RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
PHGDH-208ENST00000641023 ACEP12821 1306 aa22.77■■□□□ 1.24
PHGDH-208ENST00000641023 AKAP12Q02952 1782 aa22.77■■□□□ 1.23
PHGDH-208ENST00000641023 NME9Q86XW9 330 aa22.77■■□□□ 1.23
PHGDH-208ENST00000641023 COG3Q96JB2 828 aa22.77■■□□□ 1.23
PHGDH-208ENST00000641023 TOPAZ1Q8N9V7 1692 aa22.76■■□□□ 1.23
PHGDH-208ENST00000641023 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
PHGDH-208ENST00000641023 POLKQ9UBT6 870 aa22.73■■□□□ 1.23
PHGDH-208ENST00000641023 NPHP4O75161 1426 aaPredicted RBP22.73■■□□□ 1.23
PHGDH-208ENST00000641023 DIAPH1O60610 1272 aaKnown RBP22.73■■□□□ 1.23
PHGDH-208ENST00000641023 COL3A1P02461 1466 aaPredicted RBP22.72■■□□□ 1.23
PHGDH-208ENST00000641023 CHD2O14647 1828 aaKnown RBP22.72■■□□□ 1.23
PHGDH-208ENST00000641023 AATKQ6ZMQ8 1374 aa22.72■■□□□ 1.23
PHGDH-208ENST00000641023 TTC21BQ7Z4L5 1316 aa22.72■■□□□ 1.23
PHGDH-208ENST00000641023 U2SURPO15042 1029 aaKnown RBP22.72■■□□□ 1.23
PHGDH-208ENST00000641023 TCP11L2Q8N4U5 519 aa22.72■■□□□ 1.23
PHGDH-208ENST00000641023 PPP4R2Q9NY27 417 aa22.72■■□□□ 1.23
PHGDH-208ENST00000641023 USP6P35125 1406 aa22.71■■□□□ 1.23
PHGDH-208ENST00000641023 SLFN5Q08AF3 891 aa22.71■■□□□ 1.23
PHGDH-208ENST00000641023 DUSP27Q5VZP5 1158 aa22.71■■□□□ 1.23
PHGDH-208ENST00000641023 NKTRP30414 1462 aaKnown RBP22.7■■□□□ 1.22
PHGDH-208ENST00000641023 ANKARQ7Z5J8 1434 aa22.7■■□□□ 1.22
PHGDH-208ENST00000641023 PPM1GO15355 546 aaPredicted RBP22.7■■□□□ 1.22
PHGDH-208ENST00000641023 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.22
PHGDH-208ENST00000641023 E9PSI1 815 aa22.69■■□□□ 1.22
PHGDH-208ENST00000641023 RRP1P56182 461 aaKnown RBP22.69■■□□□ 1.22
PHGDH-208ENST00000641023 WWC1Q8IX03 1113 aa22.69■■□□□ 1.22
PHGDH-208ENST00000641023 NGDNQ8NEJ9 315 aaKnown RBP22.69■■□□□ 1.22
PHGDH-208ENST00000641023 PNNQ9H307 717 aaKnown RBP22.69■■□□□ 1.22
PHGDH-208ENST00000641023 ZRANB1Q9UGI0 708 aa22.69■■□□□ 1.22
PHGDH-208ENST00000641023 PMFBP1Q8TBY8 1022 aa22.68■■□□□ 1.22
PHGDH-208ENST00000641023 FBLN1P23142 703 aa22.67■■□□□ 1.22
PHGDH-208ENST00000641023 TRMT2AQ8IZ69 625 aaKnown RBP22.67■■□□□ 1.22
PHGDH-208ENST00000641023 NEUROD2Q15784 382 aa22.67■■□□□ 1.22
PHGDH-208ENST00000641023 IQSEC2Q5JU85 1478 aa22.66■■□□□ 1.22
PHGDH-208ENST00000641023 CCDC27Q2M243 656 aa22.66■■□□□ 1.22
PHGDH-208ENST00000641023 NRKQ7Z2Y5 1582 aa22.66■■□□□ 1.22
PHGDH-208ENST00000641023 MAP2P11137 1827 aaKnown RBP22.65■■□□□ 1.22
PHGDH-208ENST00000641023 TTC21AQ8NDW8 1320 aa22.65■■□□□ 1.22
PHGDH-208ENST00000641023 EMILIN1Q9Y6C2 1016 aa22.65■■□□□ 1.22
PHGDH-208ENST00000641023 RRP7AQ9Y3A4 280 aaKnown RBP22.64■■□□□ 1.22
PHGDH-208ENST00000641023 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
PHGDH-208ENST00000641023 PHF23Q9BUL5 403 aaPredicted RBP22.64■■□□□ 1.21
PHGDH-208ENST00000641023 MAPK8IP3Q9UPT6 1336 aa22.63■■□□□ 1.21
PHGDH-208ENST00000641023 PLEKHF1Q96S99 279 aa22.63■■□□□ 1.21
PHGDH-208ENST00000641023 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-208ENST00000641023 FCHSD2O94868 740 aa22.62■■□□□ 1.21
PHGDH-208ENST00000641023 WDR63Q8IWG1 891 aa22.62■■□□□ 1.21
PHGDH-208ENST00000641023 SPINK5Q9NQ38 1064 aaPredicted RBP22.62■■□□□ 1.21
PHGDH-208ENST00000641023 FMN2Q9NZ56 1722 aa22.62■■□□□ 1.21
PHGDH-208ENST00000641023 OVOS2A0A0J9YW53 1432 aa22.61■■□□□ 1.21
PHGDH-208ENST00000641023 OVOS2Q6IE36 1432 aa22.61■■□□□ 1.21
PHGDH-208ENST00000641023 RGPD8O14715 1765 aaPredicted RBP22.61■■□□□ 1.21
PHGDH-208ENST00000641023 RRS1Q15050 365 aaKnown RBP22.6■■□□□ 1.21
PHGDH-208ENST00000641023 ADGRL3Q9HAR2 1447 aa22.59■■□□□ 1.21
PHGDH-208ENST00000641023 NEFMP07197 916 aa22.59■■□□□ 1.21
PHGDH-208ENST00000641023 DMRT2Q9Y5R5 561 aa22.59■■□□□ 1.21
PHGDH-208ENST00000641023 NALCNQ8IZF0 1738 aa22.58■■□□□ 1.21
PHGDH-208ENST00000641023 RBM33Q96EV2 1170 aaKnown RBP22.58■■□□□ 1.2
PHGDH-208ENST00000641023 IL13P35225 146 aa22.57■■□□□ 1.2
PHGDH-208ENST00000641023 C14orf37Q86TY3 774 aa22.57■■□□□ 1.2
PHGDH-208ENST00000641023 USP31Q70CQ4 1352 aa22.57■■□□□ 1.2
PHGDH-208ENST00000641023 TMPOP42166 694 aaKnown RBP22.56■■□□□ 1.2
PHGDH-208ENST00000641023 PHF8Q9UPP1 1060 aa22.55■■□□□ 1.2
PHGDH-208ENST00000641023 B4GALNT3Q6L9W6 998 aa22.54■■□□□ 1.2
PHGDH-208ENST00000641023 RSPH6AQ9H0K4 717 aa22.54■■□□□ 1.2
PHGDH-208ENST00000641023 NWD1Q149M9 1564 aa22.54■■□□□ 1.2
PHGDH-208ENST00000641023 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.53■■□□□ 1.2
PHGDH-208ENST00000641023 PRKAR2BP31323 418 aa22.53■■□□□ 1.2
PHGDH-208ENST00000641023 MYH16Q9H6N6 1097 aa22.52■■□□□ 1.2
PHGDH-208ENST00000641023 PROSER2Q86WR7 435 aaPredicted RBP22.51■■□□□ 1.19
PHGDH-208ENST00000641023 PLIN1O60240 522 aa22.51■■□□□ 1.19
PHGDH-208ENST00000641023 RIPK4P57078 832 aa22.51■■□□□ 1.19
PHGDH-208ENST00000641023 HMOX1P09601 288 aa22.5■■□□□ 1.19
PHGDH-208ENST00000641023 NLRP6P59044 892 aa22.5■■□□□ 1.19
PHGDH-208ENST00000641023 ESCO1Q5FWF5 840 aa22.5■■□□□ 1.19
PHGDH-208ENST00000641023 LRRC7Q96NW7 1537 aa22.5■■□□□ 1.19
PHGDH-208ENST00000641023 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
PHGDH-208ENST00000641023 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
PHGDH-208ENST00000641023 SOX12O15370 315 aa22.48■■□□□ 1.19
PHGDH-208ENST00000641023 PAK3O75914 559 aaPredicted RBP22.48■■□□□ 1.19
PHGDH-208ENST00000641023 ABTB2Q8N961 1025 aa22.48■■□□□ 1.19
PHGDH-208ENST00000641023 EXOC6Q8TAG9 804 aa22.48■■□□□ 1.19
PHGDH-208ENST00000641023 PIK3C2AO00443 1686 aa22.46■■□□□ 1.19
PHGDH-208ENST00000641023 EIF4A2Q14240 407 aaKnown RBP22.46■■□□□ 1.19
PHGDH-208ENST00000641023 IL16Q14005 1332 aa22.46■■□□□ 1.19
PHGDH-208ENST00000641023 PSME1Q06323 249 aa22.45■■□□□ 1.18
PHGDH-208ENST00000641023 C19orf44Q9H6X5 657 aa22.45■■□□□ 1.18
PHGDH-208ENST00000641023 MAP3K19Q56UN5 1328 aa22.45■■□□□ 1.18
PHGDH-208ENST00000641023 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.18
PHGDH-208ENST00000641023 SBNO1A3KN83 1393 aa22.44■■□□□ 1.18
PHGDH-208ENST00000641023 FLT4P35916 1363 aa22.44■■□□□ 1.18
PHGDH-208ENST00000641023 NFE2L2Q16236 605 aa22.43■■□□□ 1.18
PHGDH-208ENST00000641023 PHACTR3Q96KR7 559 aa22.43■■□□□ 1.18
PHGDH-208ENST00000641023 HSPA2P54652 639 aa22.43■■□□□ 1.18
PHGDH-208ENST00000641023 KDM4FA0A1W2PPD8 638 aa22.42■■□□□ 1.18
PHGDH-208ENST00000641023 AMPHP49418 695 aa22.42■■□□□ 1.18
PHGDH-208ENST00000641023 BCAR3O75815 825 aa22.41■■□□□ 1.18
PHGDH-208ENST00000641023 NUTM2GQ5VZR2 741 aa22.41■■□□□ 1.18
PHGDH-208ENST00000641023 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms