RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
PTPN11-205ENST00000635625 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPN11-205ENST00000635625 NLRP1Q9C000 1473 aa16.11■□□□□ 0.17
PTPN11-205ENST00000635625 CD163L1Q9NR16 1453 aa16.11■□□□□ 0.17
PTPN11-205ENST00000635625 KDM2BQ8NHM5 1336 aa16.11■□□□□ 0.17
PTPN11-205ENST00000635625 PDE3AQ14432 1141 aa16.1■□□□□ 0.17
PTPN11-205ENST00000635625 NUTM2DQ5VT03 806 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-205ENST00000635625 CABP2Q9NPB3 220 aa16.1■□□□□ 0.17
PTPN11-205ENST00000635625 RIMS1Q86UR5 1692 aaKnown RBP16.1■□□□□ 0.17
PTPN11-205ENST00000635625 CDC42BPGQ6DT37 1551 aa16.1■□□□□ 0.17
PTPN11-205ENST00000635625 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-205ENST00000635625 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-205ENST00000635625 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
PTPN11-205ENST00000635625 NRXN3Q9Y4C0 1643 aa16.09■□□□□ 0.17
PTPN11-205ENST00000635625 FBXO31Q5XUX0 539 aaPredicted RBP16.08■□□□□ 0.17
PTPN11-205ENST00000635625 CT47B1P0C2W7 299 aaPredicted RBP16.07■□□□□ 0.16
PTPN11-205ENST00000635625 HDGFP51858 240 aaKnown RBP16.07■□□□□ 0.16
PTPN11-205ENST00000635625 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
PTPN11-205ENST00000635625 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
PTPN11-205ENST00000635625 STK26Q9P289 416 aa16.07■□□□□ 0.16
PTPN11-205ENST00000635625 TCP11L2Q8N4U5 519 aa16.06■□□□□ 0.16
PTPN11-205ENST00000635625 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
PTPN11-205ENST00000635625 TECPR2O15040 1411 aa16.06■□□□□ 0.16
PTPN11-205ENST00000635625 CPS1P31327 1500 aa16.06■□□□□ 0.16
PTPN11-205ENST00000635625 FER1L4A9Z1Z3 1794 aa16.06■□□□□ 0.16
PTPN11-205ENST00000635625 FAM135BQ49AJ0 1406 aa16.05■□□□□ 0.16
PTPN11-205ENST00000635625 C20orf194Q5TEA3 1177 aa16.05■□□□□ 0.16
PTPN11-205ENST00000635625 SIRT1Q96EB6 747 aa16.05■□□□□ 0.16
PTPN11-205ENST00000635625 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
PTPN11-205ENST00000635625 NOP58Q9Y2X3 529 aaKnown RBP16.05■□□□□ 0.16
PTPN11-205ENST00000635625 BACH2Q9BYV9 841 aa16.05■□□□□ 0.16
PTPN11-205ENST00000635625 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
PTPN11-205ENST00000635625 PDE4AP27815 886 aa16.04■□□□□ 0.16
PTPN11-205ENST00000635625 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
PTPN11-205ENST00000635625 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
PTPN11-205ENST00000635625 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
PTPN11-205ENST00000635625 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
PTPN11-205ENST00000635625 ESF1Q9H501 851 aaKnown RBP16.03■□□□□ 0.16
PTPN11-205ENST00000635625 UBR1Q8IWV7 1749 aa16.02■□□□□ 0.16
PTPN11-205ENST00000635625 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.15
PTPN11-205ENST00000635625 IL16Q14005 1332 aa16.02■□□□□ 0.15
PTPN11-205ENST00000635625 MON2Q7Z3U7 1717 aa16.01■□□□□ 0.15
PTPN11-205ENST00000635625 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
PTPN11-205ENST00000635625 FYB1O15117 783 aa16.01■□□□□ 0.15
PTPN11-205ENST00000635625 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
PTPN11-205ENST00000635625 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTPN11-205ENST00000635625 EDC4Q6P2E9 1401 aaKnown RBP16.01■□□□□ 0.15
PTPN11-205ENST00000635625 TNRQ92752 1358 aa16■□□□□ 0.15
PTPN11-205ENST00000635625 ITSN1Q15811 1721 aa16■□□□□ 0.15
PTPN11-205ENST00000635625 AKAP12Q02952 1782 aa16■□□□□ 0.15
PTPN11-205ENST00000635625 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
PTPN11-205ENST00000635625 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
PTPN11-205ENST00000635625 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
PTPN11-205ENST00000635625 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
PTPN11-205ENST00000635625 BCAR3O75815 825 aa15.98■□□□□ 0.15
PTPN11-205ENST00000635625 RARSP54136 660 aaKnown RBP15.98■□□□□ 0.15
PTPN11-205ENST00000635625 PLEKHF1Q96S99 279 aa15.97■□□□□ 0.15
PTPN11-205ENST00000635625 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
PTPN11-205ENST00000635625 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
PTPN11-205ENST00000635625 CDK12Q9NYV4 1490 aaPredicted RBP15.96■□□□□ 0.15
PTPN11-205ENST00000635625 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
PTPN11-205ENST00000635625 SPDYE1Q8NFV5 336 aaPredicted RBP15.95■□□□□ 0.14
PTPN11-205ENST00000635625 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
PTPN11-205ENST00000635625 DDRGK1Q96HY6 314 aa15.95■□□□□ 0.14
PTPN11-205ENST00000635625 AATKQ6ZMQ8 1374 aa15.95■□□□□ 0.14
PTPN11-205ENST00000635625 CABP1Q9NZU7 370 aa15.95■□□□□ 0.14
PTPN11-205ENST00000635625 TMEM2Q9UHN6 1383 aa15.95■□□□□ 0.14
PTPN11-205ENST00000635625 C3P01024 1663 aa15.94■□□□□ 0.14
PTPN11-205ENST00000635625 WASLO00401 505 aaPredicted RBP15.94■□□□□ 0.14
PTPN11-205ENST00000635625 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
PTPN11-205ENST00000635625 RRP7AQ9Y3A4 280 aaKnown RBP15.94■□□□□ 0.14
PTPN11-205ENST00000635625 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
PTPN11-205ENST00000635625 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
PTPN11-205ENST00000635625 FCHSD2O94868 740 aa15.93■□□□□ 0.14
PTPN11-205ENST00000635625 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
PTPN11-205ENST00000635625 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
PTPN11-205ENST00000635625 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
PTPN11-205ENST00000635625 MAP2P11137 1827 aaKnown RBP15.93■□□□□ 0.14
PTPN11-205ENST00000635625 TOPAZ1Q8N9V7 1692 aa15.93■□□□□ 0.14
PTPN11-205ENST00000635625 LMTK3Q96Q04 1460 aa15.93■□□□□ 0.14
PTPN11-205ENST00000635625 METP08581 1390 aa15.92■□□□□ 0.14
PTPN11-205ENST00000635625 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
PTPN11-205ENST00000635625 PLEKHG1Q9ULL1 1385 aa15.91■□□□□ 0.14
PTPN11-205ENST00000635625 NEFMP07197 916 aa15.91■□□□□ 0.14
PTPN11-205ENST00000635625 HSPA2P54652 639 aa15.91■□□□□ 0.14
PTPN11-205ENST00000635625 DIP2AQ14689 1571 aa15.9■□□□□ 0.14
PTPN11-205ENST00000635625 CALD1Q05682 793 aaKnown RBP15.9■□□□□ 0.14
PTPN11-205ENST00000635625 ZNF428Q96B54 188 aa15.9■□□□□ 0.14
PTPN11-205ENST00000635625 NRKQ7Z2Y5 1582 aa15.9■□□□□ 0.14
PTPN11-205ENST00000635625 PITPNM1O00562 1244 aa15.9■□□□□ 0.14
PTPN11-205ENST00000635625 WAPLQ7Z5K2 1190 aa15.89■□□□□ 0.13
PTPN11-205ENST00000635625 ZKSCAN2Q63HK3 967 aa15.88■□□□□ 0.13
PTPN11-205ENST00000635625 TRIM35Q9UPQ4 493 aa15.88■□□□□ 0.13
PTPN11-205ENST00000635625 CCDC61Q9Y6R9 512 aa15.88■□□□□ 0.13
PTPN11-205ENST00000635625 SLIT1O75093 1534 aa15.88■□□□□ 0.13
PTPN11-205ENST00000635625 ADAMTS13Q76LX8 1427 aa15.87■□□□□ 0.13
PTPN11-205ENST00000635625 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
PTPN11-205ENST00000635625 PANK1Q8TE04 598 aa15.87■□□□□ 0.13
PTPN11-205ENST00000635625 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-205ENST00000635625 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms