGLYRP2Q96PD5 576 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 DEFB118Q96PH6 123 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 HIPK3Q9H422 1215 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 PRDM5Q9NQX1 630 aaPredicted RBP19.86■□□□□ 0.77
HOXC4-201ENST00000303406 VANGL2Q9ULK5 521 aa19.86■□□□□ 0.77
HOXC4-201ENST00000303406 IGLV3-10A0A075B6K4 115 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 FAM237BA0A1B0GVD1 139 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 MAFKO60675 156 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 PQBP1O60828 265 aaKnown RBP19.85■□□□□ 0.77
HOXC4-201ENST00000303406 VNN2O95498 520 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 IGLV3-27P01718 113 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 CCNB1P14635 433 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 ADRA1DP25100 572 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 KPNA1P52294 538 aaPredicted RBP19.85■□□□□ 0.77
HOXC4-201ENST00000303406 NDST2P52849 883 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 RING1Q06587 406 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 ACTN3Q08043 901 aaPredicted RBP19.85■□□□□ 0.77
HOXC4-201ENST00000303406 RTP2Q5QGT7 225 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 STXBP5Q5T5C0 1151 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 C1orf53Q5VUE5 145 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 SDHAF4Q5VUM1 108 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 UMODL1-AS1Q8N2C9 162 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 AGAP3Q96P47 875 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 CDK5RAP1Q96SZ6 601 aaKnown RBP19.85■□□□□ 0.77
HOXC4-201ENST00000303406 TTLL2Q9BWV7 592 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 SLC39A8Q9C0K1 460 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms