RNA–Protein interactions for RNA: ENST00000293683.9

PDE4A-201, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-201ENST00000293683 VCX3BQ9H321 246 aa17.7■□□□□ 0.42
PDE4A-201ENST00000293683 TCF7L2Q9NQB0 619 aa17.7■□□□□ 0.42
PDE4A-201ENST00000293683 EIF2B3Q9NR50 452 aaKnown RBP17.7■□□□□ 0.42
PDE4A-201ENST00000293683 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.7■□□□□ 0.42
PDE4A-201ENST00000293683 CLIC5Q9NZA1 410 aa17.7■□□□□ 0.42
PDE4A-201ENST00000293683 DTNAQ9Y4J8 743 aa17.7■□□□□ 0.42
PDE4A-201ENST00000293683 CDY2AQ9Y6F7 541 aa17.7■□□□□ 0.42
PDE4A-201ENST00000293683 CDY1Q9Y6F8 540 aa17.7■□□□□ 0.42
PDE4A-201ENST00000293683 CENPFP49454 3210 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 HACD1B0YJ81 288 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 CASQ2O14958 399 aaPredicted RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 LGALS2P05162 132 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 SMIM18P0DKX4 95 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 MAGEA12P43365 314 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 CHN2P52757 468 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 THOP1P52888 689 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 MRPS22P82650 360 aaKnown RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 BST2Q10589 180 aaKnown RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 DCAF6Q58WW2 860 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 OGFRL1Q5TC84 451 aaPredicted RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 TMEM198Q66K66 360 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 LINC01465Q8N7H1 131 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 SLC2A14Q8TDB8 520 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 PPP1R13LQ8WUF5 828 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 AFG1LQ8WV93 481 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 NMD3Q96D46 503 aaKnown RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 NDNQ99608 321 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 EPAS1Q99814 870 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 CCDC28BQ9BUN5 200 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 GATA5Q9BWX5 397 aaPredicted RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 UBAP1Q9NZ09 502 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 TK2O00142 265 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 TOMM70O94826 608 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 FBXO21O94952 628 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 TKTP29401 623 aaKnown RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 GARSP41250 739 aaKnown RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 SERPINB8P50452 374 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 LIMK2P53671 638 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 PKNOX1P55347 436 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 IFRD2Q12894 506 aaPredicted RBP17.69■□□□□ 0.42
PDE4A-201ENST00000293683 SNAPC2Q13487 334 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 LAMB3Q13751 1172 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 CCDC153Q494R4 210 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 GRTP1Q5TC63 336 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 PQLC1Q8N2U9 271 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 TTC39CQ8N584 583 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 DCUN1D1Q96GG9 259 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 HAPLN3Q96S86 360 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 RTKNQ9BST9 563 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 FAM96AQ9H5X1 160 aa17.69■□□□□ 0.42
PDE4A-201ENST00000293683 IRF6O14896 467 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 ATP9BO43861 1147 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 JUNP05412 331 aaKnown RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 PIM1P11309 404 aaPredicted RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 XRCC1P18887 633 aaPredicted RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 SAT1P21673 171 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 GLDCP23378 1020 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 PIK3R1P27986 724 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 NAB1Q13506 487 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 FSCBQ5H9T9 825 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 CERCAMQ5T4B2 595 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 ANKRD52Q8NB46 1076 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 KBTBD7Q8WVZ9 684 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 USP13Q92995 863 aaPredicted RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 KCNK16Q96T55 309 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 EIF2AQ9BY44 585 aaKnown RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 KLHL8Q9P2G9 620 aaPredicted RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 POLR2AP24928 1970 aaKnown RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 DNAH12Q6ZR08 3092 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 ZCWPW2A0A1B0GU75 182 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 FAM72CH0Y354 149 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 C2P06681 752 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 RABGGTBP53611 331 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 BCAT1P54687 386 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 NME3Q13232 169 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 FAM72AQ5TYM5 149 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 FAM72DQ6L9T8 149 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 FAM72BQ86X60 149 aa17.68■□□□□ 0.42
PDE4A-201ENST00000293683 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDE4A-201ENST00000293683 STX16-NPEPL1H3BU86 382 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 SPTLC1O15269 473 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 ZBTB7AO95365 584 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 PMLP29590 882 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 GLRBP48167 497 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 GLUD2P49448 558 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 ADIGQ0VDE8 80 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 KIZQ2M2Z5 673 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 LSM12Q3MHD2 195 aaKnown RBP17.67■□□□□ 0.42
PDE4A-201ENST00000293683 SPANXN3Q5MJ09 141 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 ARHGAP17Q68EM7 881 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 CLEC14AQ86T13 490 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 SPATA24Q86W54 205 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 DNAAF3Q8N9W5 541 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDE4A-201ENST00000293683 URGCPQ8TCY9 931 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 CDRT15Q96T59 188 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 NAT9Q9BTE0 207 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 NUF2Q9BZD4 464 aa17.67■□□□□ 0.42
PDE4A-201ENST00000293683 VANGL2Q9ULK5 521 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms