RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CANXP27824 592 aaKnown RBP13.48□□□□□ -0.25
PABPC1-224ENST00000610907 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
PABPC1-224ENST00000610907 TECPR2O15040 1411 aa13.47□□□□□ -0.25
PABPC1-224ENST00000610907 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
PABPC1-224ENST00000610907 MAPK8IP3Q9UPT6 1336 aa13.47□□□□□ -0.25
PABPC1-224ENST00000610907 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
PABPC1-224ENST00000610907 MLECQ14165 292 aa13.46□□□□□ -0.25
PABPC1-224ENST00000610907 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.25
PABPC1-224ENST00000610907 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
PABPC1-224ENST00000610907 NRXN3Q9Y4C0 1643 aa13.46□□□□□ -0.25
PABPC1-224ENST00000610907 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.26
PABPC1-224ENST00000610907 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
PABPC1-224ENST00000610907 U2SURPO15042 1029 aaKnown RBP13.45□□□□□ -0.26
PABPC1-224ENST00000610907 FCHSD2O94868 740 aa13.45□□□□□ -0.26
PABPC1-224ENST00000610907 CPSF1Q10570 1443 aaKnown RBP13.45□□□□□ -0.26
PABPC1-224ENST00000610907 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
PABPC1-224ENST00000610907 WAPLQ7Z5K2 1190 aa13.45□□□□□ -0.26
PABPC1-224ENST00000610907 TNRQ92752 1358 aa13.44□□□□□ -0.26
PABPC1-224ENST00000610907 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
PABPC1-224ENST00000610907 PMFBP1Q8TBY8 1022 aa13.44□□□□□ -0.26
PABPC1-224ENST00000610907 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
PABPC1-224ENST00000610907 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
PABPC1-224ENST00000610907 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
PABPC1-224ENST00000610907 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
PABPC1-224ENST00000610907 METP08581 1390 aa13.42□□□□□ -0.26
PABPC1-224ENST00000610907 AATKQ6ZMQ8 1374 aa13.42□□□□□ -0.26
PABPC1-224ENST00000610907 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
PABPC1-224ENST00000610907 CPS1P31327 1500 aa13.42□□□□□ -0.26
PABPC1-224ENST00000610907 NEFMP07197 916 aa13.41□□□□□ -0.26
PABPC1-224ENST00000610907 PANK1Q8TE04 598 aa13.41□□□□□ -0.26
PABPC1-224ENST00000610907 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
PABPC1-224ENST00000610907 POLKQ9UBT6 870 aa13.41□□□□□ -0.26
PABPC1-224ENST00000610907 COG6Q9Y2V7 657 aa13.41□□□□□ -0.26
PABPC1-224ENST00000610907 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
PABPC1-224ENST00000610907 PPIP5K1Q6PFW1 1433 aa13.41□□□□□ -0.26
PABPC1-224ENST00000610907 ZKSCAN2Q63HK3 967 aa13.41□□□□□ -0.26
PABPC1-224ENST00000610907 RIPK4P57078 832 aa13.4□□□□□ -0.26
PABPC1-224ENST00000610907 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
PABPC1-224ENST00000610907 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
PABPC1-224ENST00000610907 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
PABPC1-224ENST00000610907 IGHDP01880 384 aa13.39□□□□□ -0.27
PABPC1-224ENST00000610907 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
PABPC1-224ENST00000610907 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
PABPC1-224ENST00000610907 C8orf34Q49A92 452 aa13.38□□□□□ -0.27
PABPC1-224ENST00000610907 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
PABPC1-224ENST00000610907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.27
PABPC1-224ENST00000610907 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
PABPC1-224ENST00000610907 MVPQ14764 893 aaKnown RBP13.37□□□□□ -0.27
PABPC1-224ENST00000610907 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
PABPC1-224ENST00000610907 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
PABPC1-224ENST00000610907 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
PABPC1-224ENST00000610907 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
PABPC1-224ENST00000610907 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
PABPC1-224ENST00000610907 MON2Q7Z3U7 1717 aa13.37□□□□□ -0.27
PABPC1-224ENST00000610907 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
PABPC1-224ENST00000610907 SKAP1Q86WV1 359 aa13.37□□□□□ -0.27
PABPC1-224ENST00000610907 MAP2P11137 1827 aaKnown RBP13.36□□□□□ -0.27
PABPC1-224ENST00000610907 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
PABPC1-224ENST00000610907 RLBP1P12271 317 aa13.36□□□□□ -0.27
PABPC1-224ENST00000610907 COG3Q96JB2 828 aa13.36□□□□□ -0.27
PABPC1-224ENST00000610907 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
PABPC1-224ENST00000610907 RGS3P49796 1198 aa13.35□□□□□ -0.27
PABPC1-224ENST00000610907 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
PABPC1-224ENST00000610907 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
PABPC1-224ENST00000610907 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
PABPC1-224ENST00000610907 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
PABPC1-224ENST00000610907 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
PABPC1-224ENST00000610907 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
PABPC1-224ENST00000610907 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
PABPC1-224ENST00000610907 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
PABPC1-224ENST00000610907 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
PABPC1-224ENST00000610907 IL13P35225 146 aa13.34□□□□□ -0.27
PABPC1-224ENST00000610907 ATF7IPQ6VMQ6 1270 aa13.34□□□□□ -0.27
PABPC1-224ENST00000610907 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
PABPC1-224ENST00000610907 PLEKHG3A1L390 1219 aa13.33□□□□□ -0.28
PABPC1-224ENST00000610907 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
PABPC1-224ENST00000610907 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
PABPC1-224ENST00000610907 BCL2L13Q9BXK5 485 aa13.33□□□□□ -0.28
PABPC1-224ENST00000610907 PCDHB15Q9Y5E8 787 aa13.33□□□□□ -0.28
PABPC1-224ENST00000610907 ITSN1Q15811 1721 aa13.33□□□□□ -0.28
PABPC1-224ENST00000610907 C3P01024 1663 aa13.33□□□□□ -0.28
PABPC1-224ENST00000610907 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-224ENST00000610907 NME9Q86XW9 330 aa13.32□□□□□ -0.28
PABPC1-224ENST00000610907 EID1Q9Y6B2 187 aa13.32□□□□□ -0.28
PABPC1-224ENST00000610907 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
PABPC1-224ENST00000610907 TRIM27P14373 513 aa13.31□□□□□ -0.28
PABPC1-224ENST00000610907 GNAI1P63096 354 aa13.31□□□□□ -0.28
PABPC1-224ENST00000610907 HDAC1Q13547 482 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-224ENST00000610907 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
PABPC1-224ENST00000610907 IFT57Q9NWB7 429 aa13.31□□□□□ -0.28
PABPC1-224ENST00000610907 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
PABPC1-224ENST00000610907 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
PABPC1-224ENST00000610907 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
PABPC1-224ENST00000610907 ARHGAP45Q92619 1136 aa13.3□□□□□ -0.28
PABPC1-224ENST00000610907 TNNQ9UQP3 1299 aa13.3□□□□□ -0.28
PABPC1-224ENST00000610907 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
PABPC1-224ENST00000610907 SLIT1O75093 1534 aa13.3□□□□□ -0.28
PABPC1-224ENST00000610907 PRR36Q9H6K5 1346 aa13.3□□□□□ -0.28
PABPC1-224ENST00000610907 ARHGAP23Q9P227 1491 aa13.3□□□□□ -0.28
PABPC1-224ENST00000610907 DAXXQ9UER7 740 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms