RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 C17orf50Q8WW18 174 aa14.09□□□□□ -0.15
TARDBP-201ENST00000240185 SIPA1Q96FS4 1042 aa14.09□□□□□ -0.15
TARDBP-201ENST00000240185 NT5MQ9NPB1 228 aa14.09□□□□□ -0.15
TARDBP-201ENST00000240185 PCDHA3Q9Y5H8 950 aa14.09□□□□□ -0.15
TARDBP-201ENST00000240185 CLASP1Q7Z460 1538 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 FAM25EA8MYX2 175 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 F5H5T6 163 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 IFRD1O00458 451 aaPredicted RBP14.08□□□□□ -0.15
TARDBP-201ENST00000240185 CES2O00748 559 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 NPTXRO95502 500 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 PRLP01236 227 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 CHRNGP07510 517 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 RARAP10276 462 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 MGAT1P26572 445 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 PSME3P61289 254 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 SPDYCQ5MJ68 293 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 MTSS1LQ765P7 747 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 ACOT1Q86TX2 421 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 MEIOBQ8N635 442 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 PIGBQ92521 554 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 TIMMDC1Q9NPL8 285 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 GGA3Q9NZ52 723 aa14.08□□□□□ -0.15
TARDBP-201ENST00000240185 ZNF609O15014 1411 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 AP5Z1O43299 807 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 CYP1A1P04798 512 aaPredicted RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 COX4I1P13073 169 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 PRG2P13727 222 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 NELFEP18615 380 aaKnown RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 CYP2F1P24903 491 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 NAA20P61599 178 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 SEZ6Q53EL9 994 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 C16orf46Q6P387 395 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 AMIGO2Q86SJ2 522 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 MIB1Q86YT6 1006 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.165e-8■■■■■ 204.6
TARDBP-201ENST00000240185 RXFP2Q8WXD0 754 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 Q96MT0 163 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 SLC35C2Q9NQQ7 365 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 PIH1D1Q9NWS0 290 aaKnown RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ZMYM5Q9UJ78 669 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 KIAA1257Q9ULG3 409 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 EFR3BQ9Y2G0 817 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 SRRM3A6NNA2 597 aaPredicted RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 MDM4O15151 490 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ENDOD1O94919 500 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ZBTB11O95625 1053 aaPredicted RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 CAPGP40121 348 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 NUMBP49757 651 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 FNBP1LQ5T0N5 605 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ZNF470Q6ECI4 717 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 SEPT12Q8IYM1 358 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 PIK3C3Q8NEB9 887 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 REXO5Q96IC2 774 aaKnown RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ANKEF1Q9NU02 776 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 KDM5CP41229 1560 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ABLIM1O14639 778 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 SPTLC1O15269 473 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.161e-7■■□□□ 12
TARDBP-201ENST00000240185 KCNH1O95259 989 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 OXCT1P55809 520 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 CDKAL1Q5VV42 579 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 IER5Q5VY09 327 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 DEPDC4Q8N2C3 294 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 MASTLQ96GX5 879 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 CCDC115Q96NT0 180 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ASB2Q96Q27 587 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 FAM129BQ96TA1 746 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 CEP41Q9BYV8 373 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 TTYH1Q9H313 450 aaPredicted RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 SP140LQ9H930 580 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 TBC1D13Q9NVG8 400 aa14.08□□□□□ -0.16
TARDBP-201ENST00000240185 ABI2Q9NYB9 513 aaPredicted RBP14.08□□□□□ -0.16
TARDBP-201ENST00000240185 FAM240BA0A1B0GVZ2 78 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 FAM47E-STBD1D6RA91 191 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TSPAN3O60637 253 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TRIM3O75382 744 aaPredicted RBP14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TCEA3O75764 348 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 NDUFB10O96000 172 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 DLG4P78352 724 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 CARTPTQ16568 116 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 SPANXN3Q5MJ09 141 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 RUSC1Q9BVN2 902 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 SEMA6BQ9H3T3 888 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 SPAG4Q9NPE6 437 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 SSR3Q9UNL2 185 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 COG5Q9UP83 839 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 CNTNAP5Q8WYK1 1306 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TRIM38O00635 465 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 RGS14O43566 566 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 MGRN1O60291 552 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 ITGB6P18564 788 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 CBWD3Q5JTY5 395 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 CBWD5Q5RIA9 395 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 PHACTR4Q8IZ21 702 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 OR8H1Q8NGG4 311 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 MED8Q96G25 268 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 MXRA8Q9BRK3 442 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 DPP3Q9NY33 737 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 TAS2R13Q9NYV9 303 aa14.07□□□□□ -0.16
TARDBP-201ENST00000240185 IRAK3Q9Y616 596 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms