RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 RIMS2Q9UQ26 1411 aa11.56□□□□□ -0.56
RTTN-216ENST00000640376 RLBP1P12271 317 aa11.56□□□□□ -0.56
RTTN-216ENST00000640376 DEKP35659 375 aaKnown RBP11.56□□□□□ -0.56
RTTN-216ENST00000640376 TSR2Q969E8 191 aaKnown RBP11.56□□□□□ -0.56
RTTN-216ENST00000640376 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
RTTN-216ENST00000640376 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
RTTN-216ENST00000640376 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
RTTN-216ENST00000640376 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
RTTN-216ENST00000640376 NRXN3Q9Y4C0 1643 aa11.55□□□□□ -0.56
RTTN-216ENST00000640376 WAPLQ7Z5K2 1190 aa11.54□□□□□ -0.56
RTTN-216ENST00000640376 PLEKHF1Q96S99 279 aa11.54□□□□□ -0.56
RTTN-216ENST00000640376 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
RTTN-216ENST00000640376 MAP2P11137 1827 aaKnown RBP11.54□□□□□ -0.56
RTTN-216ENST00000640376 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
RTTN-216ENST00000640376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.53□□□□□ -0.56
RTTN-216ENST00000640376 ATP7BP35670 1465 aa11.53□□□□□ -0.56
RTTN-216ENST00000640376 DIAPH1O60610 1272 aaKnown RBP11.52□□□□□ -0.57
RTTN-216ENST00000640376 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
RTTN-216ENST00000640376 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
RTTN-216ENST00000640376 PPM1GO15355 546 aaPredicted RBP11.52□□□□□ -0.57
RTTN-216ENST00000640376 CDC42BPGQ6DT37 1551 aa11.51□□□□□ -0.57
RTTN-216ENST00000640376 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
RTTN-216ENST00000640376 EXOSC9Q06265 439 aaKnown RBP11.51□□□□□ -0.57
RTTN-216ENST00000640376 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
RTTN-216ENST00000640376 PCDHB15Q9Y5E8 787 aa11.51□□□□□ -0.57
RTTN-216ENST00000640376 FBLN1P23142 703 aa11.51□□□□□ -0.57
RTTN-216ENST00000640376 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
RTTN-216ENST00000640376 SMC4Q9NTJ3 1288 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 PNPLA6Q8IY17 1366 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 NEFMP07197 916 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 RIPK4P57078 832 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 ZKSCAN2Q63HK3 967 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
RTTN-216ENST00000640376 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
RTTN-216ENST00000640376 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
RTTN-216ENST00000640376 METP08581 1390 aa11.49□□□□□ -0.57
RTTN-216ENST00000640376 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
RTTN-216ENST00000640376 DAXXQ9UER7 740 aaPredicted RBP11.49□□□□□ -0.57
RTTN-216ENST00000640376 MON2Q7Z3U7 1717 aa11.48□□□□□ -0.57
RTTN-216ENST00000640376 CT47B1P0C2W7 299 aaPredicted RBP11.48□□□□□ -0.57
RTTN-216ENST00000640376 AAMPQ13685 434 aa11.48□□□□□ -0.57
RTTN-216ENST00000640376 DZIP1LQ8IYY4 767 aaKnown RBP11.48□□□□□ -0.57
RTTN-216ENST00000640376 FAM135BQ49AJ0 1406 aa11.48□□□□□ -0.57
RTTN-216ENST00000640376 ESF1Q9H501 851 aaKnown RBP11.47□□□□□ -0.57
RTTN-216ENST00000640376 AKAP12Q02952 1782 aa11.47□□□□□ -0.57
RTTN-216ENST00000640376 TRIM27P14373 513 aa11.47□□□□□ -0.57
RTTN-216ENST00000640376 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
RTTN-216ENST00000640376 TXNDC2Q86VQ3 553 aa11.47□□□□□ -0.57
RTTN-216ENST00000640376 SSH1Q8WYL5 1049 aa11.47□□□□□ -0.57
RTTN-216ENST00000640376 POLKQ9UBT6 870 aa11.47□□□□□ -0.57
RTTN-216ENST00000640376 EDC4Q6P2E9 1401 aaKnown RBP11.47□□□□□ -0.57
RTTN-216ENST00000640376 IL16Q14005 1332 aa11.46□□□□□ -0.57
RTTN-216ENST00000640376 PNNQ9H307 717 aaKnown RBP11.46□□□□□ -0.57
RTTN-216ENST00000640376 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
RTTN-216ENST00000640376 DLG5Q8TDM6 1919 aa11.46□□□□□ -0.57
RTTN-216ENST00000640376 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
RTTN-216ENST00000640376 UBR1Q8IWV7 1749 aa11.46□□□□□ -0.58
RTTN-216ENST00000640376 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.58
RTTN-216ENST00000640376 NME9Q86XW9 330 aa11.46□□□□□ -0.58
RTTN-216ENST00000640376 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.58
RTTN-216ENST00000640376 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.58
RTTN-216ENST00000640376 ZMYM3Q14202 1370 aa11.46□□□□□ -0.58
RTTN-216ENST00000640376 CPS1P31327 1500 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 HMOX1P09601 288 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 ITPRIPQ8IWB1 547 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
RTTN-216ENST00000640376 NCKAP5LQ9HCH0 1330 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 FCHSD2O94868 740 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 C3P01024 1663 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 SEC24BO95487 1268 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
RTTN-216ENST00000640376 CDK12Q9NYV4 1490 aaPredicted RBP11.45□□□□□ -0.58
RTTN-216ENST00000640376 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
RTTN-216ENST00000640376 USP19O94966 1318 aa11.44□□□□□ -0.58
RTTN-216ENST00000640376 ATF7IPQ6VMQ6 1270 aa11.44□□□□□ -0.58
RTTN-216ENST00000640376 NOB1Q9ULX3 412 aaKnown RBP11.44□□□□□ -0.58
RTTN-216ENST00000640376 TNRQ92752 1358 aa11.43□□□□□ -0.58
RTTN-216ENST00000640376 NUDT16Q96DE0 195 aaKnown RBP11.43□□□□□ -0.58
RTTN-216ENST00000640376 THUMPD2Q9BTF0 503 aaKnown RBP11.43□□□□□ -0.58
RTTN-216ENST00000640376 KIF16BQ96L93 1317 aa11.42□□□□□ -0.58
RTTN-216ENST00000640376 PHACTR3Q96KR7 559 aa11.42□□□□□ -0.58
RTTN-216ENST00000640376 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
RTTN-216ENST00000640376 TECPR2O15040 1411 aa11.42□□□□□ -0.58
RTTN-216ENST00000640376 DDX19BQ9UMR2 479 aa11.42□□□□□ -0.58
RTTN-216ENST00000640376 RRS1Q15050 365 aaKnown RBP11.42□□□□□ -0.58
RTTN-216ENST00000640376 TMEM57Q8N5G2 664 aa11.42□□□□□ -0.58
RTTN-216ENST00000640376 NFE2L2Q16236 605 aa11.41□□□□□ -0.58
RTTN-216ENST00000640376 COG3Q96JB2 828 aa11.41□□□□□ -0.58
RTTN-216ENST00000640376 NRKQ7Z2Y5 1582 aa11.4□□□□□ -0.58
RTTN-216ENST00000640376 IL13P35225 146 aa11.4□□□□□ -0.58
RTTN-216ENST00000640376 CCDC61Q9Y6R9 512 aa11.4□□□□□ -0.58
RTTN-216ENST00000640376 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
RTTN-216ENST00000640376 TOPAZ1Q8N9V7 1692 aa11.4□□□□□ -0.58
RTTN-216ENST00000640376 PRR36Q9H6K5 1346 aa11.4□□□□□ -0.58
RTTN-216ENST00000640376 NFKBIBQ15653 356 aa11.4□□□□□ -0.59
RTTN-216ENST00000640376 ROBO2Q9HCK4 1378 aa11.4□□□□□ -0.59
RTTN-216ENST00000640376 TMEM2Q9UHN6 1383 aa11.4□□□□□ -0.59
RTTN-216ENST00000640376 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms