RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 RPS24P62847 133 aaKnown RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ZXDBP98169 803 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 C9orf50Q5SZB4 431 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ZNF534Q76KX8 674 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 RBM23Q86U06 439 aaKnown RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 CHSY1Q86X52 802 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 SCML4Q8N228 414 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 FBF1Q8TES7 1133 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 SPATA17Q96L03 361 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 KLF6Q99612 283 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 TCF25Q9BQ70 676 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 GORASP1Q9BQQ3 440 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 FAM107BQ9H098 131 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 HCFC1R1Q9NWW0 138 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 BACE2Q9Y5Z0 518 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 FAM92AA1XBS5 289 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 ALOX15BO15296 676 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 UGT1A9O60656 530 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 RFPL2O75678 378 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 ATP2A2P16615 1042 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 NFKB1P19838 968 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 GCAP28676 217 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 SLC6A4P31645 630 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 CTNNB1P35222 781 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 IRS1P35568 1242 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 PAPOLAP51003 745 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 LRRC14Q15048 493 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 DDX53Q86TM3 631 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 CMTR2Q8IYT2 770 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 CNTD1Q8N815 330 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 OR52K2Q8NGK3 314 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 TBC1D31Q96DN5 1066 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 FAM210AQ96ND0 272 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 OSBPL2Q9H1P3 480 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 NOL6Q9H6R4 1146 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 UGT1A7Q9HAW7 530 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 UGT1A10Q9HAW8 530 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 UGT1A8Q9HAW9 530 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 VCANP13611 3396 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 C5orf60A6NFR6 353 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 ATP5C1P36542 298 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 XRCC4Q13426 336 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 PPP2R5DQ14738 602 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 BRMS1LQ5PSV4 323 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 TRMT10BQ6PF06 316 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 UBE2Q1Q7Z7E8 422 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 PCGF5Q86SE9 256 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 TMEM150AQ86TG1 271 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 LGI2Q8N0V4 545 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 ARL14EPQ8N8R7 260 aaPredicted RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 OR52K1Q8NGK4 314 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 PABPC5Q96DU9 382 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 RTP4Q96DX8 246 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 HAPLN3Q96S86 360 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 C12orf65Q9H3J6 166 aaKnown RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 ENTPD7Q9NQZ7 604 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.25□□□□□ -0.61
GGPS1-201ENST00000282841 INSL5Q9Y5Q6 135 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 SLC4A7Q9Y6M7 1214 aa11.25□□□□□ -0.61
GGPS1-201ENST00000282841 ALPK3Q96L96 1907 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 GOLGA8RI6L899 631 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 CCL16O15467 120 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 ACVRL1P37023 503 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 GNGT1P63211 74 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 VSIG1Q86XK7 387 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 HERC6Q8IVU3 1022 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 SRRM1Q8IYB3 904 aaKnown RBP11.24□□□□□ -0.61
GGPS1-201ENST00000282841 DPF3Q92784 378 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 HMCESQ96FZ2 354 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 PLAC1Q9HBJ0 212 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 CFAP69A5D8W1 941 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 ZNF487B1APH4 448 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 SPAG7O75391 227 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 MGAT1P26572 445 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 SEC24CP53992 1094 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 TRIP4Q15650 581 aaPredicted RBP11.24□□□□□ -0.61
GGPS1-201ENST00000282841 MANEALQ5VSG8 457 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 PPP1R21Q6ZMI0 780 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 RNF135Q8IUD6 432 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 ATPAF2Q8N5M1 289 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 MAB21L3Q8N8X9 362 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 XPO6Q96QU8 1125 aaKnown RBP11.24□□□□□ -0.61
GGPS1-201ENST00000282841 UBE2OQ9C0C9 1292 aaKnown RBP11.24□□□□□ -0.61
GGPS1-201ENST00000282841 CLIC5Q9NZA1 410 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 LTBP2Q14767 1821 aa11.24□□□□□ -0.61
GGPS1-201ENST00000282841 CXorf49A8MYA2 514 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ZDHHC11BP0C7U3 371 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 IFNAR2P48551 515 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 AIF1P55008 147 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PPIDQ08752 370 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 GALNT2Q10471 571 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 RAB33AQ14088 237 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PCSK7Q16549 785 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 HECTD3Q5T447 861 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 MSANTD2Q6P1R3 559 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 EXOC3L1Q86VI1 746 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms