RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 HECW2Q9P2P5 1572 aa24.71■■□□□ 1.55
PDLIM3-212ENST00000620787 CAMSAP1Q5T5Y3 1602 aa24.71■■□□□ 1.55
PDLIM3-212ENST00000620787 ANKRD26Q9UPS8 1709 aa24.7■■□□□ 1.55
PDLIM3-212ENST00000620787 FRMPD1Q5SYB0 1578 aa24.7■■□□□ 1.54
PDLIM3-212ENST00000620787 TRAK2O60296 914 aa24.7■■□□□ 1.54
PDLIM3-212ENST00000620787 PANK2Q9BZ23 570 aa24.69■■□□□ 1.54
PDLIM3-212ENST00000620787 ABCC11Q96J66 1382 aa24.69■■□□□ 1.54
PDLIM3-212ENST00000620787 HSCBQ8IWL3 235 aa24.68■■□□□ 1.54
PDLIM3-212ENST00000620787 NOB1Q9ULX3 412 aaKnown RBP24.68■■□□□ 1.54
PDLIM3-212ENST00000620787 IL16Q14005 1332 aa24.68■■□□□ 1.54
PDLIM3-212ENST00000620787 SIGLEC1Q9BZZ2 1709 aa24.68■■□□□ 1.54
PDLIM3-212ENST00000620787 TMEM57Q8N5G2 664 aa24.67■■□□□ 1.54
PDLIM3-212ENST00000620787 UBE2Q2Q8WVN8 375 aa24.67■■□□□ 1.54
PDLIM3-212ENST00000620787 CABP2Q9NPB3 220 aa24.67■■□□□ 1.54
PDLIM3-212ENST00000620787 ZBTB40Q9NUA8 1239 aa24.67■■□□□ 1.54
PDLIM3-212ENST00000620787 PIK3C2BO00750 1634 aa24.67■■□□□ 1.54
PDLIM3-212ENST00000620787 A0A1W2PP64 1363 aa24.67■■□□□ 1.54
PDLIM3-212ENST00000620787 NEXMIFQ5QGS0 1516 aa24.66■■□□□ 1.54
PDLIM3-212ENST00000620787 U2SURPO15042 1029 aaKnown RBP24.66■■□□□ 1.54
PDLIM3-212ENST00000620787 DDIT3P35638 169 aa24.66■■□□□ 1.54
PDLIM3-212ENST00000620787 RBM25P49756 843 aaKnown RBP24.65■■□□□ 1.54
PDLIM3-212ENST00000620787 ABCC3O15438 1527 aa24.65■■□□□ 1.54
PDLIM3-212ENST00000620787 DDX11L8A8MPP1 907 aa24.63■■□□□ 1.53
PDLIM3-212ENST00000620787 NUCB1Q02818 461 aa24.63■■□□□ 1.53
PDLIM3-212ENST00000620787 ASXL2Q76L83 1435 aa24.63■■□□□ 1.53
PDLIM3-212ENST00000620787 CFAP74Q9C0B2 1584 aa24.62■■□□□ 1.53
PDLIM3-212ENST00000620787 SNX21Q969T3 373 aa24.62■■□□□ 1.53
PDLIM3-212ENST00000620787 KIF16BQ96L93 1317 aa24.62■■□□□ 1.53
PDLIM3-212ENST00000620787 MRE11P49959 708 aa24.61■■□□□ 1.53
PDLIM3-212ENST00000620787 GGNBP2Q9H3C7 697 aa24.61■■□□□ 1.53
PDLIM3-212ENST00000620787 NUTM2DQ5VT03 806 aaPredicted RBP24.6■■□□□ 1.53
PDLIM3-212ENST00000620787 GGT6Q6P531 493 aa24.6■■□□□ 1.53
PDLIM3-212ENST00000620787 MED14O60244 1454 aa24.59■■□□□ 1.53
PDLIM3-212ENST00000620787 RIPK4P57078 832 aa24.59■■□□□ 1.53
PDLIM3-212ENST00000620787 CLCN1P35523 988 aa24.58■■□□□ 1.53
PDLIM3-212ENST00000620787 IPO8O15397 1037 aaKnown RBP24.58■■□□□ 1.52
PDLIM3-212ENST00000620787 LNPKQ9C0E8 428 aa24.58■■□□□ 1.52
PDLIM3-212ENST00000620787 VGFO15240 615 aaPredicted RBP24.57■■□□□ 1.52
PDLIM3-212ENST00000620787 POGZQ7Z3K3 1410 aa24.57■■□□□ 1.52
PDLIM3-212ENST00000620787 MLH3Q9UHC1 1453 aa24.57■■□□□ 1.52
PDLIM3-212ENST00000620787 SAFB2Q14151 953 aaKnown RBP eCLIP24.57■■□□□ 1.52
PDLIM3-212ENST00000620787 CHD1LQ86WJ1 897 aa24.57■■□□□ 1.52
PDLIM3-212ENST00000620787 ALDH1L2Q3SY69 923 aa24.56■■□□□ 1.52
PDLIM3-212ENST00000620787 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
PDLIM3-212ENST00000620787 GRPEL1Q9HAV7 217 aa24.56■■□□□ 1.52
PDLIM3-212ENST00000620787 CD163L1Q9NR16 1453 aa24.55■■□□□ 1.52
PDLIM3-212ENST00000620787 FYB1O15117 783 aa24.54■■□□□ 1.52
PDLIM3-212ENST00000620787 TNPO1Q92973 898 aaKnown RBP24.54■■□□□ 1.52
PDLIM3-212ENST00000620787 ISY1Q9ULR0 285 aaKnown RBP24.54■■□□□ 1.52
PDLIM3-212ENST00000620787 CIZ1Q9ULV3 898 aaPredicted RBP24.54■■□□□ 1.52
PDLIM3-212ENST00000620787 CDC42BPGQ6DT37 1551 aa24.54■■□□□ 1.52
PDLIM3-212ENST00000620787 BMP2KLQ5H9B9 411 aa24.53■■□□□ 1.52
PDLIM3-212ENST00000620787 LRRC7Q96NW7 1537 aa24.53■■□□□ 1.52
PDLIM3-212ENST00000620787 KIF20BQ96Q89 1820 aa24.53■■□□□ 1.52
PDLIM3-212ENST00000620787 PNPLA6Q8IY17 1366 aa24.53■■□□□ 1.52
PDLIM3-212ENST00000620787 SRPK2P78362 688 aaKnown RBP24.52■■□□□ 1.52
PDLIM3-212ENST00000620787 KIF2CQ99661 725 aa24.52■■□□□ 1.52
PDLIM3-212ENST00000620787 DIAPH1O60610 1272 aaKnown RBP24.51■■□□□ 1.51
PDLIM3-212ENST00000620787 PNNQ9H307 717 aaKnown RBP24.51■■□□□ 1.51
PDLIM3-212ENST00000620787 PTPRMP28827 1452 aa24.51■■□□□ 1.51
PDLIM3-212ENST00000620787 RAB3GAP1Q15042 981 aa24.51■■□□□ 1.51
PDLIM3-212ENST00000620787 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
PDLIM3-212ENST00000620787 MYO5BQ9ULV0 1848 aa24.51■■□□□ 1.51
PDLIM3-212ENST00000620787 ATAD2Q6PL18 1390 aa24.5■■□□□ 1.51
PDLIM3-212ENST00000620787 BRPF1P55201 1214 aaPredicted RBP24.5■■□□□ 1.51
PDLIM3-212ENST00000620787 HSP90AB1P08238 724 aaKnown RBP24.5■■□□□ 1.51
PDLIM3-212ENST00000620787 ZFYVE9O95405 1425 aa24.49■■□□□ 1.51
PDLIM3-212ENST00000620787 TERF2IPQ9NYB0 399 aa24.49■■□□□ 1.51
PDLIM3-212ENST00000620787 STK26Q9P289 416 aa24.47■■□□□ 1.51
PDLIM3-212ENST00000620787 GBP4Q96PP9 640 aa24.47■■□□□ 1.51
PDLIM3-212ENST00000620787 PIK3R4Q99570 1358 aa24.47■■□□□ 1.51
PDLIM3-212ENST00000620787 ZBTB7BO15156 539 aaPredicted RBP24.46■■□□□ 1.51
PDLIM3-212ENST00000620787 FAM135BQ49AJ0 1406 aa24.46■■□□□ 1.51
PDLIM3-212ENST00000620787 CD2BP2O95400 341 aaKnown RBP24.46■■□□□ 1.51
PDLIM3-212ENST00000620787 PTCH1Q13635 1447 aa24.46■■□□□ 1.51
PDLIM3-212ENST00000620787 GCC1Q96CN9 775 aa24.46■■□□□ 1.51
PDLIM3-212ENST00000620787 NAP1L5Q96NT1 182 aaPredicted RBP24.46■■□□□ 1.51
PDLIM3-212ENST00000620787 ANKRD45Q5TZF3 282 aa24.45■■□□□ 1.51
PDLIM3-212ENST00000620787 ZNF428Q96B54 188 aa24.45■■□□□ 1.51
PDLIM3-212ENST00000620787 GAS2L3Q86XJ1 694 aa24.45■■□□□ 1.5
PDLIM3-212ENST00000620787 FCHSD2O94868 740 aa24.44■■□□□ 1.5
PDLIM3-212ENST00000620787 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
PDLIM3-212ENST00000620787 REREQ9P2R6 1566 aa24.43■■□□□ 1.5
PDLIM3-212ENST00000620787 TBC1D9Q6ZT07 1266 aa24.43■■□□□ 1.5
PDLIM3-212ENST00000620787 ERBB4Q15303 1308 aa24.43■■□□□ 1.5
PDLIM3-212ENST00000620787 SKOR2Q2VWA4 1001 aaPredicted RBP24.42■■□□□ 1.5
PDLIM3-212ENST00000620787 MRPL50Q8N5N7 158 aaKnown RBP24.42■■□□□ 1.5
PDLIM3-212ENST00000620787 C1orf115Q9H7X2 142 aa24.42■■□□□ 1.5
PDLIM3-212ENST00000620787 ESPNB1AK53 854 aa24.42■■□□□ 1.5
PDLIM3-212ENST00000620787 K7ELQ4 463 aaPredicted RBP24.41■■□□□ 1.5
PDLIM3-212ENST00000620787 PTMSP20962 102 aa24.41■■□□□ 1.5
PDLIM3-212ENST00000620787 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
PDLIM3-212ENST00000620787 IDI1Q13907 227 aa24.41■■□□□ 1.5
PDLIM3-212ENST00000620787 ARHGAP45Q92619 1136 aa24.41■■□□□ 1.5
PDLIM3-212ENST00000620787 ARHGAP31Q2M1Z3 1444 aa24.41■■□□□ 1.5
PDLIM3-212ENST00000620787 VAMP4O75379 141 aa24.4■■□□□ 1.5
PDLIM3-212ENST00000620787 PRAM1Q96QH2 718 aa24.4■■□□□ 1.5
PDLIM3-212ENST00000620787 SIRT2Q8IXJ6 389 aa24.39■■□□□ 1.5
PDLIM3-212ENST00000620787 CHMP4BQ9H444 224 aaKnown RBP24.39■■□□□ 1.5
PDLIM3-212ENST00000620787 RBM42Q9BTD8 480 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms