RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 HSCBQ8IWL3 235 aa23.61■■□□□ 1.37
MECP2-218ENST00000629277 ZBTB40Q9NUA8 1239 aa23.61■■□□□ 1.37
MECP2-218ENST00000629277 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
MECP2-218ENST00000629277 A0A1W2PP64 1363 aa23.61■■□□□ 1.37
MECP2-218ENST00000629277 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
MECP2-218ENST00000629277 SRPK2P78362 688 aaKnown RBP23.6■■□□□ 1.37
MECP2-218ENST00000629277 KIDINS220Q9ULH0 1771 aa23.6■■□□□ 1.37
MECP2-218ENST00000629277 USP32Q8NFA0 1604 aa23.59■■□□□ 1.37
MECP2-218ENST00000629277 PPLO60437 1756 aa23.57■■□□□ 1.36
MECP2-218ENST00000629277 LMTK2Q8IWU2 1503 aa23.57■■□□□ 1.36
MECP2-218ENST00000629277 NCBP3Q53F19 620 aaKnown RBP23.57■■□□□ 1.36
MECP2-218ENST00000629277 NSD2O96028 1365 aa23.56■■□□□ 1.36
MECP2-218ENST00000629277 FBLN1P23142 703 aa23.56■■□□□ 1.36
MECP2-218ENST00000629277 FOXD4L1Q9NU39 408 aa23.56■■□□□ 1.36
MECP2-218ENST00000629277 NUCB1Q02818 461 aa23.55■■□□□ 1.36
MECP2-218ENST00000629277 GLI2P10070 1586 aa23.55■■□□□ 1.36
MECP2-218ENST00000629277 FYB1O15117 783 aa23.55■■□□□ 1.36
MECP2-218ENST00000629277 C1orf115Q9H7X2 142 aa23.55■■□□□ 1.36
MECP2-218ENST00000629277 ABCC11Q96J66 1382 aa23.53■■□□□ 1.36
MECP2-218ENST00000629277 CD2BP2O95400 341 aaKnown RBP23.53■■□□□ 1.36
MECP2-218ENST00000629277 DDIT3P35638 169 aa23.53■■□□□ 1.36
MECP2-218ENST00000629277 CHD1LQ86WJ1 897 aa23.52■■□□□ 1.36
MECP2-218ENST00000629277 UBE2Q2Q8WVN8 375 aa23.52■■□□□ 1.36
MECP2-218ENST00000629277 RPGRIP1LQ68CZ1 1315 aa23.52■■□□□ 1.36
MECP2-218ENST00000629277 MINK1Q8N4C8 1332 aaPredicted RBP23.52■■□□□ 1.36
MECP2-218ENST00000629277 ASXL2Q76L83 1435 aa23.52■■□□□ 1.36
MECP2-218ENST00000629277 RBM25P49756 843 aaKnown RBP23.52■■□□□ 1.36
MECP2-218ENST00000629277 TNPO1Q92973 898 aaKnown RBP23.52■■□□□ 1.36
MECP2-218ENST00000629277 COL3A1P02461 1466 aaPredicted RBP23.51■■□□□ 1.35
MECP2-218ENST00000629277 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
MECP2-218ENST00000629277 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
MECP2-218ENST00000629277 GRPEL1Q9HAV7 217 aa23.5■■□□□ 1.35
MECP2-218ENST00000629277 ANKRD45Q5TZF3 282 aa23.49■■□□□ 1.35
MECP2-218ENST00000629277 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
MECP2-218ENST00000629277 DIAPH1O60610 1272 aaKnown RBP23.49■■□□□ 1.35
MECP2-218ENST00000629277 MRE11P49959 708 aa23.49■■□□□ 1.35
MECP2-218ENST00000629277 KIF2CQ99661 725 aa23.49■■□□□ 1.35
MECP2-218ENST00000629277 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
MECP2-218ENST00000629277 KIF16BQ96L93 1317 aa23.49■■□□□ 1.35
MECP2-218ENST00000629277 DDX11L8A8MPP1 907 aa23.48■■□□□ 1.35
MECP2-218ENST00000629277 IPO8O15397 1037 aaKnown RBP23.48■■□□□ 1.35
MECP2-218ENST00000629277 HSP90AB1P08238 724 aaKnown RBP23.48■■□□□ 1.35
MECP2-218ENST00000629277 NCOA3Q9Y6Q9 1424 aa23.48■■□□□ 1.35
MECP2-218ENST00000629277 ARHGEF28Q8N1W1 1705 aaKnown RBP23.48■■□□□ 1.35
MECP2-218ENST00000629277 IL16Q14005 1332 aa23.48■■□□□ 1.35
MECP2-218ENST00000629277 GAS2L3Q86XJ1 694 aa23.47■■□□□ 1.35
MECP2-218ENST00000629277 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
MECP2-218ENST00000629277 ELL2O00472 640 aaPredicted RBP23.47■■□□□ 1.35
MECP2-218ENST00000629277 NAP1L5Q96NT1 182 aaPredicted RBP23.47■■□□□ 1.35
MECP2-218ENST00000629277 CAMSAP1Q5T5Y3 1602 aa23.46■■□□□ 1.35
MECP2-218ENST00000629277 IDI1Q13907 227 aa23.46■■□□□ 1.35
MECP2-218ENST00000629277 SNX21Q969T3 373 aa23.46■■□□□ 1.35
MECP2-218ENST00000629277 PRAM1Q96QH2 718 aa23.46■■□□□ 1.35
MECP2-218ENST00000629277 PNNQ9H307 717 aaKnown RBP23.46■■□□□ 1.35
MECP2-218ENST00000629277 TSPYL6Q8N831 410 aa23.45■■□□□ 1.34
MECP2-218ENST00000629277 PRKAR2BP31323 418 aa23.45■■□□□ 1.34
MECP2-218ENST00000629277 PPIP5K1Q6PFW1 1433 aa23.44■■□□□ 1.34
MECP2-218ENST00000629277 ZBTB7BO15156 539 aaPredicted RBP23.44■■□□□ 1.34
MECP2-218ENST00000629277 CLCN1P35523 988 aa23.44■■□□□ 1.34
MECP2-218ENST00000629277 ERBB4Q15303 1308 aa23.44■■□□□ 1.34
MECP2-218ENST00000629277 HMOX1P09601 288 aa23.43■■□□□ 1.34
MECP2-218ENST00000629277 BMP2KLQ5H9B9 411 aa23.43■■□□□ 1.34
MECP2-218ENST00000629277 PHACTR3Q96KR7 559 aa23.43■■□□□ 1.34
MECP2-218ENST00000629277 ABCC3O15438 1527 aa23.42■■□□□ 1.34
MECP2-218ENST00000629277 ALDH1L2Q3SY69 923 aa23.42■■□□□ 1.34
MECP2-218ENST00000629277 TBC1D9Q6ZT07 1266 aa23.42■■□□□ 1.34
MECP2-218ENST00000629277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.34
MECP2-218ENST00000629277 SIRT2Q8IXJ6 389 aa23.42■■□□□ 1.34
MECP2-218ENST00000629277 TERF2IPQ9NYB0 399 aa23.42■■□□□ 1.34
MECP2-218ENST00000629277 NEXMIFQ5QGS0 1516 aa23.42■■□□□ 1.34
MECP2-218ENST00000629277 HSP90AA1P07900 732 aaKnown RBP23.42■■□□□ 1.34
MECP2-218ENST00000629277 CD163L1Q9NR16 1453 aa23.41■■□□□ 1.34
MECP2-218ENST00000629277 RAB3GAP1Q15042 981 aa23.41■■□□□ 1.34
MECP2-218ENST00000629277 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
MECP2-218ENST00000629277 RAPGEF3O95398 923 aa23.41■■□□□ 1.34
MECP2-218ENST00000629277 SIGLEC1Q9BZZ2 1709 aa23.4■■□□□ 1.34
MECP2-218ENST00000629277 VAMP4O75379 141 aa23.39■■□□□ 1.33
MECP2-218ENST00000629277 POGZQ7Z3K3 1410 aa23.38■■□□□ 1.33
MECP2-218ENST00000629277 MRPL50Q8N5N7 158 aaKnown RBP23.38■■□□□ 1.33
MECP2-218ENST00000629277 HECW2Q9P2P5 1572 aa23.37■■□□□ 1.33
MECP2-218ENST00000629277 SSFA2P28290 1259 aa23.37■■□□□ 1.33
MECP2-218ENST00000629277 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
MECP2-218ENST00000629277 FCHSD2O94868 740 aa23.37■■□□□ 1.33
MECP2-218ENST00000629277 GBP4Q96PP9 640 aa23.37■■□□□ 1.33
MECP2-218ENST00000629277 PNPLA6Q8IY17 1366 aa23.37■■□□□ 1.33
MECP2-218ENST00000629277 ATAD2Q6PL18 1390 aa23.36■■□□□ 1.33
MECP2-218ENST00000629277 CDK19Q9BWU1 502 aa23.36■■□□□ 1.33
MECP2-218ENST00000629277 LRRC7Q96NW7 1537 aa23.35■■□□□ 1.33
MECP2-218ENST00000629277 ESPNB1AK53 854 aa23.35■■□□□ 1.33
MECP2-218ENST00000629277 K7ELQ4 463 aaPredicted RBP23.35■■□□□ 1.33
MECP2-218ENST00000629277 POLKQ9UBT6 870 aa23.35■■□□□ 1.33
MECP2-218ENST00000629277 GCC1Q96CN9 775 aa23.35■■□□□ 1.33
MECP2-218ENST00000629277 HDGFL2Q7Z4V5 671 aaPredicted RBP23.34■■□□□ 1.33
MECP2-218ENST00000629277 CIZ1Q9ULV3 898 aaPredicted RBP23.34■■□□□ 1.33
MECP2-218ENST00000629277 MED14O60244 1454 aa23.34■■□□□ 1.33
MECP2-218ENST00000629277 PTPRMP28827 1452 aa23.33■■□□□ 1.33
MECP2-218ENST00000629277 CFAP74Q9C0B2 1584 aa23.32■■□□□ 1.32
MECP2-218ENST00000629277 MBIPQ9NS73 344 aa23.32■■□□□ 1.32
MECP2-218ENST00000629277 MLH3Q9UHC1 1453 aa23.32■■□□□ 1.32
MECP2-218ENST00000629277 GSPT1P15170 499 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms