RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 PABPC1P11940 636 aaKnown RBP17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 DRD1P21728 446 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 AMPD1P23109 780 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 GRSF1Q12849 480 aaKnown RBP eCLIP17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 SLC12A1Q13621 1099 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 TAZQ16635 292 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 GEN1Q17RS7 908 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 ZNF569Q5MCW4 686 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 FSTL4Q6MZW2 842 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 MFSD7Q6UXD7 560 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 ANKS1BQ7Z6G8 1248 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 UMODL1-AS1Q8N2C9 162 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 PCDH19Q8TAB3 1148 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 EZH1Q92800 747 aaPredicted RBP17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 ALG14Q96F25 216 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 RNF157Q96PX1 679 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 NELL2Q99435 816 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 TBC1D17Q9HA65 648 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 INTS6Q9UL03 887 aaKnown RBP17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 MRPS17Q9Y2R5 130 aaKnown RBP17.07■□□□□ 0.32
CHCHD3-201ENST00000262570 PRRT4C9JH25 899 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 TNFRSF10AO00220 468 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 MZF1P28698 734 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 CSKP41240 450 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 CDKN2BP42772 138 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 PLK1P53350 603 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 CCINQ13939 588 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 PLEKHG6Q3KR16 790 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 TMEM215Q68D42 235 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 ZNF783Q6ZMS7 281 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 NUDT18Q6ZVK8 323 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 ADIPOR2Q86V24 386 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 SFTPA1Q8IWL2 248 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 AHI1Q8N157 1196 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 C17orf53Q8N3J3 647 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 RBM41Q96IZ5 413 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 FEM1AQ9BSK4 669 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 ETNK2Q9NVF9 386 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 NDRG2Q9UN36 371 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 ZKSCAN5Q9Y2L8 839 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 OR51B4Q9Y5P0 310 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 TECTAO75443 2155 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 A0A0D9SEW6 157 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 K7EQS6 105 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 EGFP01133 1207 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 TNFRSF4P43489 277 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 COPS2P61201 443 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 GNA12Q03113 381 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 FZD5Q13467 585 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 RPS6KA1Q15418 735 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 FUT11Q495W5 492 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 RNF219Q5W0B1 726 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 SPOCD1Q6ZMY3 1216 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 APCDD1Q8J025 514 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 PQLC3Q8N755 202 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 WFIKKN2Q8TEU8 576 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 TLR10Q9BXR5 811 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 FOXQ1Q9C009 403 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 NOL6Q9H6R4 1146 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 MTF2Q9Y483 593 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 JRKLQ9Y4A0 524 aa17.06■□□□□ 0.32
CHCHD3-201ENST00000262570 RAMP2O60895 175 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 PYGMP11217 842 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 CHRNB1P11230 501 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 YBEYP58557 167 aaPredicted RBP17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 DMC1Q14565 340 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 UBXN2BQ14CS0 331 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 TFDP3Q5H9I0 405 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 PITRM1Q5JRX3 1037 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 TMCO3Q6UWJ1 677 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 SLC35F6Q8N357 371 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 LZTR1Q8N653 840 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 NPWQ8N729 165 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 OSBPL6Q9BZF3 934 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 MUC3BQ9H195 1237 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 MAGEH1Q9H213 219 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 LRRC19Q9H756 370 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 ELOVL2Q9NXB9 296 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 STARD13Q9Y3M8 1113 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 MFHAS1Q9Y4C4 1052 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 KIAA1549LQ6ZVL6 1849 aa17.05■□□□□ 0.32
CHCHD3-201ENST00000262570 hCG_1818297A0A087WSY0 165 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 TMEM221A6NGB7 291 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 FAM170BA6NMN3 283 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 M0R296 226 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 TIMM44O43615 452 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 PDGFBP01127 241 aaPredicted RBP17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 DNA2P51530 1060 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 NDST2P52849 883 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 POLD3Q15054 466 aaPredicted RBP17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 EIF4HQ15056 248 aaKnown RBP17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 PPP2R5EQ16537 467 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 FBXO43Q4G163 708 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 DCAF12L1Q5VU92 463 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms