RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 AATKQ6ZMQ8 1374 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 IQGAP1P46940 1657 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 TMPOP42166 694 aaKnown RBP5.74□□□□□ -1.49
SCN1A-210ENST00000635776 RGS3P49796 1198 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 ITPRIPQ8IWB1 547 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 IFT57Q9NWB7 429 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 FBXO31Q5XUX0 539 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-210ENST00000635776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCN1A-210ENST00000635776 PPRC1Q5VV67 1664 aaKnown RBP5.74□□□□□ -1.49
SCN1A-210ENST00000635776 SOS1Q07889 1333 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-210ENST00000635776 STK31Q9BXU1 1019 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 FYB1O15117 783 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 RARSP54136 660 aaKnown RBP5.73□□□□□ -1.49
SCN1A-210ENST00000635776 MVPQ14764 893 aaKnown RBP5.73□□□□□ -1.49
SCN1A-210ENST00000635776 GCC1Q96CN9 775 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 A0A1W2PP64 1363 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 PLEKHH1Q9ULM0 1364 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 TMEM2Q9UHN6 1383 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 AMPHP49418 695 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 MROH1Q8NDA8 1641 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 ATF7IPQ6VMQ6 1270 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 ABCA6Q8N139 1617 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 PLIN1O60240 522 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 PIK3R4Q99570 1358 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 COG6Q9Y2V7 657 aa5.73□□□□□ -1.49
SCN1A-210ENST00000635776 TRHP20396 242 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-210ENST00000635776 PRKAR2BP31323 418 aa5.72□□□□□ -1.49
SCN1A-210ENST00000635776 LAS1LQ9Y4W2 734 aaKnown RBP5.72□□□□□ -1.49
SCN1A-210ENST00000635776 C14orf37Q86TY3 774 aa5.72□□□□□ -1.49
SCN1A-210ENST00000635776 RRP7AQ9Y3A4 280 aaKnown RBP5.72□□□□□ -1.49
SCN1A-210ENST00000635776 CAMSAP1Q5T5Y3 1602 aa5.72□□□□□ -1.49
SCN1A-210ENST00000635776 PLEKHG1Q9ULL1 1385 aa5.72□□□□□ -1.49
SCN1A-210ENST00000635776 ANKLE2Q86XL3 938 aa5.72□□□□□ -1.49
SCN1A-210ENST00000635776 ADGRB1O14514 1584 aa5.72□□□□□ -1.49
SCN1A-210ENST00000635776 PLEKHG3A1L390 1219 aa5.72□□□□□ -1.49
SCN1A-210ENST00000635776 FRMPD1Q5SYB0 1578 aa5.71□□□□□ -1.49
SCN1A-210ENST00000635776 MYO3AQ8NEV4 1616 aa5.71□□□□□ -1.49
SCN1A-210ENST00000635776 KIF24Q5T7B8 1368 aa5.71□□□□□ -1.49
SCN1A-210ENST00000635776 HTATSF1O43719 755 aaKnown RBP5.71□□□□□ -1.5
SCN1A-210ENST00000635776 EXOSC9Q06265 439 aaKnown RBP5.71□□□□□ -1.5
SCN1A-210ENST00000635776 NEXMIFQ5QGS0 1516 aa5.71□□□□□ -1.5
SCN1A-210ENST00000635776 SENP3-EIF4A1A0A087X0R7 540 aa5.71□□□□□ -1.5
SCN1A-210ENST00000635776 PPIP5K1Q6PFW1 1433 aa5.71□□□□□ -1.5
SCN1A-210ENST00000635776 A2ML1A8K2U0 1454 aa5.71□□□□□ -1.5
SCN1A-210ENST00000635776 GOLGA6L22H0YM25 854 aa5.71□□□□□ -1.5
SCN1A-210ENST00000635776 HSP90AA1P07900 732 aaKnown RBP5.71□□□□□ -1.5
SCN1A-210ENST00000635776 BABAM1Q9NWV8 329 aa5.71□□□□□ -1.5
SCN1A-210ENST00000635776 KCNH5Q8NCM2 988 aa5.71□□□□□ -1.5
SCN1A-210ENST00000635776 PHF23Q9BUL5 403 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-210ENST00000635776 HDAC1Q13547 482 aaPredicted RBP5.7□□□□□ -1.5
SCN1A-210ENST00000635776 HSCBQ8IWL3 235 aa5.7□□□□□ -1.5
SCN1A-210ENST00000635776 RPAP2Q8IXW5 612 aaPredicted RBP5.7□□□□□ -1.5
SCN1A-210ENST00000635776 BRPF1P55201 1214 aaPredicted RBP5.7□□□□□ -1.5
SCN1A-210ENST00000635776 BCAR3O75815 825 aa5.7□□□□□ -1.5
SCN1A-210ENST00000635776 USP32Q8NFA0 1604 aa5.7□□□□□ -1.5
SCN1A-210ENST00000635776 TWISTNBQ3B726 338 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-210ENST00000635776 SPATA31D1Q6ZQQ2 1576 aa5.69□□□□□ -1.5
SCN1A-210ENST00000635776 TECPR2O15040 1411 aa5.69□□□□□ -1.5
SCN1A-210ENST00000635776 MCCP23508 829 aa5.69□□□□□ -1.5
SCN1A-210ENST00000635776 POLKQ9UBT6 870 aa5.69□□□□□ -1.5
SCN1A-210ENST00000635776 WAPLQ7Z5K2 1190 aa5.69□□□□□ -1.5
SCN1A-210ENST00000635776 ARHGEF40Q8TER5 1519 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 PNPLA6Q8IY17 1366 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 KDM2BQ8NHM5 1336 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 DIP2BQ9P265 1576 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 MSH5O43196 834 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 GNAI3P08754 354 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 AMOTL2Q9Y2J4 779 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 PTPRCP08575 1304 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 CCT4P50991 539 aaKnown RBP5.68□□□□□ -1.5
SCN1A-210ENST00000635776 HSP90AB4PQ58FF6 505 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 PANK1Q8TE04 598 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 NLRP6P59044 892 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 FLT4P35916 1363 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 PSME1Q06323 249 aa5.68□□□□□ -1.5
SCN1A-210ENST00000635776 CCDC30Q5VVM6 783 aa5.67□□□□□ -1.5
SCN1A-210ENST00000635776 ALKQ9UM73 1620 aa5.67□□□□□ -1.5
SCN1A-210ENST00000635776 ANKARQ7Z5J8 1434 aa5.67□□□□□ -1.5
SCN1A-210ENST00000635776 ANP32BQ92688 251 aaKnown RBP5.67□□□□□ -1.5
SCN1A-210ENST00000635776 CDK12Q9NYV4 1490 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-210ENST00000635776 ACEP12821 1306 aa5.67□□□□□ -1.5
SCN1A-210ENST00000635776 PTPRMP28827 1452 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 RTL1A6NKG5 1358 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 PIK3C2BO00750 1634 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 NME9Q86XW9 330 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 KIAA0232Q92628 1395 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 PLEKHO1Q53GL0 409 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-210ENST00000635776 SSH1Q8WYL5 1049 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 BCL2L13Q9BXK5 485 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 NOB1Q9ULX3 412 aaKnown RBP5.66□□□□□ -1.5
SCN1A-210ENST00000635776 PDZRN3Q9UPQ7 1066 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 TULP4Q9NRJ4 1543 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 SULT6B1Q6IMI4 303 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 PAK3O75914 559 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-210ENST00000635776 REC8O95072 547 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 SBNO1A3KN83 1393 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 L1TD1Q5T7N2 865 aaKnown RBP5.66□□□□□ -1.5
SCN1A-210ENST00000635776 RSPH6AQ9H0K4 717 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 HMOX1P09601 288 aa5.66□□□□□ -1.5
SCN1A-210ENST00000635776 IL13P35225 146 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms