RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	DDX19B	Q9UMR2	479 aa		13.75	□□□□□ -0.21
STRADA-231	ENST00000638708	CLTCL1	P53675	1640 aa		13.75	□□□□□ -0.21
STRADA-231	ENST00000638708	ERVK-7	P63135	1459 aa		13.75	□□□□□ -0.21
STRADA-231	ENST00000638708	CD2BP2	O95400	341 aa	Known RBP	13.75	□□□□□ -0.21
STRADA-231	ENST00000638708	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
STRADA-231	ENST00000638708	GAS2L2	Q8NHY3	880 aa		13.75	□□□□□ -0.21
STRADA-231	ENST00000638708	BMP2KL	Q5H9B9	411 aa		13.74	□□□□□ -0.21
STRADA-231	ENST00000638708	GTPBP4	Q9BZE4	634 aa	Known RBP	13.74	□□□□□ -0.21
STRADA-231	ENST00000638708	USP32	Q8NFA0	1604 aa		13.74	□□□□□ -0.21
STRADA-231	ENST00000638708	NUCB1	Q02818	461 aa		13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	RSPH4A	Q5TD94	716 aa		13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	CAVIN1	Q6NZI2	390 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	TCP11L2	Q8N4U5	519 aa		13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	FOXD4L1	Q9NU39	408 aa		13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	MYO3A	Q8NEV4	1616 aa		13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	MYRIP	Q8NFW9	859 aa		13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	UHRF1BP1L	A0JNW5	1464 aa		13.73	□□□□□ -0.21
STRADA-231	ENST00000638708	TNNT2	P45379	298 aa	Predicted RBP	13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	NUCB2	P80303	420 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	LMBRD1	Q9NUN5	540 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	TRPM2	O94759	1503 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	SYCP2	Q9BX26	1530 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	PPRC1	Q5VV67	1664 aa	Known RBP	13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	KIF20A	O95235	890 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	CYP2E1	P05181	493 aa	Predicted RBP	13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	OSCAR	Q8IYS5	282 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	STAC3	Q96MF2	364 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	ARID3A	Q99856	593 aa		13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	RRP7A	Q9Y3A4	280 aa	Known RBP	13.72	□□□□□ -0.21
STRADA-231	ENST00000638708	SLC24A1	O60721	1099 aa		13.71	□□□□□ -0.21
STRADA-231	ENST00000638708	PRIM1	P49642	420 aa	Known RBP	13.71	□□□□□ -0.22
STRADA-231	ENST00000638708	NEUROD2	Q15784	382 aa		13.71	□□□□□ -0.22
STRADA-231	ENST00000638708	MCTP1	Q6DN14	999 aa		13.71	□□□□□ -0.22
STRADA-231	ENST00000638708	ZNF518A	Q6AHZ1	1483 aa		13.7	□□□□□ -0.22
STRADA-231	ENST00000638708	TRIM27	P14373	513 aa		13.7	□□□□□ -0.22
STRADA-231	ENST00000638708	LETM1	O95202	739 aa	Predicted RBP	13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	KIAA2012	Q0VF49	1180 aa		13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	LRSAM1	Q6UWE0	723 aa		13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	ITPRIP	Q8IWB1	547 aa		13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	PRIMPOL	Q96LW4	560 aa		13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	CARD14	Q9BXL6	1004 aa		13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	CHD1L	Q86WJ1	897 aa		13.69	□□□□□ -0.22
STRADA-231	ENST00000638708	YEATS2	Q9ULM3	1422 aa		13.68	□□□□□ -0.22
STRADA-231	ENST00000638708	SMC4	Q9NTJ3	1288 aa		13.68	□□□□□ -0.22
STRADA-231	ENST00000638708	NOS1	P29475	1434 aa		13.68	□□□□□ -0.22
STRADA-231	ENST00000638708	ATF7IP	Q6VMQ6	1270 aa		13.68	□□□□□ -0.22
STRADA-231	ENST00000638708	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
STRADA-231	ENST00000638708	ZBTB40	Q9NUA8	1239 aa		13.68	□□□□□ -0.22
STRADA-231	ENST00000638708	NEURL4	Q96JN8	1562 aa		13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	INO80	Q9ULG1	1556 aa	Predicted RBP	13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	ABCC11	Q96J66	1382 aa		13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	HMGN5	P82970	282 aa	Known RBP	13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	PPP4R3B	Q5MIZ7	849 aa		13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	LNPK	Q9C0E8	428 aa		13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	MED14	O60244	1454 aa		13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	ABCA6	Q8N139	1617 aa		13.67	□□□□□ -0.22
STRADA-231	ENST00000638708	RABEP1	Q15276	862 aa		13.66	□□□□□ -0.22
STRADA-231	ENST00000638708	TBC1D9	Q6ZT07	1266 aa		13.66	□□□□□ -0.22
STRADA-231	ENST00000638708	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.66	□□□□□ -0.22
STRADA-231	ENST00000638708	ZNF710	Q8N1W2	664 aa		13.66	□□□□□ -0.22
STRADA-231	ENST00000638708	RBM42	Q9BTD8	480 aa	Known RBP	13.66	□□□□□ -0.22
STRADA-231	ENST00000638708	ZC3H13	Q5T200	1668 aa	Known RBP	13.65	□□□□□ -0.22
STRADA-231	ENST00000638708	GPT2	Q8TD30	523 aa		13.65	□□□□□ -0.22
STRADA-231	ENST00000638708	SBNO2	Q9Y2G9	1366 aa		13.65	□□□□□ -0.22
STRADA-231	ENST00000638708	NSD3	Q9BZ95	1437 aa		13.65	□□□□□ -0.22
STRADA-231	ENST00000638708	CWC22	Q9HCG8	908 aa	Known RBP	13.65	□□□□□ -0.22
STRADA-231	ENST00000638708	MAP3K4	Q9Y6R4	1608 aa		13.64	□□□□□ -0.23
STRADA-231	ENST00000638708	TMEM57	Q8N5G2	664 aa		13.64	□□□□□ -0.23
STRADA-231	ENST00000638708	RBM27	Q9P2N5	1060 aa	Known RBP	13.64	□□□□□ -0.23
STRADA-231	ENST00000638708	ARHGAP5	Q13017	1502 aa		13.64	□□□□□ -0.23
STRADA-231	ENST00000638708	PDE4C	Q08493	712 aa		13.64	□□□□□ -0.23
STRADA-231	ENST00000638708	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
STRADA-231	ENST00000638708	CDC45	O75419	566 aa		13.63	□□□□□ -0.23
STRADA-231	ENST00000638708	MORC1	Q86VD1	984 aa		13.63	□□□□□ -0.23
STRADA-231	ENST00000638708	SSH1	Q8WYL5	1049 aa		13.63	□□□□□ -0.23
STRADA-231	ENST00000638708	MYOM2	P54296	1465 aa		13.63	□□□□□ -0.23
STRADA-231	ENST00000638708	MBD3	O95983	291 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	PTMA	P06454	111 aa	Known RBP	13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	TAF3	Q5VWG9	929 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	GCC1	Q96CN9	775 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	CFAP53	Q96M91	514 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	CFAP44	Q96MT7	982 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	TMEM63C	Q9P1W3	806 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	SYCE3	A1L190	88 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	GTF2E1	P29083	439 aa	Predicted RBP	13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	EFCAB2	Q5VUJ9	269 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	PIBF1	Q8WXW3	757 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	PTPRT	O14522	1441 aa		13.62	□□□□□ -0.23
STRADA-231	ENST00000638708	IFT172	Q9UG01	1749 aa		13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	PRPF40A	O75400	957 aa	Known RBP	13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	EXOSC9	Q06265	439 aa	Known RBP	13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	BBX	Q8WY36	941 aa	Predicted RBP	13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	PLCH2	O75038	1416 aa		13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	CBX1	P83916	185 aa		13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	NOB1	Q9ULX3	412 aa	Known RBP	13.61	□□□□□ -0.23
STRADA-231	ENST00000638708	PPIP5K1	Q6PFW1	1433 aa		13.6	□□□□□ -0.23
STRADA-231	ENST00000638708	IPO8	O15397	1037 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms