RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 PLEKHG3A1L390 1219 aa15.96■□□□□ 0.14
CCL3L3-201ENST00000612839 PSME1Q06323 249 aa15.96■□□□□ 0.14
CCL3L3-201ENST00000612839 SPATA31A6Q5VVP1 1343 aa15.95■□□□□ 0.14
CCL3L3-201ENST00000612839 COL22A1Q8NFW1 1626 aaPredicted RBP15.95■□□□□ 0.14
CCL3L3-201ENST00000612839 NGDNQ8NEJ9 315 aaKnown RBP15.95■□□□□ 0.14
CCL3L3-201ENST00000612839 SPATA31A3Q5VYP0 1347 aa15.95■□□□□ 0.14
CCL3L3-201ENST00000612839 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
CCL3L3-201ENST00000612839 LRP6O75581 1613 aa15.94■□□□□ 0.14
CCL3L3-201ENST00000612839 ACEP12821 1306 aa15.94■□□□□ 0.14
CCL3L3-201ENST00000612839 SBNO1A3KN83 1393 aa15.93■□□□□ 0.14
CCL3L3-201ENST00000612839 TNS3Q68CZ2 1445 aa15.93■□□□□ 0.14
CCL3L3-201ENST00000612839 CABP1Q9NZU7 370 aa15.93■□□□□ 0.14
CCL3L3-201ENST00000612839 ATAD2Q6PL18 1390 aa15.93■□□□□ 0.14
CCL3L3-201ENST00000612839 ALS2Q96Q42 1657 aa15.92■□□□□ 0.14
CCL3L3-201ENST00000612839 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
CCL3L3-201ENST00000612839 DISP3Q9P2K9 1392 aa15.91■□□□□ 0.14
CCL3L3-201ENST00000612839 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
CCL3L3-201ENST00000612839 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
CCL3L3-201ENST00000612839 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
CCL3L3-201ENST00000612839 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
CCL3L3-201ENST00000612839 AKAP12Q02952 1782 aa15.9■□□□□ 0.14
CCL3L3-201ENST00000612839 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCL3L3-201ENST00000612839 TMF1P82094 1093 aa15.89■□□□□ 0.13
CCL3L3-201ENST00000612839 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
CCL3L3-201ENST00000612839 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
CCL3L3-201ENST00000612839 USP6P35125 1406 aa15.87■□□□□ 0.13
CCL3L3-201ENST00000612839 CPSF1Q10570 1443 aaKnown RBP15.87■□□□□ 0.13
CCL3L3-201ENST00000612839 ABCA3Q99758 1704 aa15.86■□□□□ 0.13
CCL3L3-201ENST00000612839 CD163L1Q9NR16 1453 aa15.86■□□□□ 0.13
CCL3L3-201ENST00000612839 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
CCL3L3-201ENST00000612839 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
CCL3L3-201ENST00000612839 MON2Q7Z3U7 1717 aa15.86■□□□□ 0.13
CCL3L3-201ENST00000612839 SSH2Q76I76 1423 aa15.86■□□□□ 0.13
CCL3L3-201ENST00000612839 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
CCL3L3-201ENST00000612839 MARF1Q9Y4F3 1742 aaKnown RBP15.85■□□□□ 0.13
CCL3L3-201ENST00000612839 CRYBG1Q9Y4K1 1723 aa15.85■□□□□ 0.13
CCL3L3-201ENST00000612839 NRKQ7Z2Y5 1582 aa15.85■□□□□ 0.13
CCL3L3-201ENST00000612839 ZBTB22O15209 634 aa15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 TMC1Q8TDI8 760 aa15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 BRD4O60885 1362 aaPredicted RBP15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 ADAMTS2O95450 1211 aa15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 RGS17Q9UGC6 210 aaPredicted RBP15.84■□□□□ 0.13
CCL3L3-201ENST00000612839 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
CCL3L3-201ENST00000612839 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
CCL3L3-201ENST00000612839 CDCA8Q53HL2 280 aa15.82■□□□□ 0.12
CCL3L3-201ENST00000612839 MYOM1P52179 1685 aa15.82■□□□□ 0.12
CCL3L3-201ENST00000612839 A0A1W2PP64 1363 aa15.81■□□□□ 0.12
CCL3L3-201ENST00000612839 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
CCL3L3-201ENST00000612839 PIK3C2AO00443 1686 aa15.81■□□□□ 0.12
CCL3L3-201ENST00000612839 ABTB2Q8N961 1025 aa15.81■□□□□ 0.12
CCL3L3-201ENST00000612839 PHRF1Q9P1Y6 1649 aaKnown RBP15.8■□□□□ 0.12
CCL3L3-201ENST00000612839 NUTM2GQ5VZR2 741 aa15.8■□□□□ 0.12
CCL3L3-201ENST00000612839 C8orf37Q96NL8 207 aa15.8■□□□□ 0.12
CCL3L3-201ENST00000612839 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
CCL3L3-201ENST00000612839 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
CCL3L3-201ENST00000612839 HAP1P54257 671 aaPredicted RBP15.78■□□□□ 0.12
CCL3L3-201ENST00000612839 HDGFL2Q7Z4V5 671 aaPredicted RBP15.78■□□□□ 0.12
CCL3L3-201ENST00000612839 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
CCL3L3-201ENST00000612839 ANKRD36BQ8N2N9 1353 aa15.77■□□□□ 0.12
CCL3L3-201ENST00000612839 AFF2P51816 1311 aa15.77■□□□□ 0.12
CCL3L3-201ENST00000612839 TTC21AQ8NDW8 1320 aa15.77■□□□□ 0.12
CCL3L3-201ENST00000612839 NGLY1Q96IV0 654 aa15.77■□□□□ 0.11
CCL3L3-201ENST00000612839 USP19O94966 1318 aa15.76■□□□□ 0.11
CCL3L3-201ENST00000612839 EDC4Q6P2E9 1401 aaKnown RBP15.76■□□□□ 0.11
CCL3L3-201ENST00000612839 NLRP13Q86W25 1043 aa15.76■□□□□ 0.11
CCL3L3-201ENST00000612839 NLRP6P59044 892 aa15.75■□□□□ 0.11
CCL3L3-201ENST00000612839 POTEAQ6S8J7 498 aa15.75■□□□□ 0.11
CCL3L3-201ENST00000612839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCL3L3-201ENST00000612839 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
CCL3L3-201ENST00000612839 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
CCL3L3-201ENST00000612839 SLIT3O75094 1523 aa15.74■□□□□ 0.11
CCL3L3-201ENST00000612839 PLCH1Q4KWH8 1693 aa15.74■□□□□ 0.11
CCL3L3-201ENST00000612839 USP54Q70EL1 1684 aa15.74■□□□□ 0.11
CCL3L3-201ENST00000612839 SLIT2O94813 1529 aa15.73■□□□□ 0.11
CCL3L3-201ENST00000612839 POLR3GLQ9BT43 218 aa15.73■□□□□ 0.11
CCL3L3-201ENST00000612839 BCL9LQ86UU0 1499 aa15.73■□□□□ 0.11
CCL3L3-201ENST00000612839 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
CCL3L3-201ENST00000612839 NME9Q86XW9 330 aa15.72■□□□□ 0.11
CCL3L3-201ENST00000612839 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
CCL3L3-201ENST00000612839 USP31Q70CQ4 1352 aa15.72■□□□□ 0.11
CCL3L3-201ENST00000612839 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.72■□□□□ 0.11
CCL3L3-201ENST00000612839 NWD2Q9ULI1 1742 aa15.72■□□□□ 0.11
CCL3L3-201ENST00000612839 GCP02774 474 aa15.71■□□□□ 0.11
CCL3L3-201ENST00000612839 ILDR2Q71H61 639 aa15.71■□□□□ 0.11
CCL3L3-201ENST00000612839 ZRANB1Q9UGI0 708 aa15.71■□□□□ 0.11
CCL3L3-201ENST00000612839 USP21Q9UK80 565 aa15.71■□□□□ 0.11
CCL3L3-201ENST00000612839 KIAA0232Q92628 1395 aa15.71■□□□□ 0.11
CCL3L3-201ENST00000612839 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.1
CCL3L3-201ENST00000612839 KIF7Q2M1P5 1343 aa15.7■□□□□ 0.1
CCL3L3-201ENST00000612839 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
CCL3L3-201ENST00000612839 CPDO75976 1380 aa15.69■□□□□ 0.1
CCL3L3-201ENST00000612839 NRAPQ86VF7 1730 aa15.69■□□□□ 0.1
CCL3L3-201ENST00000612839 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
CCL3L3-201ENST00000612839 PRDM11Q9NQV5 511 aa15.69■□□□□ 0.1
CCL3L3-201ENST00000612839 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
CCL3L3-201ENST00000612839 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms