RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 NUDT5Q9UKK9 219 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 ERCC2P18074 760 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 JAG1P78504 1218 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 NEPROQ6NW34 567 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 POLR1EQ9GZS1 481 aaKnown RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 NFKB1P19838 968 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 PPP3CCP48454 512 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 PEX5P50542 639 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 WLSQ5T9L3 541 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 TTC30AQ86WT1 665 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 CEP19Q96LK0 163 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 FAM105AQ9NUU6 356 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 TAS2R13Q9NYV9 303 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 SORCS3Q9UPU3 1222 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 PEX10O60683 326 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 UNGP13051 313 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 ELF3P78545 371 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 AGKQ53H12 422 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 DEFB128Q7Z7B8 93 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 RNF168Q8IYW5 571 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 PIWIL2Q8TC59 973 aaKnown RBP17.05■□□□□ 0.32
PHRF1-201ENST00000264555 LPPQ93052 612 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 TMEM109Q9BVC6 243 aa17.05■□□□□ 0.32
PHRF1-201ENST00000264555 FAM95CA0A1B0GW59 222 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 CLDN5O00501 218 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 CCNB1P14635 433 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 PTGIRP43119 386 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 GALNTL6Q49A17 601 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 UNC5AQ6ZN44 842 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 FAM35AQ86V20 835 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 PACS2Q86VP3 889 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 SLC4A11Q8NBS3 891 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 YME1L1Q96TA2 773 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 BLOC1S6Q9UL45 172 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 UNC5CO95185 931 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 ARCQ7LC44 396 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 CATSPER2Q96P56 530 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 HMX1Q9NP08 348 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-201ENST00000264555 SEPT3Q9UH03 358 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 KANSL1LA0AUZ9 987 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 APLFQ8IW19 511 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-201ENST00000264555 FAM9CQ8IZT9 166 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 THUMPD3Q9BV44 507 aaKnown RBP17.04■□□□□ 0.32
PHRF1-201ENST00000264555 FKBP9O95302 570 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 TRIM16O95361 564 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 PLOD1Q02809 727 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-201ENST00000264555 FKBP9P1Q75LS8 142 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 RCOR3Q9P2K3 495 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-201ENST00000264555 UBA2Q9UBT2 640 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-201ENST00000264555 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 DCLRE1AQ6PJP8 1040 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 TMC7Q7Z402 723 aa17.04■□□□□ 0.32
PHRF1-201ENST00000264555 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 AGPSO00116 658 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 PIGRP01833 764 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 ZNF536O15090 1300 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 E7ENQ6 273 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 SLC34A1Q06495 639 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 GRIK3Q13003 919 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 NFYCQ13952 458 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 SPDYE7PQ495Y7 208 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 KLHL4Q9C0H6 718 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 FZD8Q9H461 694 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 C5orf58C9J3I9 102 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 NR5A2O00482 541 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 AVILO75366 819 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 PSEN1P49768 467 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 FUT11Q495W5 492 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 C16orf87Q6PH81 154 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 LRRC15Q8TF66 581 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 FAM32AQ9Y421 112 aaKnown RBP17.03■□□□□ 0.32
PHRF1-201ENST00000264555 CD52P31358 61 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 RPL14P50914 215 aaKnown RBP17.03■□□□□ 0.32
PHRF1-201ENST00000264555 NME5P56597 212 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 MSLNQ13421 630 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-201ENST00000264555 HIST2H2ACQ16777 129 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-201ENST00000264555 HIST2H2AA3Q6FI13 130 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 TAGAPQ8N103 731 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 FBXO39Q8N4B4 442 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 TFAP2BQ92481 460 aa17.03■□□□□ 0.32
PHRF1-201ENST00000264555 BIRC5O15392 142 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 PHGDHO43175 533 aaKnown RBP17.02■□□□□ 0.32
PHRF1-201ENST00000264555 MSCO60682 206 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 PQBP1O60828 265 aaKnown RBP17.02■□□□□ 0.32
PHRF1-201ENST00000264555 BTKQ06187 659 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 PKN3Q6P5Z2 889 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 GLT6D1Q7Z4J2 308 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 NR2E1Q9Y466 385 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 TSPAN3O60637 253 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 VNN1O95497 513 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 RIN3Q8TB24 985 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 PPP1R10Q96QC0 940 aaKnown RBP17.02■□□□□ 0.32
PHRF1-201ENST00000264555 CHCHD3Q9NX63 227 aaKnown RBP17.02■□□□□ 0.32
PHRF1-201ENST00000264555 UXTQ9UBK9 157 aaPredicted RBP17.02■□□□□ 0.32
PHRF1-201ENST00000264555 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms