RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
NECAP1-215ENST00000639071 TRAK2O60296 914 aa11.83□□□□□ -0.52
NECAP1-215ENST00000639071 CHMP5Q9NZZ3 219 aa11.83□□□□□ -0.52
NECAP1-215ENST00000639071 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
NECAP1-215ENST00000639071 HDAC1Q13547 482 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-215ENST00000639071 GLI2P10070 1586 aa11.83□□□□□ -0.52
NECAP1-215ENST00000639071 THUMPD2Q9BTF0 503 aaKnown RBP11.82□□□□□ -0.52
NECAP1-215ENST00000639071 ELL2O00472 640 aaPredicted RBP11.82□□□□□ -0.52
NECAP1-215ENST00000639071 FYB1O15117 783 aa11.81□□□□□ -0.52
NECAP1-215ENST00000639071 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
NECAP1-215ENST00000639071 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
NECAP1-215ENST00000639071 SMC5Q8IY18 1101 aa11.81□□□□□ -0.52
NECAP1-215ENST00000639071 ADGRB2O60241 1585 aa11.81□□□□□ -0.52
NECAP1-215ENST00000639071 ZMYM3Q14202 1370 aa11.8□□□□□ -0.52
NECAP1-215ENST00000639071 RAPGEF3O95398 923 aa11.8□□□□□ -0.52
NECAP1-215ENST00000639071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.52
NECAP1-215ENST00000639071 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
NECAP1-215ENST00000639071 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
NECAP1-215ENST00000639071 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
NECAP1-215ENST00000639071 RSPH6AQ9H0K4 717 aa11.8□□□□□ -0.52
NECAP1-215ENST00000639071 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
NECAP1-215ENST00000639071 HMOX1P09601 288 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
NECAP1-215ENST00000639071 CAMSAP1Q5T5Y3 1602 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 NSD2O96028 1365 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 LMTK2Q8IWU2 1503 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 FSD2A1L4K1 749 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
NECAP1-215ENST00000639071 CT47B1P0C2W7 299 aaPredicted RBP11.79□□□□□ -0.52
NECAP1-215ENST00000639071 NUCB1Q02818 461 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 IDI1Q13907 227 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 CHD1LQ86WJ1 897 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
NECAP1-215ENST00000639071 PRKAR2BP31323 418 aa11.78□□□□□ -0.52
NECAP1-215ENST00000639071 RPGRIP1LQ68CZ1 1315 aa11.78□□□□□ -0.52
NECAP1-215ENST00000639071 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
NECAP1-215ENST00000639071 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
NECAP1-215ENST00000639071 IPO8O15397 1037 aaKnown RBP11.77□□□□□ -0.52
NECAP1-215ENST00000639071 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.52
NECAP1-215ENST00000639071 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.52
NECAP1-215ENST00000639071 KIF16BQ96L93 1317 aa11.77□□□□□ -0.52
NECAP1-215ENST00000639071 FRMPD1Q5SYB0 1578 aa11.77□□□□□ -0.52
NECAP1-215ENST00000639071 TSPYL6Q8N831 410 aa11.77□□□□□ -0.53
NECAP1-215ENST00000639071 TNPO1Q92973 898 aaKnown RBP11.77□□□□□ -0.53
NECAP1-215ENST00000639071 CABP1Q9NZU7 370 aa11.77□□□□□ -0.53
NECAP1-215ENST00000639071 NAP1L5Q96NT1 182 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-215ENST00000639071 TERF2IPQ9NYB0 399 aa11.76□□□□□ -0.53
NECAP1-215ENST00000639071 SIGLEC1Q9BZZ2 1709 aa11.76□□□□□ -0.53
NECAP1-215ENST00000639071 COL3A1P02461 1466 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-215ENST00000639071 PHACTR3Q96KR7 559 aa11.76□□□□□ -0.53
NECAP1-215ENST00000639071 ABCC3O15438 1527 aa11.76□□□□□ -0.53
NECAP1-215ENST00000639071 OSCARQ8IYS5 282 aa11.75□□□□□ -0.53
NECAP1-215ENST00000639071 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
NECAP1-215ENST00000639071 RBM25P49756 843 aaKnown RBP11.74□□□□□ -0.53
NECAP1-215ENST00000639071 GRPEL1Q9HAV7 217 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 NEXMIFQ5QGS0 1516 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 POGZQ7Z3K3 1410 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 PPIP5K1Q6PFW1 1433 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 IL16Q14005 1332 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
NECAP1-215ENST00000639071 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-215ENST00000639071 KIF2CQ99661 725 aa11.74□□□□□ -0.53
NECAP1-215ENST00000639071 HECW2Q9P2P5 1572 aa11.73□□□□□ -0.53
NECAP1-215ENST00000639071 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
NECAP1-215ENST00000639071 MRE11P49959 708 aa11.73□□□□□ -0.53
NECAP1-215ENST00000639071 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
NECAP1-215ENST00000639071 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
NECAP1-215ENST00000639071 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
NECAP1-215ENST00000639071 DDIT3P35638 169 aa11.73□□□□□ -0.53
NECAP1-215ENST00000639071 CD163L1Q9NR16 1453 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 BMP2KLQ5H9B9 411 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 LRRC7Q96NW7 1537 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 VAMP4O75379 141 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 ALDH1L2Q3SY69 923 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 WAPLQ7Z5K2 1190 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
NECAP1-215ENST00000639071 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NECAP1-215ENST00000639071 APBB1O00213 710 aa11.71□□□□□ -0.53
NECAP1-215ENST00000639071 FCHSD2O94868 740 aa11.71□□□□□ -0.53
NECAP1-215ENST00000639071 SSFA2P28290 1259 aa11.71□□□□□ -0.53
NECAP1-215ENST00000639071 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
NECAP1-215ENST00000639071 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
NECAP1-215ENST00000639071 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
NECAP1-215ENST00000639071 ERBB4Q15303 1308 aa11.71□□□□□ -0.54
NECAP1-215ENST00000639071 FBXO31Q5XUX0 539 aaPredicted RBP11.71□□□□□ -0.54
NECAP1-215ENST00000639071 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.54
NECAP1-215ENST00000639071 SNX21Q969T3 373 aa11.71□□□□□ -0.54
NECAP1-215ENST00000639071 MBIPQ9NS73 344 aa11.71□□□□□ -0.54
NECAP1-215ENST00000639071 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
NECAP1-215ENST00000639071 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
NECAP1-215ENST00000639071 MYO5BQ9ULV0 1848 aa11.7□□□□□ -0.54
NECAP1-215ENST00000639071 RAB3GAP1Q15042 981 aa11.7□□□□□ -0.54
NECAP1-215ENST00000639071 PTPRMP28827 1452 aa11.69□□□□□ -0.54
NECAP1-215ENST00000639071 C16orf71Q8IYS4 520 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms