RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ALDH3A1P30838 453 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 CCR1P32246 355 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 SETDB1Q15047 1291 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 FNBP1LQ5T0N5 605 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 HHATQ5VTY9 493 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 MSANTD2Q6P1R3 559 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 ASRGL1Q7L266 308 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 CCDC91Q7Z6B0 441 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 FITM2Q8N6M3 262 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 KCTD15Q96SI1 283 aaPredicted RBP17.25■□□□□ 0.35
CPSF4-201ENST00000292476 CYTH2Q99418 400 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 PAFAH2Q99487 392 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 EPAS1Q99814 870 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 FERMT1Q9BQL6 677 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 CLSTN3Q9BQT9 956 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 VN1R3Q9BXE9 311 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 ARHGEF3Q9NR81 526 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 PAK5Q9P286 719 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 XPO7Q9UIA9 1087 aaKnown RBP17.25■□□□□ 0.35
CPSF4-201ENST00000292476 PHTF1Q9UMS5 762 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 SLC27A5Q9Y2P5 690 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 RWDD3Q9Y3V2 267 aa17.25■□□□□ 0.35
CPSF4-201ENST00000292476 COL4A4P53420 1690 aaPredicted RBP17.24■□□□□ 0.35
CPSF4-201ENST00000292476 A0A1W2PQH9 124 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 EPOPA6NHQ4 379 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 C2CD2LO14523 706 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 IRAK2O43187 625 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 SPAG7O75391 227 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 TMEM63AO94886 807 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 ELF1P32519 619 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 MAGEA6P43360 314 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 PITX1P78337 314 aaPredicted RBP17.24■□□□□ 0.35
CPSF4-201ENST00000292476 RAB33AQ14088 237 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 KCNJ11Q14654 390 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 PPP2R5DQ14738 602 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 C3orf62Q6ZUJ4 267 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 SCD5Q86SK9 330 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 TAC4Q86UU9 113 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 PALM2Q8IXS6 379 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 FBXO36Q8NEA4 188 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
CPSF4-201ENST00000292476 MZB1Q8WU39 189 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 CLP1Q92989 425 aaKnown RBP17.24■□□□□ 0.35
CPSF4-201ENST00000292476 HAPLN3Q96S86 360 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 TKTL2Q9H0I9 626 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 OSBPL2Q9H1P3 480 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 SAE1Q9UBE0 346 aaPredicted RBP17.24■□□□□ 0.35
CPSF4-201ENST00000292476 RAD54BQ9Y620 910 aa17.24■□□□□ 0.35
CPSF4-201ENST00000292476 EEF2KO00418 725 aaKnown RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 CSH1P0DML2 217 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 CSH2P0DML3 217 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 RPA3P35244 121 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 MSH2P43246 934 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 ALDH1A3P47895 512 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 KPNA1P52294 538 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 EIF4EBP2Q13542 120 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 VEPH1Q14D04 833 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 MSS51Q4VC12 460 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 CDKL3Q8IVW4 592 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 ZNF276Q8N554 614 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 PQLC3Q8N755 202 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 FAM71DQ8N9W8 422 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 ADAM32Q8TC27 787 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 DCAKDQ8WVC6 231 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 RMDN2Q96LZ7 410 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 WDR83Q9BRX9 315 aaKnown RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 C17orf80Q9BSJ5 609 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 TTLL2Q9BWV7 592 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 ARHGEF38Q9NXL2 777 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 IQANK1A0A1B0GTG1 560 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 SLC38A8A6NNN8 435 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 HACD1B0YJ81 288 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 GOLGA8MH3BSY2 632 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 H7C0C1 242 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 FGF18O76093 207 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 UNC5CO95185 931 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 GSTA2P09210 222 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 ATP5OP48047 213 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 PPP3CCP48454 512 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 GPR15P49685 360 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 MGAT5Q09328 741 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 SDHAF4Q5VUM1 108 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 DARS2Q6PI48 645 aaKnown RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 C4orf33Q8N1A6 199 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 PAIP2Q9BPZ3 127 aaKnown RBP17.23■□□□□ 0.35
CPSF4-201ENST00000292476 VPS11Q9H270 941 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 NOD2Q9HC29 1040 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 TLR6Q9Y2C9 796 aa17.23■□□□□ 0.35
CPSF4-201ENST00000292476 BCLAF3A2AJT9 711 aaKnown RBP17.22■□□□□ 0.35
CPSF4-201ENST00000292476 NCAM2O15394 837 aa17.22■□□□□ 0.35
CPSF4-201ENST00000292476 CREB3O43889 395 aa17.22■□□□□ 0.35
CPSF4-201ENST00000292476 VNN2O95498 520 aa17.22■□□□□ 0.35
CPSF4-201ENST00000292476 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
CPSF4-201ENST00000292476 FOSL2P15408 326 aa17.22■□□□□ 0.35
CPSF4-201ENST00000292476 GOT1P17174 413 aa17.22■□□□□ 0.35
CPSF4-201ENST00000292476 KRT4P19013 534 aa17.22■□□□□ 0.35
CPSF4-201ENST00000292476 SSTR1P30872 391 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms