RNA–Protein interactions for RNA: ENST00000616590.4

GRIA3-206, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 2 BASIC

Gene GRIA3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-206ENST00000616590 NGLY1Q96IV0 654 aa13.38□□□□□ -0.27
GRIA3-206ENST00000616590 CABP1Q9NZU7 370 aa13.38□□□□□ -0.27
GRIA3-206ENST00000616590 PPIP5K1Q6PFW1 1433 aa13.37□□□□□ -0.27
GRIA3-206ENST00000616590 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
GRIA3-206ENST00000616590 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
GRIA3-206ENST00000616590 AFF2P51816 1311 aa13.36□□□□□ -0.27
GRIA3-206ENST00000616590 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
GRIA3-206ENST00000616590 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
GRIA3-206ENST00000616590 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
GRIA3-206ENST00000616590 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
GRIA3-206ENST00000616590 USP47Q96K76 1375 aa13.33□□□□□ -0.27
GRIA3-206ENST00000616590 ITSN1Q15811 1721 aa13.32□□□□□ -0.28
GRIA3-206ENST00000616590 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
GRIA3-206ENST00000616590 TOPAZ1Q8N9V7 1692 aa13.31□□□□□ -0.28
GRIA3-206ENST00000616590 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
GRIA3-206ENST00000616590 ABTB2Q8N961 1025 aa13.31□□□□□ -0.28
GRIA3-206ENST00000616590 TESK2Q96S53 571 aa13.31□□□□□ -0.28
GRIA3-206ENST00000616590 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
GRIA3-206ENST00000616590 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
GRIA3-206ENST00000616590 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
GRIA3-206ENST00000616590 USP21Q9UK80 565 aa13.3□□□□□ -0.28
GRIA3-206ENST00000616590 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
GRIA3-206ENST00000616590 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
GRIA3-206ENST00000616590 ZBTB7CA1YPR0 619 aa13.28□□□□□ -0.28
GRIA3-206ENST00000616590 ATAD2Q6PL18 1390 aa13.28□□□□□ -0.28
GRIA3-206ENST00000616590 SBNO2Q9Y2G9 1366 aa13.28□□□□□ -0.28
GRIA3-206ENST00000616590 FAM83GA6ND36 823 aa13.27□□□□□ -0.29
GRIA3-206ENST00000616590 RXRBP28702 533 aa13.27□□□□□ -0.29
GRIA3-206ENST00000616590 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
GRIA3-206ENST00000616590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.29
GRIA3-206ENST00000616590 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.29
GRIA3-206ENST00000616590 USP6P35125 1406 aa13.26□□□□□ -0.29
GRIA3-206ENST00000616590 NLRP6P59044 892 aa13.26□□□□□ -0.29
GRIA3-206ENST00000616590 TMF1P82094 1093 aa13.26□□□□□ -0.29
GRIA3-206ENST00000616590 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
GRIA3-206ENST00000616590 FNBP4Q8N3X1 1017 aaPredicted RBP13.26□□□□□ -0.29
GRIA3-206ENST00000616590 ALS2Q96Q42 1657 aa13.26□□□□□ -0.29
GRIA3-206ENST00000616590 SOX12O15370 315 aa13.25□□□□□ -0.29
GRIA3-206ENST00000616590 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
GRIA3-206ENST00000616590 CHRNA2Q15822 529 aa13.25□□□□□ -0.29
GRIA3-206ENST00000616590 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
GRIA3-206ENST00000616590 TTC21BQ7Z4L5 1316 aa13.24□□□□□ -0.29
GRIA3-206ENST00000616590 SOCS7O14512 581 aa13.24□□□□□ -0.29
GRIA3-206ENST00000616590 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
GRIA3-206ENST00000616590 NLRP13Q86W25 1043 aa13.24□□□□□ -0.29
GRIA3-206ENST00000616590 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
GRIA3-206ENST00000616590 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
GRIA3-206ENST00000616590 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
GRIA3-206ENST00000616590 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
GRIA3-206ENST00000616590 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
GRIA3-206ENST00000616590 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
GRIA3-206ENST00000616590 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
GRIA3-206ENST00000616590 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
GRIA3-206ENST00000616590 KIAA0232Q92628 1395 aa13.22□□□□□ -0.29
GRIA3-206ENST00000616590 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
GRIA3-206ENST00000616590 NME9Q86XW9 330 aa13.22□□□□□ -0.29
GRIA3-206ENST00000616590 UNC5CLQ8IV45 518 aa13.22□□□□□ -0.29
GRIA3-206ENST00000616590 TERF2IPQ9NYB0 399 aa13.22□□□□□ -0.29
GRIA3-206ENST00000616590 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
GRIA3-206ENST00000616590 GCP02774 474 aa13.21□□□□□ -0.29
GRIA3-206ENST00000616590 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
GRIA3-206ENST00000616590 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.3
GRIA3-206ENST00000616590 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
GRIA3-206ENST00000616590 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
GRIA3-206ENST00000616590 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
GRIA3-206ENST00000616590 SSH2Q76I76 1423 aa13.2□□□□□ -0.3
GRIA3-206ENST00000616590 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
GRIA3-206ENST00000616590 SLIT2O94813 1529 aa13.19□□□□□ -0.3
GRIA3-206ENST00000616590 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
GRIA3-206ENST00000616590 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
GRIA3-206ENST00000616590 ATRNO75882 1429 aa13.19□□□□□ -0.3
GRIA3-206ENST00000616590 USP19O94966 1318 aa13.18□□□□□ -0.3
GRIA3-206ENST00000616590 AKAP12Q02952 1782 aa13.18□□□□□ -0.3
GRIA3-206ENST00000616590 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
GRIA3-206ENST00000616590 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
GRIA3-206ENST00000616590 BRD4O60885 1362 aaPredicted RBP13.18□□□□□ -0.3
GRIA3-206ENST00000616590 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
GRIA3-206ENST00000616590 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
GRIA3-206ENST00000616590 CRYBG1Q9Y4K1 1723 aa13.17□□□□□ -0.3
GRIA3-206ENST00000616590 EVA1CP58658 441 aa13.17□□□□□ -0.3
GRIA3-206ENST00000616590 C1QBPQ07021 282 aaKnown RBP13.17□□□□□ -0.3
GRIA3-206ENST00000616590 PIK3C2AO00443 1686 aa13.17□□□□□ -0.3
GRIA3-206ENST00000616590 PLCH1Q4KWH8 1693 aa13.17□□□□□ -0.3
GRIA3-206ENST00000616590 A0A0G2JS52 829 aa13.16□□□□□ -0.3
GRIA3-206ENST00000616590 MYT1Q01538 1121 aa13.16□□□□□ -0.3
GRIA3-206ENST00000616590 VPS72Q15906 364 aa13.16□□□□□ -0.3
GRIA3-206ENST00000616590 RGS12O14924 1447 aa13.15□□□□□ -0.3
GRIA3-206ENST00000616590 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
GRIA3-206ENST00000616590 USP35Q9P2H5 1018 aa13.15□□□□□ -0.3
GRIA3-206ENST00000616590 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
GRIA3-206ENST00000616590 COL14A1Q05707 1796 aaKnown RBP13.15□□□□□ -0.31
GRIA3-206ENST00000616590 EDC4Q6P2E9 1401 aaKnown RBP13.14□□□□□ -0.31
GRIA3-206ENST00000616590 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
GRIA3-206ENST00000616590 FBLN1P23142 703 aa13.14□□□□□ -0.31
GRIA3-206ENST00000616590 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
GRIA3-206ENST00000616590 ANKRD36BQ8N2N9 1353 aa13.13□□□□□ -0.31
GRIA3-206ENST00000616590 NINLQ9Y2I6 1382 aa13.13□□□□□ -0.31
GRIA3-206ENST00000616590 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
GRIA3-206ENST00000616590 CARD14Q9BXL6 1004 aa13.13□□□□□ -0.31
GRIA3-206ENST00000616590 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms