RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 MYH16Q9H6N6 1097 aa17.28■□□□□ 0.36
SPIN3-235ENST00000640104 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
SPIN3-235ENST00000640104 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
SPIN3-235ENST00000640104 PPIP5K1Q6PFW1 1433 aa17.27■□□□□ 0.36
SPIN3-235ENST00000640104 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.36
SPIN3-235ENST00000640104 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.35
SPIN3-235ENST00000640104 FBLN1P23142 703 aa17.27■□□□□ 0.35
SPIN3-235ENST00000640104 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.35
SPIN3-235ENST00000640104 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
SPIN3-235ENST00000640104 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
SPIN3-235ENST00000640104 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
SPIN3-235ENST00000640104 UBR1Q8IWV7 1749 aa17.26■□□□□ 0.35
SPIN3-235ENST00000640104 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
SPIN3-235ENST00000640104 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
SPIN3-235ENST00000640104 COG6Q9Y2V7 657 aa17.26■□□□□ 0.35
SPIN3-235ENST00000640104 FAM135BQ49AJ0 1406 aa17.25■□□□□ 0.35
SPIN3-235ENST00000640104 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
SPIN3-235ENST00000640104 TECPR2O15040 1411 aa17.25■□□□□ 0.35
SPIN3-235ENST00000640104 CPSF1Q10570 1443 aaKnown RBP17.25■□□□□ 0.35
SPIN3-235ENST00000640104 NCKAP5LQ9HCH0 1330 aa17.24■□□□□ 0.35
SPIN3-235ENST00000640104 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
SPIN3-235ENST00000640104 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
SPIN3-235ENST00000640104 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
SPIN3-235ENST00000640104 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
SPIN3-235ENST00000640104 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
SPIN3-235ENST00000640104 CPS1P31327 1500 aa17.23■□□□□ 0.35
SPIN3-235ENST00000640104 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
SPIN3-235ENST00000640104 NME9Q86XW9 330 aa17.23■□□□□ 0.35
SPIN3-235ENST00000640104 SIRT1Q96EB6 747 aa17.22■□□□□ 0.35
SPIN3-235ENST00000640104 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
SPIN3-235ENST00000640104 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
SPIN3-235ENST00000640104 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
SPIN3-235ENST00000640104 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
SPIN3-235ENST00000640104 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.35
SPIN3-235ENST00000640104 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
SPIN3-235ENST00000640104 RIPK4P57078 832 aa17.21■□□□□ 0.35
SPIN3-235ENST00000640104 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
SPIN3-235ENST00000640104 CDC42BPGQ6DT37 1551 aa17.21■□□□□ 0.34
SPIN3-235ENST00000640104 PNNQ9H307 717 aaKnown RBP17.2■□□□□ 0.34
SPIN3-235ENST00000640104 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
SPIN3-235ENST00000640104 IGHDP01880 384 aa17.2■□□□□ 0.34
SPIN3-235ENST00000640104 RLBP1P12271 317 aa17.19■□□□□ 0.34
SPIN3-235ENST00000640104 LTKP29376 864 aa17.19■□□□□ 0.34
SPIN3-235ENST00000640104 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
SPIN3-235ENST00000640104 RGS3P49796 1198 aa17.19■□□□□ 0.34
SPIN3-235ENST00000640104 FCHSD2O94868 740 aa17.18■□□□□ 0.34
SPIN3-235ENST00000640104 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
SPIN3-235ENST00000640104 EXOSC9Q06265 439 aaKnown RBP17.18■□□□□ 0.34
SPIN3-235ENST00000640104 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
SPIN3-235ENST00000640104 PRR36Q9H6K5 1346 aa17.18■□□□□ 0.34
SPIN3-235ENST00000640104 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
SPIN3-235ENST00000640104 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
SPIN3-235ENST00000640104 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
SPIN3-235ENST00000640104 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
SPIN3-235ENST00000640104 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
SPIN3-235ENST00000640104 IL16Q14005 1332 aa17.16■□□□□ 0.34
SPIN3-235ENST00000640104 HMOX1P09601 288 aa17.16■□□□□ 0.34
SPIN3-235ENST00000640104 CT47B1P0C2W7 299 aaPredicted RBP17.16■□□□□ 0.34
SPIN3-235ENST00000640104 COG3Q96JB2 828 aa17.16■□□□□ 0.34
SPIN3-235ENST00000640104 NEFMP07197 916 aa17.15■□□□□ 0.34
SPIN3-235ENST00000640104 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
SPIN3-235ENST00000640104 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
SPIN3-235ENST00000640104 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
SPIN3-235ENST00000640104 AATKQ6ZMQ8 1374 aa17.14■□□□□ 0.33
SPIN3-235ENST00000640104 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
SPIN3-235ENST00000640104 RRS1Q15050 365 aaKnown RBP17.14■□□□□ 0.33
SPIN3-235ENST00000640104 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
SPIN3-235ENST00000640104 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
SPIN3-235ENST00000640104 AKAP12Q02952 1782 aa17.14■□□□□ 0.33
SPIN3-235ENST00000640104 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
SPIN3-235ENST00000640104 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
SPIN3-235ENST00000640104 IL13P35225 146 aa17.13■□□□□ 0.33
SPIN3-235ENST00000640104 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
SPIN3-235ENST00000640104 C3P01024 1663 aa17.13■□□□□ 0.33
SPIN3-235ENST00000640104 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
SPIN3-235ENST00000640104 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
SPIN3-235ENST00000640104 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
SPIN3-235ENST00000640104 FTSJ3Q8IY81 847 aaKnown RBP17.12■□□□□ 0.33
SPIN3-235ENST00000640104 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
SPIN3-235ENST00000640104 PCDHB15Q9Y5E8 787 aa17.12■□□□□ 0.33
SPIN3-235ENST00000640104 AAMPQ13685 434 aa17.11■□□□□ 0.33
SPIN3-235ENST00000640104 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
SPIN3-235ENST00000640104 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
SPIN3-235ENST00000640104 PTPRUQ92729 1446 aa17.11■□□□□ 0.33
SPIN3-235ENST00000640104 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
SPIN3-235ENST00000640104 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
SPIN3-235ENST00000640104 ACEP12821 1306 aa17.09■□□□□ 0.33
SPIN3-235ENST00000640104 LAS1LQ9Y4W2 734 aaKnown RBP17.09■□□□□ 0.33
SPIN3-235ENST00000640104 TRIM27P14373 513 aa17.09■□□□□ 0.33
SPIN3-235ENST00000640104 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.33
SPIN3-235ENST00000640104 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
SPIN3-235ENST00000640104 SLIT1O75093 1534 aa17.07■□□□□ 0.32
SPIN3-235ENST00000640104 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
SPIN3-235ENST00000640104 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
SPIN3-235ENST00000640104 ARHGAP23Q9P227 1491 aa17.07■□□□□ 0.32
SPIN3-235ENST00000640104 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
SPIN3-235ENST00000640104 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
SPIN3-235ENST00000640104 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
SPIN3-235ENST00000640104 ATF7IPQ6VMQ6 1270 aa17.06■□□□□ 0.32
SPIN3-235ENST00000640104 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms