RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 MAP7D3Q8IWC1 876 aa27.37■■□□□ 1.97
STUB1-201ENST00000219548 SUGP1Q8IWZ8 645 aaKnown RBP27.37■■□□□ 1.97
STUB1-201ENST00000219548 KATNAL2Q8IYT4 538 aa27.37■■□□□ 1.97
STUB1-201ENST00000219548 C17orf53Q8N3J3 647 aaPredicted RBP27.37■■□□□ 1.97
STUB1-201ENST00000219548 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.37■■□□□ 1.97
STUB1-201ENST00000219548 INTS6Q9UL03 887 aaKnown RBP27.37■■□□□ 1.97
STUB1-201ENST00000219548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.37■■□□□ 1.97
STUB1-201ENST00000219548 CCDC66A2RUB6 948 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 C3orf70A6NLC5 250 aaPredicted RBP27.36■■□□□ 1.97
STUB1-201ENST00000219548 FAM170BA6NMN3 283 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 K7EQS6 105 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 MAPKAPK2P49137 400 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 CCINQ13939 588 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 FUT11Q495W5 492 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 PREPLQ4J6C6 727 aaPredicted RBP27.36■■□□□ 1.97
STUB1-201ENST00000219548 C6orf118Q5T5N4 469 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 RNF219Q5W0B1 726 aaPredicted RBP27.36■■□□□ 1.97
STUB1-201ENST00000219548 TMEM215Q68D42 235 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 SETD3Q86TU7 594 aaPredicted RBP27.36■■□□□ 1.97
STUB1-201ENST00000219548 APCDD1Q8J025 514 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 TRIM58Q8NG06 486 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 ZNF670Q9BS34 389 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 ETNK2Q9NVF9 386 aa27.36■■□□□ 1.97
STUB1-201ENST00000219548 RCOR3Q9P2K3 495 aaPredicted RBP27.36■■□□□ 1.97
STUB1-201ENST00000219548 NYNRINQ9P2P1 1898 aaKnown RBP27.36■■□□□ 1.97
STUB1-201ENST00000219548 A0A0D9SEW6 157 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 WASH4PA8MWX3 477 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 SEC13P55735 322 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 ANKRD20A8PQ5CZ79 823 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 CWF19L1Q69YN2 538 aaKnown RBP27.35■■□□□ 1.97
STUB1-201ENST00000219548 KIAA0907Q7Z7F0 614 aaPredicted RBP27.35■■□□□ 1.97
STUB1-201ENST00000219548 ADIPOR2Q86V24 386 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 AHI1Q8N157 1196 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 PJA1Q8NG27 643 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 ALG3Q92685 438 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 MUC3BQ9H195 1237 aa27.35■■□□□ 1.97
STUB1-201ENST00000219548 DCLK1O15075 740 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 PEX5P50542 639 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 PLEKHG6Q3KR16 790 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 PITRM1Q5JRX3 1037 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 MFSD7Q6UXD7 560 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 CCDC105Q8IYK2 499 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 NETO2Q8NC67 525 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 OR7D4Q8NG98 312 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 PCDH19Q8TAB3 1148 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 FAF2Q96CS3 445 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 HES6Q96HZ4 224 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 CIPCQ9C0C6 399 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 RETREG1Q9H6L5 497 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 NOL6Q9H6R4 1146 aaKnown RBP27.34■■□□□ 1.97
STUB1-201ENST00000219548 ZDHHC4Q9NPG8 344 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 SHROOM3Q8TF72 1996 aa27.34■■□□□ 1.97
STUB1-201ENST00000219548 A0A0A0MRY4 1105 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 MIF4GDA9UHW6 222 aaKnown RBP27.33■■□□□ 1.97
STUB1-201ENST00000219548 DDX3YO15523 660 aaKnown RBP27.33■■□□□ 1.97
STUB1-201ENST00000219548 CHRNB1P11230 501 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 LLGL1Q15334 1064 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 EMC10Q5UCC4 262 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 CCDC50Q8IVM0 306 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 NPWQ8N729 165 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 WFIKKN2Q8TEU8 576 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 SORCS1Q8WY21 1168 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 ALG14Q96F25 216 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 NELL2Q99435 816 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 FEM1AQ9BSK4 669 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 LMAN1LQ9HAT1 526 aa27.33■■□□□ 1.97
STUB1-201ENST00000219548 MUC22E2RYF6 1773 aaPredicted RBP27.33■■□□□ 1.97
STUB1-201ENST00000219548 ILVBLA1L0T0 632 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 GOLGA6L9A6NEM1 432 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 ZRANB2O95218 330 aaKnown RBP eCLIP27.32■■□□□ 1.96
STUB1-201ENST00000219548 OXCT1P55809 520 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 RWDD2BP57060 319 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 GNA12Q03113 381 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 FZD5Q13467 585 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 MEI1Q5TIA1 1274 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 MBLAC2Q68D91 279 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 SPOCD1Q6ZMY3 1216 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 NUDT18Q6ZVK8 323 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 UBL4BQ8N7F7 174 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 EXD1Q8NHP7 514 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 TRIM44Q96DX7 344 aaPredicted RBP27.32■■□□□ 1.96
STUB1-201ENST00000219548 CELF6Q96J87 481 aaKnown RBP27.32■■□□□ 1.96
STUB1-201ENST00000219548 KLC2Q9H0B6 622 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 VPS28Q9UK41 221 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 OR51B4Q9Y5P0 310 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 RAMP2O60895 175 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 RNF40O75150 1001 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 ACVRL1P37023 503 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 CDKN2BP42772 138 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 TNFRSF4P43489 277 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 SLC12A1Q13621 1099 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 ZNF569Q5MCW4 686 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 TMCO3Q6UWJ1 677 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 Q6ZS52 159 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 PQLC3Q8N755 202 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 RBM41Q96IZ5 413 aaKnown RBP27.32■■□□□ 1.96
STUB1-201ENST00000219548 RNF157Q96PX1 679 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 ELOVL2Q9NXB9 296 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 HCN2Q9UL51 889 aa27.32■■□□□ 1.96
STUB1-201ENST00000219548 SIT1Q9Y3P8 196 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms