RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 CLTCQ00610 1675 aaKnown RBP24.7■■□□□ 1.54
PCDHGB3-202ENST00000618934 PMFBP1Q8TBY8 1022 aa24.7■■□□□ 1.54
PCDHGB3-202ENST00000618934 DAXXQ9UER7 740 aaPredicted RBP24.7■■□□□ 1.54
PCDHGB3-202ENST00000618934 STAG3Q9UJ98 1225 aa24.7■■□□□ 1.54
PCDHGB3-202ENST00000618934 PDZRN3Q9UPQ7 1066 aa24.7■■□□□ 1.54
PCDHGB3-202ENST00000618934 MAPK8IP3Q9UPT6 1336 aa24.69■■□□□ 1.54
PCDHGB3-202ENST00000618934 NFKBIBQ15653 356 aa24.69■■□□□ 1.54
PCDHGB3-202ENST00000618934 ARHGEF40Q8TER5 1519 aa24.69■■□□□ 1.54
PCDHGB3-202ENST00000618934 FAM69CQ0P6D2 419 aa24.69■■□□□ 1.54
PCDHGB3-202ENST00000618934 ANKRD26Q9UPS8 1709 aa24.68■■□□□ 1.54
PCDHGB3-202ENST00000618934 MVPQ14764 893 aaKnown RBP24.68■■□□□ 1.54
PCDHGB3-202ENST00000618934 ZKSCAN2Q63HK3 967 aa24.67■■□□□ 1.54
PCDHGB3-202ENST00000618934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.67■■□□□ 1.54
PCDHGB3-202ENST00000618934 SSH1Q8WYL5 1049 aa24.67■■□□□ 1.54
PCDHGB3-202ENST00000618934 RIPK4P57078 832 aa24.66■■□□□ 1.54
PCDHGB3-202ENST00000618934 HDGFL2Q7Z4V5 671 aaPredicted RBP24.66■■□□□ 1.54
PCDHGB3-202ENST00000618934 DZIP1LQ8IYY4 767 aaKnown RBP24.66■■□□□ 1.54
PCDHGB3-202ENST00000618934 SMC4Q9NTJ3 1288 aa24.66■■□□□ 1.54
PCDHGB3-202ENST00000618934 DIAPH1O60610 1272 aaKnown RBP24.65■■□□□ 1.54
PCDHGB3-202ENST00000618934 MED14O60244 1454 aa24.65■■□□□ 1.54
PCDHGB3-202ENST00000618934 TRIM27P14373 513 aa24.64■■□□□ 1.54
PCDHGB3-202ENST00000618934 AAMPQ13685 434 aa24.64■■□□□ 1.53
PCDHGB3-202ENST00000618934 TSPOAP1O95153 1857 aa24.64■■□□□ 1.53
PCDHGB3-202ENST00000618934 PNPLA6Q8IY17 1366 aa24.64■■□□□ 1.53
PCDHGB3-202ENST00000618934 FTSJ3Q8IY81 847 aaKnown RBP24.63■■□□□ 1.53
PCDHGB3-202ENST00000618934 MLECQ14165 292 aa24.62■■□□□ 1.53
PCDHGB3-202ENST00000618934 RWDD1Q9H446 243 aaPredicted RBP24.62■■□□□ 1.53
PCDHGB3-202ENST00000618934 NOB1Q9ULX3 412 aaKnown RBP24.61■■□□□ 1.53
PCDHGB3-202ENST00000618934 KIF20BQ96Q89 1820 aa24.6■■□□□ 1.53
PCDHGB3-202ENST00000618934 CT47B1P0C2W7 299 aaPredicted RBP24.6■■□□□ 1.53
PCDHGB3-202ENST00000618934 POLKQ9UBT6 870 aa24.6■■□□□ 1.53
PCDHGB3-202ENST00000618934 A2ML1A8K2U0 1454 aa24.59■■□□□ 1.53
PCDHGB3-202ENST00000618934 ATF7IPQ6VMQ6 1270 aa24.56■■□□□ 1.52
PCDHGB3-202ENST00000618934 ITPRIPQ8IWB1 547 aa24.56■■□□□ 1.52
PCDHGB3-202ENST00000618934 ZRANB1Q9UGI0 708 aa24.56■■□□□ 1.52
PCDHGB3-202ENST00000618934 IL16Q14005 1332 aa24.56■■□□□ 1.52
PCDHGB3-202ENST00000618934 PRKAR2BP31323 418 aa24.56■■□□□ 1.52
PCDHGB3-202ENST00000618934 RSPH6AQ9H0K4 717 aa24.56■■□□□ 1.52
PCDHGB3-202ENST00000618934 RIMS2Q9UQ26 1411 aa24.56■■□□□ 1.52
PCDHGB3-202ENST00000618934 FRAT2O75474 233 aaPredicted RBP24.55■■□□□ 1.52
PCDHGB3-202ENST00000618934 PHACTR3Q96KR7 559 aa24.55■■□□□ 1.52
PCDHGB3-202ENST00000618934 LRRC7Q96NW7 1537 aa24.55■■□□□ 1.52
PCDHGB3-202ENST00000618934 TMEM57Q8N5G2 664 aa24.55■■□□□ 1.52
PCDHGB3-202ENST00000618934 HMOX1P09601 288 aa24.54■■□□□ 1.52
PCDHGB3-202ENST00000618934 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
PCDHGB3-202ENST00000618934 SETD1AO15047 1707 aaKnown RBP24.54■■□□□ 1.52
PCDHGB3-202ENST00000618934 MAP2P11137 1827 aaKnown RBP24.54■■□□□ 1.52
PCDHGB3-202ENST00000618934 DIP2BQ9P265 1576 aa24.53■■□□□ 1.52
PCDHGB3-202ENST00000618934 FCHSD2O94868 740 aa24.53■■□□□ 1.52
PCDHGB3-202ENST00000618934 THUMPD2Q9BTF0 503 aaKnown RBP24.53■■□□□ 1.52
PCDHGB3-202ENST00000618934 EMILIN1Q9Y6C2 1016 aa24.53■■□□□ 1.52
PCDHGB3-202ENST00000618934 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
PCDHGB3-202ENST00000618934 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
PCDHGB3-202ENST00000618934 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
PCDHGB3-202ENST00000618934 NME9Q86XW9 330 aa24.51■■□□□ 1.51
PCDHGB3-202ENST00000618934 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
PCDHGB3-202ENST00000618934 DDX19BQ9UMR2 479 aa24.5■■□□□ 1.51
PCDHGB3-202ENST00000618934 METP08581 1390 aa24.5■■□□□ 1.51
PCDHGB3-202ENST00000618934 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
PCDHGB3-202ENST00000618934 DLC1Q96QB1 1528 aa24.49■■□□□ 1.51
PCDHGB3-202ENST00000618934 SPATA31D1Q6ZQQ2 1576 aa24.49■■□□□ 1.51
PCDHGB3-202ENST00000618934 TBC1D32Q96NH3 1257 aa24.49■■□□□ 1.51
PCDHGB3-202ENST00000618934 CDC42BPGQ6DT37 1551 aa24.48■■□□□ 1.51
PCDHGB3-202ENST00000618934 AGLP35573 1532 aa24.48■■□□□ 1.51
PCDHGB3-202ENST00000618934 HDAC1Q13547 482 aaPredicted RBP24.48■■□□□ 1.51
PCDHGB3-202ENST00000618934 ZBTB40Q9NUA8 1239 aa24.48■■□□□ 1.51
PCDHGB3-202ENST00000618934 ATP7BP35670 1465 aa24.48■■□□□ 1.51
PCDHGB3-202ENST00000618934 PNNQ9H307 717 aaKnown RBP24.47■■□□□ 1.51
PCDHGB3-202ENST00000618934 WASLO00401 505 aaPredicted RBP24.47■■□□□ 1.51
PCDHGB3-202ENST00000618934 GSE1Q14687 1217 aa24.47■■□□□ 1.51
PCDHGB3-202ENST00000618934 NRXN3Q9Y4C0 1643 aa24.46■■□□□ 1.51
PCDHGB3-202ENST00000618934 ZMYM3Q14202 1370 aa24.46■■□□□ 1.51
PCDHGB3-202ENST00000618934 PPP6R1Q9UPN7 881 aa24.46■■□□□ 1.51
PCDHGB3-202ENST00000618934 CPSF1Q10570 1443 aaKnown RBP24.45■■□□□ 1.51
PCDHGB3-202ENST00000618934 PPIP5K1Q6PFW1 1433 aa24.45■■□□□ 1.51
PCDHGB3-202ENST00000618934 IL13P35225 146 aa24.45■■□□□ 1.5
PCDHGB3-202ENST00000618934 TSPYL6Q8N831 410 aa24.45■■□□□ 1.5
PCDHGB3-202ENST00000618934 IL27Q8NEV9 243 aa24.45■■□□□ 1.5
PCDHGB3-202ENST00000618934 REREQ9P2R6 1566 aa24.45■■□□□ 1.5
PCDHGB3-202ENST00000618934 NFE2L2Q16236 605 aa24.44■■□□□ 1.5
PCDHGB3-202ENST00000618934 SLKQ9H2G2 1235 aaPredicted RBP24.44■■□□□ 1.5
PCDHGB3-202ENST00000618934 RRS1Q15050 365 aaKnown RBP24.43■■□□□ 1.5
PCDHGB3-202ENST00000618934 SMC5Q8IY18 1101 aa24.43■■□□□ 1.5
PCDHGB3-202ENST00000618934 NUDT16Q96DE0 195 aaKnown RBP24.42■■□□□ 1.5
PCDHGB3-202ENST00000618934 KIF16BQ96L93 1317 aa24.42■■□□□ 1.5
PCDHGB3-202ENST00000618934 ELL2O00472 640 aaPredicted RBP24.42■■□□□ 1.5
PCDHGB3-202ENST00000618934 ALDH1L2Q3SY69 923 aa24.42■■□□□ 1.5
PCDHGB3-202ENST00000618934 CPS1P31327 1500 aa24.41■■□□□ 1.5
PCDHGB3-202ENST00000618934 VAMP4O75379 141 aa24.41■■□□□ 1.5
PCDHGB3-202ENST00000618934 IPO8O15397 1037 aaKnown RBP24.41■■□□□ 1.5
PCDHGB3-202ENST00000618934 UPF2Q9HAU5 1272 aaKnown RBP24.41■■□□□ 1.5
PCDHGB3-202ENST00000618934 EDC4Q6P2E9 1401 aaKnown RBP24.41■■□□□ 1.5
PCDHGB3-202ENST00000618934 BECN1Q14457 450 aa24.4■■□□□ 1.5
PCDHGB3-202ENST00000618934 TBC1D2Q9BYX2 928 aa24.4■■□□□ 1.5
PCDHGB3-202ENST00000618934 ANTXR1Q9H6X2 564 aa24.38■■□□□ 1.49
PCDHGB3-202ENST00000618934 MBIPQ9NS73 344 aa24.37■■□□□ 1.49
PCDHGB3-202ENST00000618934 FAM83GA6ND36 823 aa24.37■■□□□ 1.49
PCDHGB3-202ENST00000618934 MFAP1P55081 439 aaKnown RBP24.37■■□□□ 1.49
PCDHGB3-202ENST00000618934 MRPL50Q8N5N7 158 aaKnown RBP24.37■■□□□ 1.49
PCDHGB3-202ENST00000618934 C1orf115Q9H7X2 142 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms