RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
SNIP1-204ENST00000638725 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
SNIP1-204ENST00000638725 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
SNIP1-204ENST00000638725 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
SNIP1-204ENST00000638725 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
SNIP1-204ENST00000638725 A0A1W2PP64 1363 aa13.78□□□□□ -0.2
SNIP1-204ENST00000638725 PUS7Q96PZ0 661 aaKnown RBP13.77□□□□□ -0.2
SNIP1-204ENST00000638725 SENP3Q9H4L4 574 aaPredicted RBP13.77□□□□□ -0.2
SNIP1-204ENST00000638725 TRAK2O60296 914 aa13.77□□□□□ -0.21
SNIP1-204ENST00000638725 HSCBQ8IWL3 235 aa13.77□□□□□ -0.21
SNIP1-204ENST00000638725 ASXL2Q76L83 1435 aa13.76□□□□□ -0.21
SNIP1-204ENST00000638725 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
SNIP1-204ENST00000638725 ABCC11Q96J66 1382 aa13.76□□□□□ -0.21
SNIP1-204ENST00000638725 FRMPD1Q5SYB0 1578 aa13.76□□□□□ -0.21
SNIP1-204ENST00000638725 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
SNIP1-204ENST00000638725 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
SNIP1-204ENST00000638725 RIPK4P57078 832 aa13.75□□□□□ -0.21
SNIP1-204ENST00000638725 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
SNIP1-204ENST00000638725 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
SNIP1-204ENST00000638725 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
SNIP1-204ENST00000638725 HECW2Q9P2P5 1572 aa13.74□□□□□ -0.21
SNIP1-204ENST00000638725 STK26Q9P289 416 aa13.74□□□□□ -0.21
SNIP1-204ENST00000638725 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
SNIP1-204ENST00000638725 IL16Q14005 1332 aa13.73□□□□□ -0.21
SNIP1-204ENST00000638725 ABCC3O15438 1527 aa13.73□□□□□ -0.21
SNIP1-204ENST00000638725 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
SNIP1-204ENST00000638725 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
SNIP1-204ENST00000638725 NUCB1Q02818 461 aa13.72□□□□□ -0.21
SNIP1-204ENST00000638725 SIGLEC1Q9BZZ2 1709 aa13.72□□□□□ -0.21
SNIP1-204ENST00000638725 FYB1O15117 783 aa13.72□□□□□ -0.21
SNIP1-204ENST00000638725 NCOA3Q9Y6Q9 1424 aa13.72□□□□□ -0.21
SNIP1-204ENST00000638725 RBM25P49756 843 aaKnown RBP13.71□□□□□ -0.21
SNIP1-204ENST00000638725 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.21
SNIP1-204ENST00000638725 DDIT3P35638 169 aa13.71□□□□□ -0.21
SNIP1-204ENST00000638725 DDX11L8A8MPP1 907 aa13.71□□□□□ -0.22
SNIP1-204ENST00000638725 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.22
SNIP1-204ENST00000638725 POGZQ7Z3K3 1410 aa13.7□□□□□ -0.22
SNIP1-204ENST00000638725 DIAPH1O60610 1272 aaKnown RBP13.7□□□□□ -0.22
SNIP1-204ENST00000638725 MINK1Q8N4C8 1332 aaPredicted RBP13.7□□□□□ -0.22
SNIP1-204ENST00000638725 MRE11P49959 708 aa13.69□□□□□ -0.22
SNIP1-204ENST00000638725 SNX21Q969T3 373 aa13.69□□□□□ -0.22
SNIP1-204ENST00000638725 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
SNIP1-204ENST00000638725 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
SNIP1-204ENST00000638725 TNPO1Q92973 898 aaKnown RBP13.68□□□□□ -0.22
SNIP1-204ENST00000638725 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
SNIP1-204ENST00000638725 CD163L1Q9NR16 1453 aa13.68□□□□□ -0.22
SNIP1-204ENST00000638725 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
SNIP1-204ENST00000638725 GRPEL1Q9HAV7 217 aa13.68□□□□□ -0.22
SNIP1-204ENST00000638725 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
SNIP1-204ENST00000638725 UBE2Q2Q8WVN8 375 aa13.67□□□□□ -0.22
SNIP1-204ENST00000638725 C1orf115Q9H7X2 142 aa13.67□□□□□ -0.22
SNIP1-204ENST00000638725 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
SNIP1-204ENST00000638725 IDI1Q13907 227 aa13.67□□□□□ -0.22
SNIP1-204ENST00000638725 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
SNIP1-204ENST00000638725 ATAD2Q6PL18 1390 aa13.67□□□□□ -0.22
SNIP1-204ENST00000638725 CFAP74Q9C0B2 1584 aa13.67□□□□□ -0.22
SNIP1-204ENST00000638725 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 KIF2CQ99661 725 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 LRRC7Q96NW7 1537 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
SNIP1-204ENST00000638725 CLCN1P35523 988 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 MED14O60244 1454 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 FBLN1P23142 703 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
SNIP1-204ENST00000638725 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
SNIP1-204ENST00000638725 PTPRMP28827 1452 aa13.65□□□□□ -0.22
SNIP1-204ENST00000638725 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
SNIP1-204ENST00000638725 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
SNIP1-204ENST00000638725 ZBTB7BO15156 539 aaPredicted RBP13.65□□□□□ -0.22
SNIP1-204ENST00000638725 FCHSD2O94868 740 aa13.64□□□□□ -0.23
SNIP1-204ENST00000638725 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
SNIP1-204ENST00000638725 NAP1L5Q96NT1 182 aaPredicted RBP13.64□□□□□ -0.23
SNIP1-204ENST00000638725 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
SNIP1-204ENST00000638725 GAS2L3Q86XJ1 694 aa13.64□□□□□ -0.23
SNIP1-204ENST00000638725 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
SNIP1-204ENST00000638725 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
SNIP1-204ENST00000638725 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
SNIP1-204ENST00000638725 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
SNIP1-204ENST00000638725 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
SNIP1-204ENST00000638725 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
SNIP1-204ENST00000638725 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
SNIP1-204ENST00000638725 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
SNIP1-204ENST00000638725 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
SNIP1-204ENST00000638725 ELL2O00472 640 aaPredicted RBP13.62□□□□□ -0.23
SNIP1-204ENST00000638725 VAMP4O75379 141 aa13.62□□□□□ -0.23
SNIP1-204ENST00000638725 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
SNIP1-204ENST00000638725 ZFYVE9O95405 1425 aa13.62□□□□□ -0.23
SNIP1-204ENST00000638725 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
SNIP1-204ENST00000638725 HMOX1P09601 288 aa13.62□□□□□ -0.23
SNIP1-204ENST00000638725 SIRT2Q8IXJ6 389 aa13.62□□□□□ -0.23
SNIP1-204ENST00000638725 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
SNIP1-204ENST00000638725 CABP1Q9NZU7 370 aa13.62□□□□□ -0.23
SNIP1-204ENST00000638725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNIP1-204ENST00000638725 ISY1Q9ULR0 285 aaKnown RBP13.61□□□□□ -0.23
SNIP1-204ENST00000638725 MYO5BQ9ULV0 1848 aa13.61□□□□□ -0.23
SNIP1-204ENST00000638725 CDC42BPGQ6DT37 1551 aa13.61□□□□□ -0.23
SNIP1-204ENST00000638725 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms