RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 TRIM27P14373 513 aa17.28■□□□□ 0.36
PAX6-280ENST00000640872 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
PAX6-280ENST00000640872 ABCC3O15438 1527 aa17.28■□□□□ 0.36
PAX6-280ENST00000640872 CLCN1P35523 988 aa17.28■□□□□ 0.36
PAX6-280ENST00000640872 DDIT3P35638 169 aa17.28■□□□□ 0.36
PAX6-280ENST00000640872 U2AF1L5P0DN76 240 aaPredicted RBP17.27■□□□□ 0.36
PAX6-280ENST00000640872 U2AF1Q01081 240 aaKnown RBP eCLIP17.27■□□□□ 0.36
PAX6-280ENST00000640872 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
PAX6-280ENST00000640872 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
PAX6-280ENST00000640872 MRE11P49959 708 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 TMEM132EQ6IEE7 984 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 ANKRD36BQ8N2N9 1353 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
PAX6-280ENST00000640872 EXOSC9Q06265 439 aaKnown RBP17.25■□□□□ 0.35
PAX6-280ENST00000640872 DIP2BQ9P265 1576 aa17.25■□□□□ 0.35
PAX6-280ENST00000640872 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
PAX6-280ENST00000640872 PUS7Q96PZ0 661 aaKnown RBP17.25■□□□□ 0.35
PAX6-280ENST00000640872 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
PAX6-280ENST00000640872 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
PAX6-280ENST00000640872 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
PAX6-280ENST00000640872 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
PAX6-280ENST00000640872 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
PAX6-280ENST00000640872 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
PAX6-280ENST00000640872 SNX21Q969T3 373 aa17.23■□□□□ 0.35
PAX6-280ENST00000640872 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
PAX6-280ENST00000640872 RICTORQ6R327 1708 aa17.23■□□□□ 0.35
PAX6-280ENST00000640872 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
PAX6-280ENST00000640872 ARHGEF28Q8N1W1 1705 aaKnown RBP17.22■□□□□ 0.35
PAX6-280ENST00000640872 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
PAX6-280ENST00000640872 GRPEL1Q9HAV7 217 aa17.22■□□□□ 0.35
PAX6-280ENST00000640872 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
PAX6-280ENST00000640872 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
PAX6-280ENST00000640872 ZBTB40Q9NUA8 1239 aa17.22■□□□□ 0.35
PAX6-280ENST00000640872 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
PAX6-280ENST00000640872 IL16Q14005 1332 aa17.21■□□□□ 0.35
PAX6-280ENST00000640872 TMEM57Q8N5G2 664 aa17.21■□□□□ 0.34
PAX6-280ENST00000640872 NOB1Q9ULX3 412 aaKnown RBP17.21■□□□□ 0.34
PAX6-280ENST00000640872 IDI1Q13907 227 aa17.2■□□□□ 0.34
PAX6-280ENST00000640872 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
PAX6-280ENST00000640872 NUCB1Q02818 461 aa17.2■□□□□ 0.34
PAX6-280ENST00000640872 CAMSAP1Q5T5Y3 1602 aa17.19■□□□□ 0.34
PAX6-280ENST00000640872 CIZ1Q9ULV3 898 aaPredicted RBP17.18■□□□□ 0.34
PAX6-280ENST00000640872 TNPO1Q92973 898 aaKnown RBP17.18■□□□□ 0.34
PAX6-280ENST00000640872 NAP1L5Q96NT1 182 aaPredicted RBP17.18■□□□□ 0.34
PAX6-280ENST00000640872 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
PAX6-280ENST00000640872 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
PAX6-280ENST00000640872 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
PAX6-280ENST00000640872 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
PAX6-280ENST00000640872 RAB3GAP1Q15042 981 aa17.16■□□□□ 0.34
PAX6-280ENST00000640872 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
PAX6-280ENST00000640872 TSPOAP1O95153 1857 aa17.15■□□□□ 0.34
PAX6-280ENST00000640872 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
PAX6-280ENST00000640872 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
PAX6-280ENST00000640872 CHD1LQ86WJ1 897 aa17.15■□□□□ 0.34
PAX6-280ENST00000640872 KIF2CQ99661 725 aa17.15■□□□□ 0.34
PAX6-280ENST00000640872 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
PAX6-280ENST00000640872 MED14O60244 1454 aa17.15■□□□□ 0.34
PAX6-280ENST00000640872 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
PAX6-280ENST00000640872 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
PAX6-280ENST00000640872 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
PAX6-280ENST00000640872 ESPNB1AK53 854 aa17.14■□□□□ 0.33
PAX6-280ENST00000640872 GBP4Q96PP9 640 aa17.14■□□□□ 0.33
PAX6-280ENST00000640872 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
PAX6-280ENST00000640872 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
PAX6-280ENST00000640872 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
PAX6-280ENST00000640872 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
PAX6-280ENST00000640872 PIK3C2BO00750 1634 aa17.12■□□□□ 0.33
PAX6-280ENST00000640872 RIPK4P57078 832 aa17.11■□□□□ 0.33
PAX6-280ENST00000640872 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
PAX6-280ENST00000640872 SKOR2Q2VWA4 1001 aaPredicted RBP17.11■□□□□ 0.33
PAX6-280ENST00000640872 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
PAX6-280ENST00000640872 PTMSP20962 102 aa17.11■□□□□ 0.33
PAX6-280ENST00000640872 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
PAX6-280ENST00000640872 ARHGAP31Q2M1Z3 1444 aa17.1■□□□□ 0.33
PAX6-280ENST00000640872 PPIP5K1Q6PFW1 1433 aa17.1■□□□□ 0.33
PAX6-280ENST00000640872 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
PAX6-280ENST00000640872 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
PAX6-280ENST00000640872 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
PAX6-280ENST00000640872 STK26Q9P289 416 aa17.09■□□□□ 0.33
PAX6-280ENST00000640872 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.33
PAX6-280ENST00000640872 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.33
PAX6-280ENST00000640872 PNPLA6Q8IY17 1366 aa17.08■□□□□ 0.32
PAX6-280ENST00000640872 MLECQ14165 292 aa17.08■□□□□ 0.32
PAX6-280ENST00000640872 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
PAX6-280ENST00000640872 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
PAX6-280ENST00000640872 CD163L1Q9NR16 1453 aa17.07■□□□□ 0.32
PAX6-280ENST00000640872 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
PAX6-280ENST00000640872 REREQ9P2R6 1566 aa17.07■□□□□ 0.32
PAX6-280ENST00000640872 FYB1O15117 783 aa17.07■□□□□ 0.32
PAX6-280ENST00000640872 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
PAX6-280ENST00000640872 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
PAX6-280ENST00000640872 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
PAX6-280ENST00000640872 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
PAX6-280ENST00000640872 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
PAX6-280ENST00000640872 ZNF428Q96B54 188 aa17.06■□□□□ 0.32
PAX6-280ENST00000640872 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms