RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-214ENST00000638843 LMOD2Q6P5Q4 547 aa13.54□□□□□ -0.24
SCARB2-214ENST00000638843 AFF2P51816 1311 aa13.53□□□□□ -0.24
SCARB2-214ENST00000638843 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
SCARB2-214ENST00000638843 ZNF772Q68DY9 489 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-214ENST00000638843 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
SCARB2-214ENST00000638843 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
SCARB2-214ENST00000638843 TIMELESSQ9UNS1 1208 aa13.53□□□□□ -0.24
SCARB2-214ENST00000638843 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
SCARB2-214ENST00000638843 ACEP12821 1306 aa13.52□□□□□ -0.24
SCARB2-214ENST00000638843 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.24
SCARB2-214ENST00000638843 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
SCARB2-214ENST00000638843 SOCS7O14512 581 aa13.51□□□□□ -0.25
SCARB2-214ENST00000638843 CABP1Q9NZU7 370 aa13.51□□□□□ -0.25
SCARB2-214ENST00000638843 POLR3AO14802 1390 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-214ENST00000638843 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-214ENST00000638843 RGPD8O14715 1765 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-214ENST00000638843 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
SCARB2-214ENST00000638843 FNBP4Q8N3X1 1017 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-214ENST00000638843 PPIP5K1Q6PFW1 1433 aa13.49□□□□□ -0.25
SCARB2-214ENST00000638843 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
SCARB2-214ENST00000638843 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
SCARB2-214ENST00000638843 QTRT2Q9H974 415 aaKnown RBP13.48□□□□□ -0.25
SCARB2-214ENST00000638843 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-214ENST00000638843 TESK2Q96S53 571 aa13.47□□□□□ -0.25
SCARB2-214ENST00000638843 USP21Q9UK80 565 aa13.47□□□□□ -0.25
SCARB2-214ENST00000638843 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-214ENST00000638843 QRICH2Q9H0J4 1663 aa13.46□□□□□ -0.26
SCARB2-214ENST00000638843 RXRBP28702 533 aa13.45□□□□□ -0.26
SCARB2-214ENST00000638843 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
SCARB2-214ENST00000638843 FAM83GA6ND36 823 aa13.44□□□□□ -0.26
SCARB2-214ENST00000638843 BCL9LQ86UU0 1499 aa13.44□□□□□ -0.26
SCARB2-214ENST00000638843 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
SCARB2-214ENST00000638843 ATAD2Q6PL18 1390 aa13.43□□□□□ -0.26
SCARB2-214ENST00000638843 USP47Q96K76 1375 aa13.43□□□□□ -0.26
SCARB2-214ENST00000638843 TOPAZ1Q8N9V7 1692 aa13.43□□□□□ -0.26
SCARB2-214ENST00000638843 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
SCARB2-214ENST00000638843 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-214ENST00000638843 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-214ENST00000638843 USP6P35125 1406 aa13.41□□□□□ -0.26
SCARB2-214ENST00000638843 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
SCARB2-214ENST00000638843 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
SCARB2-214ENST00000638843 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
SCARB2-214ENST00000638843 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-214ENST00000638843 SLC12A5Q9H2X9 1139 aa13.41□□□□□ -0.26
SCARB2-214ENST00000638843 SLIT2O94813 1529 aa13.4□□□□□ -0.26
SCARB2-214ENST00000638843 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
SCARB2-214ENST00000638843 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
SCARB2-214ENST00000638843 ATRNO75882 1429 aa13.39□□□□□ -0.27
SCARB2-214ENST00000638843 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
SCARB2-214ENST00000638843 BRD4O60885 1362 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-214ENST00000638843 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
SCARB2-214ENST00000638843 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 NLRP6P59044 892 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 ZC3H6P61129 1189 aaKnown RBP13.38□□□□□ -0.27
SCARB2-214ENST00000638843 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
SCARB2-214ENST00000638843 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 KIAA0232Q92628 1395 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 USP19O94966 1318 aa13.38□□□□□ -0.27
SCARB2-214ENST00000638843 AKT1S1Q96B36 256 aa13.37□□□□□ -0.27
SCARB2-214ENST00000638843 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-214ENST00000638843 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
SCARB2-214ENST00000638843 GCP02774 474 aa13.37□□□□□ -0.27
SCARB2-214ENST00000638843 TMF1P82094 1093 aa13.37□□□□□ -0.27
SCARB2-214ENST00000638843 CHRNA2Q15822 529 aa13.37□□□□□ -0.27
SCARB2-214ENST00000638843 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
SCARB2-214ENST00000638843 VPS72Q15906 364 aa13.36□□□□□ -0.27
SCARB2-214ENST00000638843 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-214ENST00000638843 RGS12O14924 1447 aa13.35□□□□□ -0.27
SCARB2-214ENST00000638843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCARB2-214ENST00000638843 HDGFL2Q7Z4V5 671 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-214ENST00000638843 TERF2IPQ9NYB0 399 aa13.34□□□□□ -0.27
SCARB2-214ENST00000638843 ZRANB1Q9UGI0 708 aa13.34□□□□□ -0.27
SCARB2-214ENST00000638843 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
SCARB2-214ENST00000638843 CCDC9Q9Y3X0 531 aaKnown RBP13.33□□□□□ -0.28
SCARB2-214ENST00000638843 A0A1W2PP64 1363 aa13.33□□□□□ -0.28
SCARB2-214ENST00000638843 NME9Q86XW9 330 aa13.32□□□□□ -0.28
SCARB2-214ENST00000638843 CPDO75976 1380 aa13.32□□□□□ -0.28
SCARB2-214ENST00000638843 ABCA3Q99758 1704 aa13.32□□□□□ -0.28
SCARB2-214ENST00000638843 EIF4G2P78344 907 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCARB2-214ENST00000638843 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
SCARB2-214ENST00000638843 HSPA5P11021 654 aaKnown RBP13.31□□□□□ -0.28
SCARB2-214ENST00000638843 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
SCARB2-214ENST00000638843 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-214ENST00000638843 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
SCARB2-214ENST00000638843 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
SCARB2-214ENST00000638843 SOX12O15370 315 aa13.3□□□□□ -0.28
SCARB2-214ENST00000638843 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
SCARB2-214ENST00000638843 ZBTB7CA1YPR0 619 aa13.29□□□□□ -0.28
SCARB2-214ENST00000638843 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-214ENST00000638843 EDC4Q6P2E9 1401 aaKnown RBP13.29□□□□□ -0.28
SCARB2-214ENST00000638843 EP400Q96L91 3159 aa13.29□□□□□ -0.28
SCARB2-214ENST00000638843 SPATA31A5Q5VU36 1347 aa13.29□□□□□ -0.28
SCARB2-214ENST00000638843 SPATA31A7Q8IWB4 1347 aa13.29□□□□□ -0.28
SCARB2-214ENST00000638843 USP31Q70CQ4 1352 aa13.29□□□□□ -0.28
SCARB2-214ENST00000638843 FAM98CQ17RN3 349 aaKnown RBP13.28□□□□□ -0.28
SCARB2-214ENST00000638843 ARHGEF25Q86VW2 580 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms