RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 DHX8Q14562 1220 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-238ENST00000637276 SOGA1O94964 1423 aa19.57■□□□□ 0.72
CACNA1A-238ENST00000637276 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
CACNA1A-238ENST00000637276 MYL6BP14649 208 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 ZNF76P36508 570 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 APAF1O14727 1248 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 TICAM2Q86XR7 235 aa19.56■□□□□ 0.72
CACNA1A-238ENST00000637276 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-238ENST00000637276 RIPK4P57078 832 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 ERICH4A6NGS2 130 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 KIF6Q6ZMV9 814 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 FSD1Q9BTV5 496 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 GBP2P32456 591 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 NLRP13Q86W25 1043 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 ZNF526Q8TF50 670 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 EFCAB2Q5VUJ9 269 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 LRRFIP2Q9Y608 721 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-238ENST00000637276 SKOR2Q2VWA4 1001 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 DDX58O95786 925 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 UBE4AQ14139 1066 aa19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 ATXN8OSP0DMR3 200 aa19.53■□□□□ 0.72
CACNA1A-238ENST00000637276 ANAPC15P60006 121 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 TRERF1Q96PN7 1200 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 TRIM5Q9C035 493 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 MYO6Q9UM54 1294 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 RNF20Q5VTR2 975 aa19.52■□□□□ 0.72
CACNA1A-238ENST00000637276 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.71
CACNA1A-238ENST00000637276 GOPCQ9HD26 462 aa19.52■□□□□ 0.71
CACNA1A-238ENST00000637276 TMCO4Q5TGY1 634 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 ZFP91Q96JP5 570 aaPredicted RBP19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 XBP1P17861 261 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 ACBD3Q9H3P7 528 aa19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 ARGLU1Q9NWB6 273 aaPredicted RBP19.51■□□□□ 0.71
CACNA1A-238ENST00000637276 CCDC112Q8NEF3 446 aa19.5■□□□□ 0.71
CACNA1A-238ENST00000637276 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
CACNA1A-238ENST00000637276 TMCO5BA8MYB1 307 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 ZNF354CQ86Y25 554 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 UBA5Q9GZZ9 404 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 MACROD2A1Z1Q3 448 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 SERPINC1P01008 464 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 DRC1Q96MC2 740 aa19.49■□□□□ 0.71
CACNA1A-238ENST00000637276 CTNNBL1Q8WYA6 563 aaPredicted RBP19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 PANK1Q8TE04 598 aa19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 KIF15Q9NS87 1388 aa19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 MYBBP1AQ9BQG0 1328 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-238ENST00000637276 MRPS9P82933 396 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-238ENST00000637276 CEP63Q96MT8 703 aa19.47■□□□□ 0.71
CACNA1A-238ENST00000637276 XPCQ01831 940 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 ZMYND15Q9H091 742 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 KAT6BQ8WYB5 2073 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 ANKRD18AQ8IVF6 992 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 FAM43AQ8N2R8 423 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 ERLIN2O94905 339 aa19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-238ENST00000637276 REC8O95072 547 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 ARL1P40616 181 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 VTI1AQ96AJ9 217 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 TBC1D2BQ9UPU7 963 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
CACNA1A-238ENST00000637276 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 FIBPO43427 364 aa19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 ESCO1Q5FWF5 840 aa19.44■□□□□ 0.7
CACNA1A-238ENST00000637276 SMARCE1Q969G3 411 aa19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 LEKR1Q6ZMV7 388 aa19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 DDX23Q9BUQ8 820 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 FILIP1LQ4L180 1135 aa19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 APBB1IPQ7Z5R6 666 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-238ENST00000637276 MMRN2Q9H8L6 949 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 TXLNAP40222 546 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 DYDC1Q8WWB3 177 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 CCDC69A6NI79 296 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 CHMP5Q9NZZ3 219 aa19.42■□□□□ 0.7
CACNA1A-238ENST00000637276 EZRP15311 586 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 SART3Q15020 963 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 DIAPH1O60610 1272 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-238ENST00000637276 SLC3A2P08195 630 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 STAC3Q96MF2 364 aa19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 NAT10Q9H0A0 1025 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-238ENST00000637276 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.7
CACNA1A-238ENST00000637276 NASPP49321 788 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 UBTFL1P0CB47 393 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-238ENST00000637276 KIAA0754O94854 1291 aa19.38■□□□□ 0.69
CACNA1A-238ENST00000637276 SPTY2D1Q68D10 685 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-238ENST00000637276 ERC1Q8IUD2 1116 aa19.38■□□□□ 0.69
CACNA1A-238ENST00000637276 PRPF40AO75400 957 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 DDX19BQ9UMR2 479 aa19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 HOMER2Q9NSB8 354 aa19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 SOGA3Q5TF21 947 aa19.37■□□□□ 0.69
CACNA1A-238ENST00000637276 EVC2Q86UK5 1308 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms