RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 DHX8Q14562 1220 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-238ENST00000637276 SOGA1O94964 1423 aa19.57■□□□□ 0.72
CACNA1A-238ENST00000637276 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
CACNA1A-238ENST00000637276 MYL6BP14649 208 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 ZNF76P36508 570 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 APAF1O14727 1248 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 TICAM2Q86XR7 235 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-238ENST00000637276 RIPK4P57078 832 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 ERICH4A6NGS2 130 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 KIF6Q6ZMV9 814 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 FSD1Q9BTV5 496 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 GBP2P32456 591 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 NLRP13Q86W25 1043 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 ZNF526Q8TF50 670 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 EFCAB2Q5VUJ9 269 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 LRRFIP2Q9Y608 721 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 SKOR2Q2VWA4 1001 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 DDX58O95786 925 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 UBE4AQ14139 1066 aa19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 ATXN8OSP0DMR3 200 aa19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 ANAPC15P60006 121 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 TRERF1Q96PN7 1200 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 TRIM5Q9C035 493 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 MYO6Q9UM54 1294 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 RNF20Q5VTR2 975 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.71
CACNA1A-238ENST00000637276 GOPCQ9HD26 462 aa19.52■□□□□ 0.71
CACNA1A-238ENST00000637276 TMCO4Q5TGY1 634 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 ZFP91Q96JP5 570 aaPredicted RBP19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 XBP1P17861 261 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 ACBD3Q9H3P7 528 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 ARGLU1Q9NWB6 273 aaPredicted RBP19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 CCDC112Q8NEF3 446 aa19.5■□□□□ 0.71
CACNA1A-238ENST00000637276 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
CACNA1A-238ENST00000637276 TMCO5BA8MYB1 307 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 ZNF354CQ86Y25 554 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 UBA5Q9GZZ9 404 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 MACROD2A1Z1Q3 448 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 SERPINC1P01008 464 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 DRC1Q96MC2 740 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 CTNNBL1Q8WYA6 563 aaPredicted RBP19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 PANK1Q8TE04 598 aa19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 KIF15Q9NS87 1388 aa19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 MYBBP1AQ9BQG0 1328 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 MRPS9P82933 396 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-238ENST00000637276 CEP63Q96MT8 703 aa19.47■□□□□ 0.71
CACNA1A-238ENST00000637276 XPCQ01831 940 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 ZMYND15Q9H091 742 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 KAT6BQ8WYB5 2073 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 ANKRD18AQ8IVF6 992 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 FAM43AQ8N2R8 423 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 ERLIN2O94905 339 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 REC8O95072 547 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 ARL1P40616 181 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 VTI1AQ96AJ9 217 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 TBC1D2BQ9UPU7 963 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 FIBPO43427 364 aa19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 ESCO1Q5FWF5 840 aa19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 SMARCE1Q969G3 411 aa19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 LEKR1Q6ZMV7 388 aa19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 DDX23Q9BUQ8 820 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 FILIP1LQ4L180 1135 aa19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 APBB1IPQ7Z5R6 666 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 MMRN2Q9H8L6 949 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 TXLNAP40222 546 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 DYDC1Q8WWB3 177 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 CCDC69A6NI79 296 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 CHMP5Q9NZZ3 219 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 EZRP15311 586 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 SART3Q15020 963 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 DIAPH1O60610 1272 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 SLC3A2P08195 630 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 STAC3Q96MF2 364 aa19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 NAT10Q9H0A0 1025 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.7
CACNA1A-238ENST00000637276 NASPP49321 788 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 UBTFL1P0CB47 393 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 KIAA0754O94854 1291 aa19.38■□□□□ 0.69
CACNA1A-238ENST00000637276 SPTY2D1Q68D10 685 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-238ENST00000637276 ERC1Q8IUD2 1116 aa19.38■□□□□ 0.69
CACNA1A-238ENST00000637276 PRPF40AO75400 957 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 DDX19BQ9UMR2 479 aa19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 HOMER2Q9NSB8 354 aa19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 SOGA3Q5TF21 947 aa19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 EVC2Q86UK5 1308 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms