RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
FAM3A-222ENST00000621967 CDCA7LQ96GN5 454 aa23.05■■□□□ 1.28
FAM3A-222ENST00000621967 TOPAZ1Q8N9V7 1692 aa23.05■■□□□ 1.28
FAM3A-222ENST00000621967 PPP2R1AP30153 589 aa23.04■■□□□ 1.28
FAM3A-222ENST00000621967 RGPD8O14715 1765 aaPredicted RBP23.04■■□□□ 1.28
FAM3A-222ENST00000621967 MST1RQ04912 1400 aa23.04■■□□□ 1.28
FAM3A-222ENST00000621967 SLC12A5Q9H2X9 1139 aa23.02■■□□□ 1.28
FAM3A-222ENST00000621967 CABP1Q9NZU7 370 aa23.02■■□□□ 1.28
FAM3A-222ENST00000621967 C1orf167Q5SNV9 1468 aa23.02■■□□□ 1.28
FAM3A-222ENST00000621967 EXOC6Q8TAG9 804 aa23.02■■□□□ 1.28
FAM3A-222ENST00000621967 ESCO1Q5FWF5 840 aa23■■□□□ 1.27
FAM3A-222ENST00000621967 IQSEC2Q5JU85 1478 aa23■■□□□ 1.27
FAM3A-222ENST00000621967 ADAMTS8Q9UP79 889 aa22.99■■□□□ 1.27
FAM3A-222ENST00000621967 PMFBP1Q8TBY8 1022 aa22.98■■□□□ 1.27
FAM3A-222ENST00000621967 CERKQ8TCT0 537 aa22.98■■□□□ 1.27
FAM3A-222ENST00000621967 TERF2IPQ9NYB0 399 aa22.98■■□□□ 1.27
FAM3A-222ENST00000621967 SLAIN2Q9P270 581 aa22.98■■□□□ 1.27
FAM3A-222ENST00000621967 PHF8Q9UPP1 1060 aa22.97■■□□□ 1.27
FAM3A-222ENST00000621967 ANKRD36BQ8N2N9 1353 aa22.96■■□□□ 1.27
FAM3A-222ENST00000621967 HDGFL2Q7Z4V5 671 aaPredicted RBP22.96■■□□□ 1.27
FAM3A-222ENST00000621967 ORAI2Q96SN7 254 aa22.96■■□□□ 1.27
FAM3A-222ENST00000621967 PLEKHG3A1L390 1219 aa22.96■■□□□ 1.27
FAM3A-222ENST00000621967 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
FAM3A-222ENST00000621967 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
FAM3A-222ENST00000621967 A0A1W2PP64 1363 aa22.95■■□□□ 1.26
FAM3A-222ENST00000621967 KIF1AQ12756 1690 aa22.94■■□□□ 1.26
FAM3A-222ENST00000621967 ZNF521Q96K83 1311 aa22.94■■□□□ 1.26
FAM3A-222ENST00000621967 ACEP12821 1306 aa22.94■■□□□ 1.26
FAM3A-222ENST00000621967 WDR43Q15061 677 aaKnown RBP eCLIP22.93■■□□□ 1.26
FAM3A-222ENST00000621967 CD163L1Q9NR16 1453 aa22.93■■□□□ 1.26
FAM3A-222ENST00000621967 TOM1O60784 492 aa22.92■■□□□ 1.26
FAM3A-222ENST00000621967 POLR3AO14802 1390 aaPredicted RBP22.91■■□□□ 1.26
FAM3A-222ENST00000621967 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
FAM3A-222ENST00000621967 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
FAM3A-222ENST00000621967 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
FAM3A-222ENST00000621967 BRINP3Q76B58 766 aa22.9■■□□□ 1.26
FAM3A-222ENST00000621967 ZNF692Q9BU19 519 aaPredicted RBP22.9■■□□□ 1.26
FAM3A-222ENST00000621967 MON2Q7Z3U7 1717 aa22.88■■□□□ 1.25
FAM3A-222ENST00000621967 NSD3Q9BZ95 1437 aa22.88■■□□□ 1.25
FAM3A-222ENST00000621967 TCERG1O14776 1098 aaKnown RBP22.88■■□□□ 1.25
FAM3A-222ENST00000621967 FOXO3O43524 673 aa22.88■■□□□ 1.25
FAM3A-222ENST00000621967 DUSP27Q5VZP5 1158 aa22.87■■□□□ 1.25
FAM3A-222ENST00000621967 PSME1Q06323 249 aa22.86■■□□□ 1.25
FAM3A-222ENST00000621967 CARD14Q9BXL6 1004 aa22.86■■□□□ 1.25
FAM3A-222ENST00000621967 USP6P35125 1406 aa22.86■■□□□ 1.25
FAM3A-222ENST00000621967 ROBO1Q9Y6N7 1651 aa22.86■■□□□ 1.25
FAM3A-222ENST00000621967 EDC4Q6P2E9 1401 aaKnown RBP22.85■■□□□ 1.25
FAM3A-222ENST00000621967 PLIN1O60240 522 aa22.85■■□□□ 1.25
FAM3A-222ENST00000621967 NOP58Q9Y2X3 529 aaKnown RBP22.85■■□□□ 1.25
FAM3A-222ENST00000621967 NPHP3Q7Z494 1330 aa22.85■■□□□ 1.25
FAM3A-222ENST00000621967 PIP4K2BP78356 416 aa22.84■■□□□ 1.25
FAM3A-222ENST00000621967 CRBNQ96SW2 442 aa22.83■■□□□ 1.25
FAM3A-222ENST00000621967 NRKQ7Z2Y5 1582 aa22.83■■□□□ 1.24
FAM3A-222ENST00000621967 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
FAM3A-222ENST00000621967 GOLGA2Q08379 1002 aa22.82■■□□□ 1.24
FAM3A-222ENST00000621967 SHPRHQ149N8 1683 aa22.82■■□□□ 1.24
FAM3A-222ENST00000621967 MS4A1P11836 297 aa22.82■■□□□ 1.24
FAM3A-222ENST00000621967 XPCQ01831 940 aaPredicted RBP22.82■■□□□ 1.24
FAM3A-222ENST00000621967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.82■■□□□ 1.24
FAM3A-222ENST00000621967 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
FAM3A-222ENST00000621967 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
FAM3A-222ENST00000621967 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
FAM3A-222ENST00000621967 IPO9Q96P70 1041 aaKnown RBP22.8■■□□□ 1.24
FAM3A-222ENST00000621967 PAK3O75914 559 aaPredicted RBP22.8■■□□□ 1.24
FAM3A-222ENST00000621967 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
FAM3A-222ENST00000621967 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
FAM3A-222ENST00000621967 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
FAM3A-222ENST00000621967 SLFN5Q08AF3 891 aa22.79■■□□□ 1.24
FAM3A-222ENST00000621967 SSH2Q76I76 1423 aa22.78■■□□□ 1.24
FAM3A-222ENST00000621967 TTC21AQ8NDW8 1320 aa22.77■■□□□ 1.24
FAM3A-222ENST00000621967 PXDNQ92626 1479 aa22.77■■□□□ 1.24
FAM3A-222ENST00000621967 KIF20BQ96Q89 1820 aa22.77■■□□□ 1.24
FAM3A-222ENST00000621967 NGEFQ8N5V2 710 aa22.76■■□□□ 1.23
FAM3A-222ENST00000621967 TRPM3Q9HCF6 1732 aaPredicted RBP22.75■■□□□ 1.23
FAM3A-222ENST00000621967 C20orf194Q5TEA3 1177 aa22.75■■□□□ 1.23
FAM3A-222ENST00000621967 NSD2O96028 1365 aa22.75■■□□□ 1.23
FAM3A-222ENST00000621967 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
FAM3A-222ENST00000621967 PDE4AP27815 886 aa22.74■■□□□ 1.23
FAM3A-222ENST00000621967 NME9Q86XW9 330 aa22.74■■□□□ 1.23
FAM3A-222ENST00000621967 BACH2Q9BYV9 841 aa22.74■■□□□ 1.23
FAM3A-222ENST00000621967 SOS2Q07890 1332 aaPredicted RBP22.73■■□□□ 1.23
FAM3A-222ENST00000621967 SBNO1A3KN83 1393 aa22.73■■□□□ 1.23
FAM3A-222ENST00000621967 KDM2BQ8NHM5 1336 aa22.73■■□□□ 1.23
FAM3A-222ENST00000621967 FYB1O15117 783 aa22.72■■□□□ 1.23
FAM3A-222ENST00000621967 LMOD2Q6P5Q4 547 aa22.72■■□□□ 1.23
FAM3A-222ENST00000621967 CCDC146Q8IYE0 955 aa22.72■■□□□ 1.23
FAM3A-222ENST00000621967 ABTB2Q8N961 1025 aa22.72■■□□□ 1.23
FAM3A-222ENST00000621967 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
FAM3A-222ENST00000621967 PIK3C2AO00443 1686 aa22.72■■□□□ 1.23
FAM3A-222ENST00000621967 TNS3Q68CZ2 1445 aa22.72■■□□□ 1.23
FAM3A-222ENST00000621967 APAF1O14727 1248 aa22.71■■□□□ 1.23
FAM3A-222ENST00000621967 PHLPP1O60346 1717 aa22.71■■□□□ 1.23
FAM3A-222ENST00000621967 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.7■■□□□ 1.23
FAM3A-222ENST00000621967 COG3Q96JB2 828 aa22.69■■□□□ 1.22
FAM3A-222ENST00000621967 ANKRD26Q9UPS8 1709 aa22.69■■□□□ 1.22
FAM3A-222ENST00000621967 NUTM2GQ5VZR2 741 aa22.69■■□□□ 1.22
FAM3A-222ENST00000621967 SPATA31A3Q5VYP0 1347 aa22.68■■□□□ 1.22
FAM3A-222ENST00000621967 ALS2Q96Q42 1657 aa22.68■■□□□ 1.22
FAM3A-222ENST00000621967 NLRP6P59044 892 aa22.68■■□□□ 1.22
FAM3A-222ENST00000621967 E9PSI1 815 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms