RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 USP19O94966 1318 aa19.04■□□□□ 0.64
POLR2E-213ENST00000615234 TERF2IPQ9NYB0 399 aa19.03■□□□□ 0.64
POLR2E-213ENST00000615234 MED14O60244 1454 aa19.03■□□□□ 0.64
POLR2E-213ENST00000615234 U2SURPO15042 1029 aaKnown RBP19.02■□□□□ 0.64
POLR2E-213ENST00000615234 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
POLR2E-213ENST00000615234 POGKQ9P215 609 aa19.02■□□□□ 0.64
POLR2E-213ENST00000615234 TMPOP42166 694 aaKnown RBP19.01■□□□□ 0.63
POLR2E-213ENST00000615234 TSR2Q969E8 191 aaKnown RBP19.01■□□□□ 0.63
POLR2E-213ENST00000615234 MLECQ14165 292 aa19.01■□□□□ 0.63
POLR2E-213ENST00000615234 TRIM35Q9UPQ4 493 aa19.01■□□□□ 0.63
POLR2E-213ENST00000615234 ALKQ9UM73 1620 aa19■□□□□ 0.63
POLR2E-213ENST00000615234 NFKBIBQ15653 356 aa19■□□□□ 0.63
POLR2E-213ENST00000615234 SEC24BO95487 1268 aa19■□□□□ 0.63
POLR2E-213ENST00000615234 CT47B1P0C2W7 299 aaPredicted RBP19■□□□□ 0.63
POLR2E-213ENST00000615234 MVPQ14764 893 aaKnown RBP18.99■□□□□ 0.63
POLR2E-213ENST00000615234 ZKSCAN2Q63HK3 967 aa18.98■□□□□ 0.63
POLR2E-213ENST00000615234 ARHGEF40Q8TER5 1519 aa18.98■□□□□ 0.63
POLR2E-213ENST00000615234 EXOSC9Q06265 439 aaKnown RBP18.98■□□□□ 0.63
POLR2E-213ENST00000615234 CDK19Q9BWU1 502 aa18.97■□□□□ 0.63
POLR2E-213ENST00000615234 PDZRN3Q9UPQ7 1066 aa18.97■□□□□ 0.63
POLR2E-213ENST00000615234 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
POLR2E-213ENST00000615234 PNPLA6Q8IY17 1366 aa18.96■□□□□ 0.63
POLR2E-213ENST00000615234 DZIP1LQ8IYY4 767 aaKnown RBP18.96■□□□□ 0.63
POLR2E-213ENST00000615234 HDGFL2Q7Z4V5 671 aaPredicted RBP18.96■□□□□ 0.63
POLR2E-213ENST00000615234 ZMYM3Q14202 1370 aa18.95■□□□□ 0.62
POLR2E-213ENST00000615234 CABP1Q9NZU7 370 aa18.95■□□□□ 0.62
POLR2E-213ENST00000615234 IL16Q14005 1332 aa18.94■□□□□ 0.62
POLR2E-213ENST00000615234 DIAPH1O60610 1272 aaKnown RBP18.94■□□□□ 0.62
POLR2E-213ENST00000615234 SMC4Q9NTJ3 1288 aa18.94■□□□□ 0.62
POLR2E-213ENST00000615234 KIF20BQ96Q89 1820 aa18.94■□□□□ 0.62
POLR2E-213ENST00000615234 FTSJ3Q8IY81 847 aaKnown RBP18.94■□□□□ 0.62
POLR2E-213ENST00000615234 SSH1Q8WYL5 1049 aa18.94■□□□□ 0.62
POLR2E-213ENST00000615234 RIPK4P57078 832 aa18.93■□□□□ 0.62
POLR2E-213ENST00000615234 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
POLR2E-213ENST00000615234 TRIM27P14373 513 aa18.92■□□□□ 0.62
POLR2E-213ENST00000615234 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
POLR2E-213ENST00000615234 CDC42BPGQ6DT37 1551 aa18.9■□□□□ 0.62
POLR2E-213ENST00000615234 DLC1Q96QB1 1528 aa18.89■□□□□ 0.62
POLR2E-213ENST00000615234 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.61
POLR2E-213ENST00000615234 WAPLQ7Z5K2 1190 aa18.89■□□□□ 0.61
POLR2E-213ENST00000615234 PNNQ9H307 717 aaKnown RBP18.89■□□□□ 0.61
POLR2E-213ENST00000615234 A2ML1A8K2U0 1454 aa18.89■□□□□ 0.61
POLR2E-213ENST00000615234 NOB1Q9ULX3 412 aaKnown RBP18.88■□□□□ 0.61
POLR2E-213ENST00000615234 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
POLR2E-213ENST00000615234 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
POLR2E-213ENST00000615234 FCHSD2O94868 740 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.87■□□□□ 0.61
POLR2E-213ENST00000615234 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 ATP7BP35670 1465 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 FBLN1P23142 703 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 GSE1Q14687 1217 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 POLKQ9UBT6 870 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 AGLP35573 1532 aa18.87■□□□□ 0.61
POLR2E-213ENST00000615234 FRAT2O75474 233 aaPredicted RBP18.86■□□□□ 0.61
POLR2E-213ENST00000615234 HDAC1Q13547 482 aaPredicted RBP18.86■□□□□ 0.61
POLR2E-213ENST00000615234 ITPRIPQ8IWB1 547 aa18.86■□□□□ 0.61
POLR2E-213ENST00000615234 RSPH6AQ9H0K4 717 aa18.86■□□□□ 0.61
POLR2E-213ENST00000615234 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
POLR2E-213ENST00000615234 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
POLR2E-213ENST00000615234 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
POLR2E-213ENST00000615234 TBC1D32Q96NH3 1257 aa18.85■□□□□ 0.61
POLR2E-213ENST00000615234 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
POLR2E-213ENST00000615234 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
POLR2E-213ENST00000615234 TMEM57Q8N5G2 664 aa18.84■□□□□ 0.61
POLR2E-213ENST00000615234 BECN1Q14457 450 aa18.84■□□□□ 0.61
POLR2E-213ENST00000615234 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.61
POLR2E-213ENST00000615234 MAP2P11137 1827 aaKnown RBP18.83■□□□□ 0.6
POLR2E-213ENST00000615234 KIF16BQ96L93 1317 aa18.83■□□□□ 0.6
POLR2E-213ENST00000615234 ALDH1L2Q3SY69 923 aa18.82■□□□□ 0.6
POLR2E-213ENST00000615234 ZBTB40Q9NUA8 1239 aa18.82■□□□□ 0.6
POLR2E-213ENST00000615234 IPO8O15397 1037 aaKnown RBP18.81■□□□□ 0.6
POLR2E-213ENST00000615234 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
POLR2E-213ENST00000615234 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
POLR2E-213ENST00000615234 PHACTR3Q96KR7 559 aa18.8■□□□□ 0.6
POLR2E-213ENST00000615234 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
POLR2E-213ENST00000615234 PPIP5K1Q6PFW1 1433 aa18.79■□□□□ 0.6
POLR2E-213ENST00000615234 HMOX1P09601 288 aa18.78■□□□□ 0.6
POLR2E-213ENST00000615234 NFE2L2Q16236 605 aa18.78■□□□□ 0.6
POLR2E-213ENST00000615234 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
POLR2E-213ENST00000615234 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
POLR2E-213ENST00000615234 WASLO00401 505 aaPredicted RBP18.78■□□□□ 0.6
POLR2E-213ENST00000615234 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
POLR2E-213ENST00000615234 NME9Q86XW9 330 aa18.77■□□□□ 0.6
POLR2E-213ENST00000615234 IL13P35225 146 aa18.77■□□□□ 0.59
POLR2E-213ENST00000615234 IL27Q8NEV9 243 aa18.77■□□□□ 0.59
POLR2E-213ENST00000615234 TBC1D2Q9BYX2 928 aa18.77■□□□□ 0.59
POLR2E-213ENST00000615234 METP08581 1390 aa18.77■□□□□ 0.59
POLR2E-213ENST00000615234 ZNF428Q96B54 188 aa18.76■□□□□ 0.59
POLR2E-213ENST00000615234 THUMPD2Q9BTF0 503 aaKnown RBP18.76■□□□□ 0.59
POLR2E-213ENST00000615234 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
POLR2E-213ENST00000615234 ANTXR1Q9H6X2 564 aa18.76■□□□□ 0.59
POLR2E-213ENST00000615234 ZRANB1Q9UGI0 708 aa18.76■□□□□ 0.59
POLR2E-213ENST00000615234 CDK12Q9NYV4 1490 aaPredicted RBP18.75■□□□□ 0.59
POLR2E-213ENST00000615234 VAMP4O75379 141 aa18.74■□□□□ 0.59
POLR2E-213ENST00000615234 TXNDC2Q86VQ3 553 aa18.74■□□□□ 0.59
POLR2E-213ENST00000615234 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
POLR2E-213ENST00000615234 NUDT16Q96DE0 195 aaKnown RBP18.73■□□□□ 0.59
POLR2E-213ENST00000615234 NCKAP5LQ9HCH0 1330 aa18.73■□□□□ 0.59
POLR2E-213ENST00000615234 MRPL50Q8N5N7 158 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms