RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ITGADQ13349 1161 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 DPYSL3Q14195 570 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 PHKG1Q16816 387 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 FGD3Q5JSP0 725 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 PRAMEF18Q5VWM3 479 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 SLC15A4Q8N697 577 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 KYQ8NBH2 561 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 PCYOX1LQ8NBM8 494 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 ZNF420Q8TAQ5 688 aaPredicted RBP13.41□□□□□ -0.26
NUP54-201ENST00000264883 TRUB1Q8WWH5 349 aaKnown RBP13.41□□□□□ -0.26
NUP54-201ENST00000264883 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 KLHL32Q96NJ5 620 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 LENG8Q96PV6 779 aaPredicted RBP13.41□□□□□ -0.26
NUP54-201ENST00000264883 CXorf21Q9HAI6 301 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 CYP26B1Q9NR63 512 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 ADARB2Q9NS39 739 aaKnown RBP13.41□□□□□ -0.26
NUP54-201ENST00000264883 EIF3FO00303 357 aaPredicted RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 ZNF195O14628 629 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 EIF2S1P05198 315 aaKnown RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 KCNA4P22459 653 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 KDELR1P24390 212 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 PSMA2P25787 234 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 GABRB2P47870 512 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 PKNOX1P55347 436 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 TRPC3Q13507 836 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 KCNJ8Q15842 424 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 PPP6R3Q5H9R7 873 aaPredicted RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 MROH9Q5TGP6 573 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 EEPD1Q7L9B9 569 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 DSELQ8IZU8 1212 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 FAM71DQ8N9W8 422 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 RMDN3Q96TC7 470 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 SEMA6AQ9H2E6 1030 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 SLC38A10Q9HBR0 1119 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 SLC9A2Q9UBY0 812 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 VPS28Q9UK41 221 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 SPO11Q9Y5K1 396 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 PHIPQ8WWQ0 1821 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 PTPRJQ12913 1337 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 KPNA4O00629 521 aaPredicted RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 CFLARO15519 480 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 KLHL41O60662 606 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 ASS1P00966 412 aaKnown RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 NAMPTP43490 491 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 EIF3EP60228 445 aaKnown RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 ARHGEF16Q5VV41 709 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 GPR107Q5VW38 600 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 RNF148Q8N7C7 305 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 SREK1Q8WXA9 508 aaKnown RBP13.4□□□□□ -0.26
NUP54-201ENST00000264883 SORT1Q99523 831 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 MSTO1Q9BUK6 570 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 B3GNT3Q9Y2A9 372 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 CORINQ9Y5Q5 1042 aa13.4□□□□□ -0.26
NUP54-201ENST00000264883 CNTNAP2Q9UHC6 1331 aa13.4□□□□□ -0.27
NUP54-201ENST00000264883 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 PLOD2O00469 737 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 BCAS2O75934 225 aaPredicted RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 GSRP00390 522 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 SERPINE1P05121 402 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 ME2P23368 584 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 RPL10P27635 214 aaKnown RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 RCVRNP35243 200 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 SERPINB5P36952 375 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 IREB2P48200 963 aaKnown RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 ACOT2P49753 483 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 DMPKQ09013 629 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 CEACAM7Q14002 265 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 SURF1Q15526 300 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 NDUFA5Q16718 116 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 XKR3Q5GH77 459 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 IL23RQ5VWK5 629 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 USP13Q92995 863 aaPredicted RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 LRRC39Q96DD0 335 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 KLRG1Q96E93 195 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 DOK1Q99704 481 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 TDRD1Q9BXT4 1180 aaKnown RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 ANKRD60Q9BZ19 345 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 NIF3L1Q9GZT8 377 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 LHX5Q9H2C1 402 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 EHD1Q9H4M9 534 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 TMEM134Q9H6X4 195 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 RSAD1Q9HA92 442 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 SMYD2Q9NRG4 433 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 ZC3H7BQ9UGR2 993 aaKnown RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 SEPT9Q9UHD8 586 aaPredicted RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 PAPPA2Q9BXP8 1791 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 MED7O43513 233 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 DGKIO75912 1065 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 CSH1P0DML2 217 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 CSH2P0DML3 217 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 PRKCHP24723 683 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms