RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 AMHP03971 560 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 FAXCQ5TGI0 409 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 TMCO4Q5TGY1 634 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 PRPF39Q86UA1 669 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 LRRTM3Q86VH5 581 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 ZNF280BQ86YH2 543 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 CRLF3Q8IUI8 442 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 TMEM86AQ8N2M4 240 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 PPM1NQ8N819 430 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 FBXO27Q8NI29 283 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 MYLPFQ96A32 169 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 NRDE2Q9H7Z3 1164 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 SLC7A8Q9UHI5 535 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 M0QYT0 321 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 KCNN4O15554 427 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 PRKCHP24723 683 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 DPYSL2Q16555 572 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 SLC25A52Q3SY17 297 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 SLC9A4Q6AI14 798 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 RFX8Q6ZV50 586 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 ADGRG6Q86SQ4 1221 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 ZNF598Q86UK7 904 aaKnown RBP18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 CTAGE3PQ8IX95 158 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 OR10T2Q8NGX3 314 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 FAF2Q96CS3 445 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 MTBPQ96DY7 904 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 CFAP36Q96G28 342 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 THTPAQ9BU02 230 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 USP29Q9HBJ7 922 aa18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 ZNF638Q14966 1978 aaKnown RBP18.77■□□□□ 0.6
PDLIM3-201ENST00000284767 SERPINA6P08185 405 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 UBTFL6P0CB48 400 aaPredicted RBP18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 DESP17661 470 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 BDNFP23560 247 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 HOXD10P28358 340 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 AQP5P55064 265 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 KDSRQ06136 332 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 TUSC3Q13454 348 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 CHI3L2Q15782 390 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 FAM26DQ5JW98 314 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 C1orf146Q5VVC0 180 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 NUDCD3Q8IVD9 361 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 KCTD13Q8WZ19 329 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 ZNF670Q9BS34 389 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 MECRQ9BV79 373 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 DNAI2Q9GZS0 605 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 PIGVQ9NUD9 493 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 IL1RAPL1Q9NZN1 696 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 PAK5Q9P286 719 aa18.77■□□□□ 0.59
PDLIM3-201ENST00000284767 BIRC5O15392 142 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 SNNO75324 88 aaPredicted RBP18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 SCNN1AP37088 669 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 WASHC5Q12768 1159 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 DYNC1I2Q13409 638 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 AAGABQ6PD74 315 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 CCNJLQ8IV13 435 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 PPP2R3CQ969Q6 453 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 CSPG4P5Q96PW8 444 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 SIKE1Q9BRV8 207 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 ANLNQ9NQW6 1124 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 STARD7Q9NQZ5 370 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 CDH9Q9ULB4 789 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 HBS1LQ9Y450 684 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 DAB1O75553 588 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 RFPL1O75677 317 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 KRT38O76015 456 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 DDHD2O94830 711 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 ODC1P11926 461 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 ARCQ7LC44 396 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 EDEM1Q92611 657 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 AZIN2Q96A70 460 aa18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 ZC3H7BQ9UGR2 993 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-201ENST00000284767 I6L893 689 aaPredicted RBP18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 RPLP2P05387 115 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 OR4Q2P0C623 313 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 STRADAQ7RTN6 431 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 SLC7A14Q8TBB6 771 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 RSPH1Q8WYR4 309 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 PGBD4Q96DM1 585 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 NPY6RQ99463 290 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 POPDC2Q9HBU9 364 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 LAMA2P24043 3122 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 HHLA1C9JL84 531 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 AVILO75366 819 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 CABYRO75952 493 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 AOC1P19801 751 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 DAOAP59103 153 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 CDC16Q13042 620 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 HNRNPDQ14103 355 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 DBN1Q16643 649 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 CLLU1OSQ5K130 101 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 CLPTM1LQ96KA5 538 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 FZD10Q9ULW2 581 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 SOX13Q9UN79 622 aa18.75■□□□□ 0.59
PDLIM3-201ENST00000284767 NOS2P35228 1153 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 IFRD2Q12894 506 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 CES4AQ5XG92 561 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 STKLD1Q8NE28 680 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 LRRC39Q96DD0 335 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms