RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CCDC81Q6ZN84 652 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 PRELID2Q8N945 189 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 PHF21BQ96EK2 531 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 ZFP42Q96MM3 310 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 TMEM245Q9H330 911 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 MAPRE3Q9UPY8 281 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 MRASO14807 208 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 CPSF4O95639 269 aaKnown RBP13.02□□□□□ -0.32
PTCD1-201ENST00000292478 ATP6V1B2P21281 511 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 PRKCQQ04759 706 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 TMC7Q7Z402 723 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 C11orf96Q7Z7L8 435 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 DDHD1Q8NEL9 900 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 TMEM159Q96B96 161 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 CEP41Q9BYV8 373 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 VAV3Q9UKW4 847 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 LRCH1Q9Y2L9 728 aa13.02□□□□□ -0.32
PTCD1-201ENST00000292478 hCG_1818297A0A087WSY0 165 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 A0A1B0GW55 424 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 EPHB6O15197 1021 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 AMHP03971 560 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 DUX4L2P0CJ85 424 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 DUX4L3P0CJ86 424 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 DUX4L4P0CJ87 422 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 DUX4L5P0CJ88 424 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 DUX4L6P0CJ89 424 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 DUX4L7P0CJ90 424 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 ATP4AP20648 1035 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 ADRA1DP25100 572 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 GRM5P41594 1212 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 XRCC4Q13426 336 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 FRG1Q14331 258 aaKnown RBP13.02□□□□□ -0.33
PTCD1-201ENST00000292478 DUX4Q9UBX2 424 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 OR12D3Q9UGF7 316 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 CCDC154A6NI56 674 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 ZNF839A8K0R7 811 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 TGFB1I1O43294 461 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 NFICP08651 508 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 PCNAP12004 261 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 BDNFP23560 247 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 MAPK8P45983 427 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 BCL2L1Q07817 233 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 KIAA2013Q8IYS2 634 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 RAD21L1Q9H4I0 556 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 FAM124BQ9H5Z6 455 aaPredicted RBP13.02□□□□□ -0.33
PTCD1-201ENST00000292478 NID2Q14112 1375 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 RGS14O43566 566 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 MSCO60682 206 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 RPL22P35268 128 aaKnown RBP13.02□□□□□ -0.33
PTCD1-201ENST00000292478 ARMC12Q5T9G4 340 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 NEPROQ6NW34 567 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 PLEKHM3Q6ZWE6 761 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 MILR1Q7Z6M3 343 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 NKAPQ8N5F7 415 aaKnown RBP13.02□□□□□ -0.33
PTCD1-201ENST00000292478 RDH11Q8TC12 318 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 LHX5Q9H2C1 402 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 POMKQ9H5K3 350 aa13.02□□□□□ -0.33
PTCD1-201ENST00000292478 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.33
PTCD1-201ENST00000292478 ATP9AO75110 1047 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 GJB6O95452 261 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 RPN2P04844 631 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 CLCN5P51795 746 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 MRPS6P82932 125 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 FAM45BPQ6NSW5 357 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 FAM45AQ8TCE6 357 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 SNRNP25Q9BV90 132 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ZC4H2Q9NQZ6 224 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 CATSPERZQ9NTU4 200 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 A0A0B4J269 797 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 DYRK3O43781 588 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 IMPDH2P12268 514 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 EPB42P16452 691 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ACTRT2Q8TDY3 377 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 MAGED4Q96JG8 741 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ZFRQ96KR1 1074 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 TSEN34Q9BSV6 310 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 BIRC5O15392 142 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 SNX3O60493 162 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 SYNCRIPO60506 623 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 CNOT3O75175 753 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ENDOD1O94919 500 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ZNF682O95780 498 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 LTA4HP09960 611 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ITGB5P18084 799 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 DGKAP23743 735 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 PPP2R1BP30154 601 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 RPA3P35244 121 aaPredicted RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 RIPOR1Q6ZS17 1223 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ZNF438Q7Z4V0 828 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 KRT78Q8N1N4 520 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 FNDC5Q8NAU1 212 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 STK32AQ8WU08 396 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 GLIS2Q9BZE0 524 aaPredicted RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 MARCH2Q9P0N8 246 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 EFR3BQ9Y2G0 817 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 LOC102724159A0A0B4J2E5 919 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 TPP1O14773 563 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms