RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 TULP1O00294 542 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-208ENST00000638473 CCDC184Q52MB2 194 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 DMRT2Q9Y5R5 561 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 KRT28Q7Z3Y7 464 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 PHF8Q9UPP1 1060 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 PPIP5K1Q6PFW1 1433 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 KIF6Q6ZMV9 814 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 KIF16BQ96L93 1317 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 TSR2Q969E8 191 aaKnown RBP5.43□□□□□ -1.54
SCN3A-208ENST00000638473 CDC42BPBQ9Y5S2 1711 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 EXOSC9Q06265 439 aaKnown RBP5.42□□□□□ -1.54
SCN3A-208ENST00000638473 ZRSR1Q15695 479 aaKnown RBP5.42□□□□□ -1.54
SCN3A-208ENST00000638473 USHBP1Q8N6Y0 703 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 PANK1Q8TE04 598 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 PRDM11Q9NQV5 511 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 MSH6P52701 1360 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 BTBD11A6QL63 1104 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 HSP90B1P14625 803 aaKnown RBP5.42□□□□□ -1.54
SCN3A-208ENST00000638473 NOB1Q9ULX3 412 aaKnown RBP5.42□□□□□ -1.54
SCN3A-208ENST00000638473 ACEP12821 1306 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 FOXO3O43524 673 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 ZNF530Q6P9A1 599 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-208ENST00000638473 NINLQ9Y2I6 1382 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 CLASP1Q7Z460 1538 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 KDM5DQ9BY66 1539 aa5.42□□□□□ -1.54
SCN3A-208ENST00000638473 TWISTNBQ3B726 338 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-208ENST00000638473 YEATS2Q9ULM3 1422 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 RIMBP3CA6NJZ7 1639 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 RIMBP3BA6NNM3 1639 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 RIMBP3Q9UFD9 1639 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 UHRF1BP1Q6BDS2 1440 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 GNAT3A8MTJ3 354 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 PNISRQ8TF01 805 aaKnown RBP5.41□□□□□ -1.54
SCN3A-208ENST00000638473 ASXL1Q8IXJ9 1541 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 GNL2Q13823 731 aaKnown RBP5.41□□□□□ -1.54
SCN3A-208ENST00000638473 ADAMTS2O95450 1211 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 FBXW7Q969H0 707 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 RBM19Q9Y4C8 960 aaKnown RBP5.41□□□□□ -1.54
SCN3A-208ENST00000638473 FCHSD2O94868 740 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 MYL6BP14649 208 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 WDR63Q8IWG1 891 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 ARHGEF12Q9NZN5 1544 aa5.41□□□□□ -1.54
SCN3A-208ENST00000638473 KDM5AP29375 1690 aaKnown RBP5.4□□□□□ -1.54
SCN3A-208ENST00000638473 FAM177BA6PVY3 158 aa5.4□□□□□ -1.54
SCN3A-208ENST00000638473 ZNF428Q96B54 188 aa5.4□□□□□ -1.54
SCN3A-208ENST00000638473 IFIT2P09913 472 aaKnown RBP5.4□□□□□ -1.54
SCN3A-208ENST00000638473 EMILIN1Q9Y6C2 1016 aa5.4□□□□□ -1.54
SCN3A-208ENST00000638473 G3BP1Q13283 466 aaKnown RBP eCLIP5.4□□□□□ -1.55
SCN3A-208ENST00000638473 NOL8Q76FK4 1167 aaKnown RBP5.4□□□□□ -1.55
SCN3A-208ENST00000638473 NPATQ14207 1427 aa5.4□□□□□ -1.55
SCN3A-208ENST00000638473 UBTFL1P0CB47 393 aaPredicted RBP5.4□□□□□ -1.55
SCN3A-208ENST00000638473 KLHL34Q8N239 644 aa5.4□□□□□ -1.55
SCN3A-208ENST00000638473 ANP32EQ9BTT0 268 aa5.4□□□□□ -1.55
SCN3A-208ENST00000638473 NFE2L2Q16236 605 aa5.4□□□□□ -1.55
SCN3A-208ENST00000638473 NSD2O96028 1365 aa5.4□□□□□ -1.55
SCN3A-208ENST00000638473 BCAR3O75815 825 aa5.4□□□□□ -1.55
SCN3A-208ENST00000638473 TMPOP42166 694 aaKnown RBP5.4□□□□□ -1.55
SCN3A-208ENST00000638473 HSPA2P54652 639 aa5.4□□□□□ -1.55
SCN3A-208ENST00000638473 SLC4A2P04920 1241 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 VPS37DQ86XT2 251 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 MIS18AQ9NYP9 233 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-208ENST00000638473 CEP152O94986 1710 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 YTHDC2Q9H6S0 1430 aaKnown RBP5.39□□□□□ -1.55
SCN3A-208ENST00000638473 MCM10Q7L590 875 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 FOXD4L1Q9NU39 408 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 MBD5Q9P267 1494 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 C1orf115Q9H7X2 142 aa5.39□□□□□ -1.55
SCN3A-208ENST00000638473 DCTN1Q14203 1278 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 ANKRD36BQ8N2N9 1353 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 TOMM22Q9NS69 142 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 SPHKAPQ2M3C7 1700 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 HDGFL1Q5TGJ6 251 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 WWC1Q8IX03 1113 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 GOLGA6L4A6NEF3 574 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 SF3B2Q13435 895 aaKnown RBP5.38□□□□□ -1.55
SCN3A-208ENST00000638473 CADPS2Q86UW7 1296 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 KAT6BQ8WYB5 2073 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 PLXNC1O60486 1568 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 FBLN1P23142 703 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 FAM161AQ3B820 660 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 TET3O43151 1660 aa5.38□□□□□ -1.55
SCN3A-208ENST00000638473 NOL10Q9BSC4 688 aaKnown RBP5.37□□□□□ -1.55
SCN3A-208ENST00000638473 DIAPH3Q9NSV4 1193 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 CDK11BP21127 795 aaKnown RBP5.37□□□□□ -1.55
SCN3A-208ENST00000638473 IQGAP3Q86VI3 1631 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 NEUROD6Q96NK8 337 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 ABCA9Q8IUA7 1624 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 ANKRD24Q8TF21 1146 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 THUMPD2Q9BTF0 503 aaKnown RBP5.37□□□□□ -1.55
SCN3A-208ENST00000638473 TMOD3Q9NYL9 352 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 TTC21AQ8NDW8 1320 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 TRPM2O94759 1503 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 HSP90AB4PQ58FF6 505 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 TTC21BQ7Z4L5 1316 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 TRIM44Q96DX7 344 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-208ENST00000638473 UGGT1Q9NYU2 1555 aa5.37□□□□□ -1.55
SCN3A-208ENST00000638473 CLTCQ00610 1675 aaKnown RBP5.36□□□□□ -1.55
SCN3A-208ENST00000638473 PLCB2Q00722 1185 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 AMOTQ4VCS5 1084 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms