RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 MON2Q7Z3U7 1717 aa17.59■□□□□ 0.41
PRKN-210ENST00000612540 NSD3Q9BZ95 1437 aa17.59■□□□□ 0.41
PRKN-210ENST00000612540 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
PRKN-210ENST00000612540 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.41
PRKN-210ENST00000612540 KTN1Q86UP2 1357 aaKnown RBP17.58■□□□□ 0.4
PRKN-210ENST00000612540 ACEP12821 1306 aa17.58■□□□□ 0.4
PRKN-210ENST00000612540 ORAI2Q96SN7 254 aa17.58■□□□□ 0.4
PRKN-210ENST00000612540 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
PRKN-210ENST00000612540 AFF2P51816 1311 aa17.57■□□□□ 0.4
PRKN-210ENST00000612540 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
PRKN-210ENST00000612540 CPSF1Q10570 1443 aaKnown RBP17.55■□□□□ 0.4
PRKN-210ENST00000612540 SOS2Q07890 1332 aaPredicted RBP17.55■□□□□ 0.4
PRKN-210ENST00000612540 RXRBP28702 533 aa17.55■□□□□ 0.4
PRKN-210ENST00000612540 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
PRKN-210ENST00000612540 MARF1Q9Y4F3 1742 aaKnown RBP17.55■□□□□ 0.4
PRKN-210ENST00000612540 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
PRKN-210ENST00000612540 KIF20BQ96Q89 1820 aa17.54■□□□□ 0.4
PRKN-210ENST00000612540 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
PRKN-210ENST00000612540 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
PRKN-210ENST00000612540 USP6P35125 1406 aa17.53■□□□□ 0.4
PRKN-210ENST00000612540 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
PRKN-210ENST00000612540 NRKQ7Z2Y5 1582 aa17.53■□□□□ 0.4
PRKN-210ENST00000612540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.52■□□□□ 0.4
PRKN-210ENST00000612540 C8orf37Q96NL8 207 aa17.52■□□□□ 0.4
PRKN-210ENST00000612540 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
PRKN-210ENST00000612540 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
PRKN-210ENST00000612540 FOXO3O43524 673 aa17.51■□□□□ 0.39
PRKN-210ENST00000612540 PSME1Q06323 249 aa17.51■□□□□ 0.39
PRKN-210ENST00000612540 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRKN-210ENST00000612540 ANP32CO43423 234 aa17.5■□□□□ 0.39
PRKN-210ENST00000612540 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
PRKN-210ENST00000612540 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
PRKN-210ENST00000612540 COL22A1Q8NFW1 1626 aaPredicted RBP17.49■□□□□ 0.39
PRKN-210ENST00000612540 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
PRKN-210ENST00000612540 ANKRD26Q9UPS8 1709 aa17.48■□□□□ 0.39
PRKN-210ENST00000612540 PAK3O75914 559 aaPredicted RBP17.48■□□□□ 0.39
PRKN-210ENST00000612540 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
PRKN-210ENST00000612540 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
PRKN-210ENST00000612540 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
PRKN-210ENST00000612540 RBM6P78332 1123 aaKnown RBP17.47■□□□□ 0.39
PRKN-210ENST00000612540 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
PRKN-210ENST00000612540 PXDNQ92626 1479 aa17.47■□□□□ 0.39
PRKN-210ENST00000612540 RGS12O14924 1447 aa17.47■□□□□ 0.39
PRKN-210ENST00000612540 NSD2O96028 1365 aa17.46■□□□□ 0.39
PRKN-210ENST00000612540 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
PRKN-210ENST00000612540 NME9Q86XW9 330 aa17.46■□□□□ 0.39
PRKN-210ENST00000612540 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.39
PRKN-210ENST00000612540 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
PRKN-210ENST00000612540 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
PRKN-210ENST00000612540 GGNBP2Q9H3C7 697 aa17.45■□□□□ 0.38
PRKN-210ENST00000612540 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
PRKN-210ENST00000612540 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
PRKN-210ENST00000612540 LMOD2Q6P5Q4 547 aa17.44■□□□□ 0.38
PRKN-210ENST00000612540 PIK3C2AO00443 1686 aa17.44■□□□□ 0.38
PRKN-210ENST00000612540 SSH2Q76I76 1423 aa17.44■□□□□ 0.38
PRKN-210ENST00000612540 MORC1Q86VD1 984 aa17.43■□□□□ 0.38
PRKN-210ENST00000612540 FYB1O15117 783 aa17.42■□□□□ 0.38
PRKN-210ENST00000612540 FNBP4Q8N3X1 1017 aaPredicted RBP17.42■□□□□ 0.38
PRKN-210ENST00000612540 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
PRKN-210ENST00000612540 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
PRKN-210ENST00000612540 MIER1Q8N108 512 aa17.41■□□□□ 0.38
PRKN-210ENST00000612540 ABTB2Q8N961 1025 aa17.41■□□□□ 0.38
PRKN-210ENST00000612540 COG3Q96JB2 828 aa17.41■□□□□ 0.38
PRKN-210ENST00000612540 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
PRKN-210ENST00000612540 USP21Q9UK80 565 aa17.41■□□□□ 0.38
PRKN-210ENST00000612540 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
PRKN-210ENST00000612540 ALS2Q96Q42 1657 aa17.4■□□□□ 0.38
PRKN-210ENST00000612540 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
PRKN-210ENST00000612540 RALBP1Q15311 655 aa17.4■□□□□ 0.38
PRKN-210ENST00000612540 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
PRKN-210ENST00000612540 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.38
PRKN-210ENST00000612540 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
PRKN-210ENST00000612540 NLRP6P59044 892 aa17.39■□□□□ 0.37
PRKN-210ENST00000612540 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
PRKN-210ENST00000612540 ATRNO75882 1429 aa17.38■□□□□ 0.37
PRKN-210ENST00000612540 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
PRKN-210ENST00000612540 OVOS2A0A0J9YW53 1432 aa17.38■□□□□ 0.37
PRKN-210ENST00000612540 OVOS2Q6IE36 1432 aa17.38■□□□□ 0.37
PRKN-210ENST00000612540 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
PRKN-210ENST00000612540 SOX12O15370 315 aa17.36■□□□□ 0.37
PRKN-210ENST00000612540 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
PRKN-210ENST00000612540 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
PRKN-210ENST00000612540 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
PRKN-210ENST00000612540 SPATA31A3Q5VYP0 1347 aa17.35■□□□□ 0.37
PRKN-210ENST00000612540 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
PRKN-210ENST00000612540 USP31Q70CQ4 1352 aa17.35■□□□□ 0.37
PRKN-210ENST00000612540 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
PRKN-210ENST00000612540 BRWD3Q6RI45 1802 aa17.35■□□□□ 0.37
PRKN-210ENST00000612540 MAP2P11137 1827 aaKnown RBP17.34■□□□□ 0.37
PRKN-210ENST00000612540 PPP2R1AP30153 589 aa17.32■□□□□ 0.36
PRKN-210ENST00000612540 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
PRKN-210ENST00000612540 EP400Q96L91 3159 aa17.31■□□□□ 0.36
PRKN-210ENST00000612540 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
PRKN-210ENST00000612540 SLIT3O75094 1523 aa17.3■□□□□ 0.36
PRKN-210ENST00000612540 SLIT2O94813 1529 aa17.3■□□□□ 0.36
PRKN-210ENST00000612540 USP19O94966 1318 aa17.29■□□□□ 0.36
PRKN-210ENST00000612540 ZBTB7CA1YPR0 619 aa17.29■□□□□ 0.36
PRKN-210ENST00000612540 FBLN1P23142 703 aa17.29■□□□□ 0.36
PRKN-210ENST00000612540 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
PRKN-210ENST00000612540 CRYBG1Q9Y4K1 1723 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms