RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TMPRSS6Q8IU80 811 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 FRMD1Q8N878 549 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 PRCCQ92733 491 aaPredicted RBP25.85■■□□□ 1.73
PDF-201ENST00000288022 NTAN1Q96AB6 310 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 RPL10LQ96L21 214 aaKnown RBP25.85■■□□□ 1.73
PDF-201ENST00000288022 MRGPRX3Q96LB0 322 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 FEM1AQ9BSK4 669 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 MKRN2Q9H000 416 aaKnown RBP25.85■■□□□ 1.73
PDF-201ENST00000288022 RBSNQ9H1K0 784 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 OSBPL2Q9H1P3 480 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 MRPL47Q9HD33 250 aaKnown RBP25.85■■□□□ 1.73
PDF-201ENST00000288022 CYP8B1Q9UNU6 501 aa25.85■■□□□ 1.73
PDF-201ENST00000288022 TMEM191CA6NGB0 347 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 ZNF217O75362 1048 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 OR1E1P30953 314 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 EIF4A3P38919 411 aaKnown RBP25.84■■□□□ 1.73
PDF-201ENST00000288022 NNMTP40261 264 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 CAMK2GQ13555 558 aaPredicted RBP25.84■■□□□ 1.73
PDF-201ENST00000288022 EFHC2Q5JST6 749 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 CCDC122Q5T0U0 273 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 C6orf118Q5T5N4 469 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 RWDD4Q6NW29 188 aaKnown RBP25.84■■□□□ 1.73
PDF-201ENST00000288022 DRC7Q8IY82 874 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 OR2T3Q8NH03 318 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 SIPA1Q96FS4 1042 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 DNAJC7Q99615 494 aa25.84■■□□□ 1.73
PDF-201ENST00000288022 PPARGC1AQ9UBK2 798 aaKnown RBP25.84■■□□□ 1.73
PDF-201ENST00000288022 AP5Z1O43299 807 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 STK19P49842 368 aaPredicted RBP25.83■■□□□ 1.73
PDF-201ENST00000288022 COPAP53621 1224 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 ALKBH5Q6P6C2 394 aaKnown RBP25.83■■□□□ 1.73
PDF-201ENST00000288022 SETD3Q86TU7 594 aaPredicted RBP25.83■■□□□ 1.73
PDF-201ENST00000288022 KDM1BQ8NB78 822 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 MYO19Q96H55 970 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 LOXL4Q96JB6 756 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 MAGEB5Q9BZ81 275 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 TRIM7Q9C029 511 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 DEF6Q9H4E7 631 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 MTG2Q9H4K7 406 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 PRSS16Q9NQE7 514 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 ABHD10Q9NUJ1 306 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 SLCO3A1Q9UIG8 710 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 MBD1Q9UIS9 605 aaPredicted RBP25.83■■□□□ 1.73
PDF-201ENST00000288022 SLC25A13Q9UJS0 675 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 CKAP5Q14008 2032 aa25.83■■□□□ 1.73
PDF-201ENST00000288022 TTC34A8MYJ7 566 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 FAM72CH0Y354 149 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 MFAP3LO75121 409 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 ACADMP11310 421 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 ADKP55263 362 aaKnown RBP25.82■■□□□ 1.72
PDF-201ENST00000288022 NRG1Q02297 640 aaPredicted RBP25.82■■□□□ 1.72
PDF-201ENST00000288022 SPEM2Q0P670 501 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 SCAPQ12770 1279 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 FAM72AQ5TYM5 149 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 PMS2CLQ68D20 193 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 FAM72DQ6L9T8 149 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 LPCAT2Q7L5N7 544 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 FAM72BQ86X60 149 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 TBC1D31Q96DN5 1066 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 ALG14Q96F25 216 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 THAP2Q9H0W7 228 aa25.82■■□□□ 1.72
PDF-201ENST00000288022 RNF8O76064 485 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 LRIG2O94898 1065 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 DHPSP49366 369 aaPredicted RBP25.81■■□□□ 1.72
PDF-201ENST00000288022 AIF1P55008 147 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 KRT83P78385 493 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 HNRNPA1L2Q32P51 320 aaKnown RBP25.81■■□□□ 1.72
PDF-201ENST00000288022 MANEALQ5VSG8 457 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 SLC36A4Q6YBV0 504 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 KIAA2013Q8IYS2 634 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 PYROXD2Q8N2H3 581 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 ARRDC1-AS1Q9H2J1 176 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 FBRSQ9HAH7 460 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 CD93Q9NPY3 652 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 FZD10Q9ULW2 581 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 USP18Q9UMW8 372 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 OR51B4Q9Y5P0 310 aa25.81■■□□□ 1.72
PDF-201ENST00000288022 PIEZO1Q92508 2521 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 IGHV1OR15-9A0A0B4J2B8 117 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 EDDM13A0A1B0GTR0 161 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 SIN3BO75182 1162 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 EPN2O95208 641 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 RPL6Q02878 288 aaKnown RBP25.8■■□□□ 1.72
PDF-201ENST00000288022 GFPT1Q06210 699 aaPredicted RBP25.8■■□□□ 1.72
PDF-201ENST00000288022 ZNF252P-AS1Q0IIN9 211 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 ARTNQ5T4W7 220 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 CNGA4Q8IV77 575 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 TMEFF1Q8IYR6 380 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 FNIP1Q8TF40 1166 aa25.8■■□□□ 1.72
PDF-201ENST00000288022 C2orf49Q9BVC5 232 aaPredicted RBP25.8■■□□□ 1.72
PDF-201ENST00000288022 PLXND1Q9Y4D7 1925 aa25.79■■□□□ 1.72
PDF-201ENST00000288022 A0A0D9SEW6 157 aa25.79■■□□□ 1.72
PDF-201ENST00000288022 AKR1B15C9JRZ8 316 aaPredicted RBP25.79■■□□□ 1.72
PDF-201ENST00000288022 CREB3O43889 395 aa25.79■■□□□ 1.72
PDF-201ENST00000288022 RHOQP17081 205 aa25.79■■□□□ 1.72
PDF-201ENST00000288022 CREB5Q02930 508 aa25.79■■□□□ 1.72
PDF-201ENST00000288022 ARID5BQ14865 1188 aa25.79■■□□□ 1.72
PDF-201ENST00000288022 ACCSLQ4AC99 568 aa25.79■■□□□ 1.72
PDF-201ENST00000288022 ARMCX6Q7L4S7 300 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms