RNA–Protein interactions for RNA: ENST00000638334.1

NECAP1-211, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-211ENST00000638334 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
NECAP1-211ENST00000638334 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
NECAP1-211ENST00000638334 FYB1O15117 783 aa13.17□□□□□ -0.3
NECAP1-211ENST00000638334 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
NECAP1-211ENST00000638334 NEFMP07197 916 aa13.17□□□□□ -0.3
NECAP1-211ENST00000638334 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
NECAP1-211ENST00000638334 PLEKHF1Q96S99 279 aa13.17□□□□□ -0.3
NECAP1-211ENST00000638334 DAXXQ9UER7 740 aaPredicted RBP13.17□□□□□ -0.3
NECAP1-211ENST00000638334 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
NECAP1-211ENST00000638334 DIAPH1O60610 1272 aaKnown RBP13.16□□□□□ -0.3
NECAP1-211ENST00000638334 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
NECAP1-211ENST00000638334 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
NECAP1-211ENST00000638334 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
NECAP1-211ENST00000638334 CPSF1Q10570 1443 aaKnown RBP13.15□□□□□ -0.3
NECAP1-211ENST00000638334 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
NECAP1-211ENST00000638334 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
NECAP1-211ENST00000638334 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
NECAP1-211ENST00000638334 CPS1P31327 1500 aa13.14□□□□□ -0.31
NECAP1-211ENST00000638334 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
NECAP1-211ENST00000638334 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
NECAP1-211ENST00000638334 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
NECAP1-211ENST00000638334 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
NECAP1-211ENST00000638334 LMOD3Q0VAK6 560 aa13.13□□□□□ -0.31
NECAP1-211ENST00000638334 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
NECAP1-211ENST00000638334 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-211ENST00000638334 HDAC1Q13547 482 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-211ENST00000638334 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-211ENST00000638334 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
NECAP1-211ENST00000638334 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
NECAP1-211ENST00000638334 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
NECAP1-211ENST00000638334 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
NECAP1-211ENST00000638334 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
NECAP1-211ENST00000638334 STK26Q9P289 416 aa13.11□□□□□ -0.31
NECAP1-211ENST00000638334 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
NECAP1-211ENST00000638334 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
NECAP1-211ENST00000638334 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
NECAP1-211ENST00000638334 BECN1Q14457 450 aa13.1□□□□□ -0.31
NECAP1-211ENST00000638334 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
NECAP1-211ENST00000638334 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
NECAP1-211ENST00000638334 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
NECAP1-211ENST00000638334 FBXO31Q5XUX0 539 aaPredicted RBP13.09□□□□□ -0.31
NECAP1-211ENST00000638334 MON2Q7Z3U7 1717 aa13.09□□□□□ -0.31
NECAP1-211ENST00000638334 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
NECAP1-211ENST00000638334 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
NECAP1-211ENST00000638334 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
NECAP1-211ENST00000638334 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
NECAP1-211ENST00000638334 IGHDP01880 384 aa13.08□□□□□ -0.32
NECAP1-211ENST00000638334 DEKP35659 375 aaKnown RBP13.08□□□□□ -0.32
NECAP1-211ENST00000638334 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
NECAP1-211ENST00000638334 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
NECAP1-211ENST00000638334 PANK1Q8TE04 598 aa13.08□□□□□ -0.32
NECAP1-211ENST00000638334 FRAT1Q92837 279 aaPredicted RBP13.08□□□□□ -0.32
NECAP1-211ENST00000638334 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
NECAP1-211ENST00000638334 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
NECAP1-211ENST00000638334 CCDC61Q9Y6R9 512 aa13.08□□□□□ -0.32
NECAP1-211ENST00000638334 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
NECAP1-211ENST00000638334 RIPK4P57078 832 aa13.07□□□□□ -0.32
NECAP1-211ENST00000638334 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
NECAP1-211ENST00000638334 TNRQ92752 1358 aa13.07□□□□□ -0.32
NECAP1-211ENST00000638334 GNAI1P63096 354 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 PIK3R4Q99570 1358 aa13.06□□□□□ -0.32
NECAP1-211ENST00000638334 RGS3P49796 1198 aa13.05□□□□□ -0.32
NECAP1-211ENST00000638334 POLKQ9UBT6 870 aa13.05□□□□□ -0.32
NECAP1-211ENST00000638334 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
NECAP1-211ENST00000638334 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
NECAP1-211ENST00000638334 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
NECAP1-211ENST00000638334 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
NECAP1-211ENST00000638334 C3P01024 1663 aa13.04□□□□□ -0.32
NECAP1-211ENST00000638334 ITSN1Q15811 1721 aa13.04□□□□□ -0.32
NECAP1-211ENST00000638334 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
NECAP1-211ENST00000638334 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
NECAP1-211ENST00000638334 RLBP1P12271 317 aa13.03□□□□□ -0.32
NECAP1-211ENST00000638334 NBR1Q14596 966 aa13.03□□□□□ -0.32
NECAP1-211ENST00000638334 COG3Q96JB2 828 aa13.03□□□□□ -0.32
NECAP1-211ENST00000638334 PCDHB15Q9Y5E8 787 aa13.03□□□□□ -0.32
NECAP1-211ENST00000638334 PTCH1Q13635 1447 aa13.03□□□□□ -0.32
NECAP1-211ENST00000638334 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.32
NECAP1-211ENST00000638334 TRIM27P14373 513 aa13.02□□□□□ -0.33
NECAP1-211ENST00000638334 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.33
NECAP1-211ENST00000638334 DIP2AQ14689 1571 aa13.02□□□□□ -0.33
NECAP1-211ENST00000638334 TSPOAP1O95153 1857 aa13.02□□□□□ -0.33
NECAP1-211ENST00000638334 PLEKHG3A1L390 1219 aa13.01□□□□□ -0.33
NECAP1-211ENST00000638334 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
NECAP1-211ENST00000638334 IL13P35225 146 aa13.01□□□□□ -0.33
NECAP1-211ENST00000638334 NUDT16Q96DE0 195 aaKnown RBP13.01□□□□□ -0.33
NECAP1-211ENST00000638334 ZBTB40Q9NUA8 1239 aa13.01□□□□□ -0.33
NECAP1-211ENST00000638334 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
NECAP1-211ENST00000638334 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
NECAP1-211ENST00000638334 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
NECAP1-211ENST00000638334 TOPAZ1Q8N9V7 1692 aa13□□□□□ -0.33
NECAP1-211ENST00000638334 METP08581 1390 aa13□□□□□ -0.33
NECAP1-211ENST00000638334 PRKAR2BP31323 418 aa13□□□□□ -0.33
NECAP1-211ENST00000638334 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms