RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.25
CACNA1A-219ENST00000635917 RGPD8O14715 1765 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-219ENST00000635917 NKTRP30414 1462 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-219ENST00000635917 IQSEC2Q5JU85 1478 aa16.63■□□□□ 0.25
CACNA1A-219ENST00000635917 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
CACNA1A-219ENST00000635917 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
CACNA1A-219ENST00000635917 APAF1O14727 1248 aa16.61■□□□□ 0.25
CACNA1A-219ENST00000635917 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-219ENST00000635917 ANKLE2Q86XL3 938 aa16.61■□□□□ 0.25
CACNA1A-219ENST00000635917 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
CACNA1A-219ENST00000635917 KCNA6P17658 529 aa16.59■□□□□ 0.25
CACNA1A-219ENST00000635917 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-219ENST00000635917 CFAP53Q96M91 514 aa16.59■□□□□ 0.25
CACNA1A-219ENST00000635917 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-219ENST00000635917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNA1A-219ENST00000635917 SSH2Q76I76 1423 aa16.58■□□□□ 0.25
CACNA1A-219ENST00000635917 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
CACNA1A-219ENST00000635917 DUSP27Q5VZP5 1158 aa16.58■□□□□ 0.24
CACNA1A-219ENST00000635917 NALCNQ8IZF0 1738 aa16.57■□□□□ 0.24
CACNA1A-219ENST00000635917 AATKQ6ZMQ8 1374 aa16.56■□□□□ 0.24
CACNA1A-219ENST00000635917 USP6P35125 1406 aa16.56■□□□□ 0.24
CACNA1A-219ENST00000635917 NME9Q86XW9 330 aa16.56■□□□□ 0.24
CACNA1A-219ENST00000635917 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
CACNA1A-219ENST00000635917 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
CACNA1A-219ENST00000635917 RCAN3Q9UKA8 241 aa16.56■□□□□ 0.24
CACNA1A-219ENST00000635917 ACEP12821 1306 aa16.55■□□□□ 0.24
CACNA1A-219ENST00000635917 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
CACNA1A-219ENST00000635917 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
CACNA1A-219ENST00000635917 ANKARQ7Z5J8 1434 aa16.54■□□□□ 0.24
CACNA1A-219ENST00000635917 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-219ENST00000635917 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
CACNA1A-219ENST00000635917 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
CACNA1A-219ENST00000635917 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-219ENST00000635917 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
CACNA1A-219ENST00000635917 FBLN1P23142 703 aa16.53■□□□□ 0.24
CACNA1A-219ENST00000635917 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
CACNA1A-219ENST00000635917 TTC21BQ7Z4L5 1316 aa16.52■□□□□ 0.24
CACNA1A-219ENST00000635917 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
CACNA1A-219ENST00000635917 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
CACNA1A-219ENST00000635917 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
CACNA1A-219ENST00000635917 RRP1P56182 461 aaKnown RBP16.52■□□□□ 0.23
CACNA1A-219ENST00000635917 WWC1Q8IX03 1113 aa16.52■□□□□ 0.23
CACNA1A-219ENST00000635917 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.23
CACNA1A-219ENST00000635917 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.23
CACNA1A-219ENST00000635917 NUTM2FA1L443 756 aa16.51■□□□□ 0.23
CACNA1A-219ENST00000635917 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-219ENST00000635917 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
CACNA1A-219ENST00000635917 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
CACNA1A-219ENST00000635917 DIAPH1O60610 1272 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-219ENST00000635917 COG3Q96JB2 828 aa16.49■□□□□ 0.23
CACNA1A-219ENST00000635917 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
CACNA1A-219ENST00000635917 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-219ENST00000635917 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
CACNA1A-219ENST00000635917 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
CACNA1A-219ENST00000635917 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
CACNA1A-219ENST00000635917 E9PSI1 815 aa16.47■□□□□ 0.23
CACNA1A-219ENST00000635917 ADGRL3Q9HAR2 1447 aa16.47■□□□□ 0.23
CACNA1A-219ENST00000635917 LRRC7Q96NW7 1537 aa16.46■□□□□ 0.23
CACNA1A-219ENST00000635917 TTC21AQ8NDW8 1320 aa16.46■□□□□ 0.23
CACNA1A-219ENST00000635917 PEAK1Q9H792 1746 aa16.46■□□□□ 0.23
CACNA1A-219ENST00000635917 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
CACNA1A-219ENST00000635917 IL13P35225 146 aa16.45■□□□□ 0.22
CACNA1A-219ENST00000635917 WDR63Q8IWG1 891 aa16.45■□□□□ 0.22
CACNA1A-219ENST00000635917 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-219ENST00000635917 U2SURPO15042 1029 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-219ENST00000635917 FCHSD2O94868 740 aa16.43■□□□□ 0.22
CACNA1A-219ENST00000635917 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
CACNA1A-219ENST00000635917 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-219ENST00000635917 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-219ENST00000635917 RGPD1P0DJD0 1748 aa16.42■□□□□ 0.22
CACNA1A-219ENST00000635917 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
CACNA1A-219ENST00000635917 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
CACNA1A-219ENST00000635917 STRCP1A6NGW2 1772 aa16.4■□□□□ 0.22
CACNA1A-219ENST00000635917 PELP1Q8IZL8 1130 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-219ENST00000635917 NGDNQ8NEJ9 315 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-219ENST00000635917 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-219ENST00000635917 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
CACNA1A-219ENST00000635917 RBM33Q96EV2 1170 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-219ENST00000635917 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
CACNA1A-219ENST00000635917 PLIN1O60240 522 aa16.38■□□□□ 0.21
CACNA1A-219ENST00000635917 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-219ENST00000635917 EXOC6Q8TAG9 804 aa16.37■□□□□ 0.21
CACNA1A-219ENST00000635917 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
CACNA1A-219ENST00000635917 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
CACNA1A-219ENST00000635917 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
CACNA1A-219ENST00000635917 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-219ENST00000635917 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-219ENST00000635917 PHACTR3Q96KR7 559 aa16.35■□□□□ 0.21
CACNA1A-219ENST00000635917 IL16Q14005 1332 aa16.34■□□□□ 0.21
CACNA1A-219ENST00000635917 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
CACNA1A-219ENST00000635917 C20orf194Q5TEA3 1177 aa16.34■□□□□ 0.21
CACNA1A-219ENST00000635917 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
CACNA1A-219ENST00000635917 HMOX1P09601 288 aa16.33■□□□□ 0.21
CACNA1A-219ENST00000635917 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.21
CACNA1A-219ENST00000635917 RIPK4P57078 832 aa16.33■□□□□ 0.2
CACNA1A-219ENST00000635917 HSP90AB2PQ58FF8 381 aa16.33■□□□□ 0.2
CACNA1A-219ENST00000635917 SBNO1A3KN83 1393 aa16.33■□□□□ 0.2
CACNA1A-219ENST00000635917 STRCQ7RTU9 1775 aa16.32■□□□□ 0.2
CACNA1A-219ENST00000635917 BCAR3O75815 825 aa16.32■□□□□ 0.2
CACNA1A-219ENST00000635917 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms