RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 FANCAO15360 1455 aa15.74■□□□□ 0.11
MSH6-212ENST00000607272 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
MSH6-212ENST00000607272 MROH1Q8NDA8 1641 aa15.73■□□□□ 0.11
MSH6-212ENST00000607272 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
MSH6-212ENST00000607272 GZF1Q9H116 711 aaPredicted RBP15.72■□□□□ 0.11
MSH6-212ENST00000607272 TRIM27P14373 513 aa15.72■□□□□ 0.11
MSH6-212ENST00000607272 CLCN1P35523 988 aa15.72■□□□□ 0.11
MSH6-212ENST00000607272 ADGRB3O60242 1522 aa15.71■□□□□ 0.11
MSH6-212ENST00000607272 ATF7IPQ6VMQ6 1270 aa15.71■□□□□ 0.11
MSH6-212ENST00000607272 ADGRB2O60241 1585 aa15.71■□□□□ 0.11
MSH6-212ENST00000607272 ANKRD36BQ8N2N9 1353 aa15.71■□□□□ 0.1
MSH6-212ENST00000607272 ITPRIPQ8IWB1 547 aa15.71■□□□□ 0.1
MSH6-212ENST00000607272 LMTK2Q8IWU2 1503 aa15.7■□□□□ 0.1
MSH6-212ENST00000607272 QRICH2Q9H0J4 1663 aa15.7■□□□□ 0.1
MSH6-212ENST00000607272 EVC2Q86UK5 1308 aa15.7■□□□□ 0.1
MSH6-212ENST00000607272 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
MSH6-212ENST00000607272 ZC3H13Q5T200 1668 aaKnown RBP15.7■□□□□ 0.1
MSH6-212ENST00000607272 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
MSH6-212ENST00000607272 EXOSC9Q06265 439 aaKnown RBP15.7■□□□□ 0.1
MSH6-212ENST00000607272 TSR2Q969E8 191 aaKnown RBP15.7■□□□□ 0.1
MSH6-212ENST00000607272 SNX21Q969T3 373 aa15.7■□□□□ 0.1
MSH6-212ENST00000607272 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
MSH6-212ENST00000607272 IL16Q14005 1332 aa15.69■□□□□ 0.1
MSH6-212ENST00000607272 RPGRIP1LQ68CZ1 1315 aa15.69■□□□□ 0.1
MSH6-212ENST00000607272 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
MSH6-212ENST00000607272 SSH1Q8WYL5 1049 aa15.69■□□□□ 0.1
MSH6-212ENST00000607272 PANK2Q9BZ23 570 aa15.69■□□□□ 0.1
MSH6-212ENST00000607272 ADGRB1O14514 1584 aa15.69■□□□□ 0.1
MSH6-212ENST00000607272 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
MSH6-212ENST00000607272 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
MSH6-212ENST00000607272 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
MSH6-212ENST00000607272 DDIT3P35638 169 aa15.68■□□□□ 0.1
MSH6-212ENST00000607272 TMPOP42166 694 aaKnown RBP15.68■□□□□ 0.1
MSH6-212ENST00000607272 ZBTB40Q9NUA8 1239 aa15.68■□□□□ 0.1
MSH6-212ENST00000607272 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
MSH6-212ENST00000607272 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
MSH6-212ENST00000607272 ABCC11Q96J66 1382 aa15.68■□□□□ 0.1
MSH6-212ENST00000607272 PLEKHF1Q96S99 279 aa15.67■□□□□ 0.1
MSH6-212ENST00000607272 PPRC1Q5VV67 1664 aaKnown RBP15.67■□□□□ 0.1
MSH6-212ENST00000607272 GRPEL1Q9HAV7 217 aa15.67■□□□□ 0.1
MSH6-212ENST00000607272 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
MSH6-212ENST00000607272 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
MSH6-212ENST00000607272 NUCB1Q02818 461 aa15.66■□□□□ 0.1
MSH6-212ENST00000607272 TMEM132EQ6IEE7 984 aa15.66■□□□□ 0.1
MSH6-212ENST00000607272 HOMEZQ8IX15 550 aa15.66■□□□□ 0.1
MSH6-212ENST00000607272 PTMSP20962 102 aa15.66■□□□□ 0.1
MSH6-212ENST00000607272 PROM2Q8N271 834 aa15.66■□□□□ 0.1
MSH6-212ENST00000607272 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
MSH6-212ENST00000607272 TMEM57Q8N5G2 664 aa15.64■□□□□ 0.09
MSH6-212ENST00000607272 GBP4Q96PP9 640 aa15.64■□□□□ 0.09
MSH6-212ENST00000607272 TMEM132AQ24JP5 1023 aa15.64■□□□□ 0.09
MSH6-212ENST00000607272 SKOR2Q2VWA4 1001 aaPredicted RBP15.64■□□□□ 0.09
MSH6-212ENST00000607272 CD109Q6YHK3 1445 aa15.64■□□□□ 0.09
MSH6-212ENST00000607272 PPLO60437 1756 aa15.63■□□□□ 0.09
MSH6-212ENST00000607272 U2SURPO15042 1029 aaKnown RBP15.63■□□□□ 0.09
MSH6-212ENST00000607272 NAP1L5Q96NT1 182 aaPredicted RBP15.63■□□□□ 0.09
MSH6-212ENST00000607272 ALDH1L2Q3SY69 923 aa15.63■□□□□ 0.09
MSH6-212ENST00000607272 BMP2KLQ5H9B9 411 aa15.62■□□□□ 0.09
MSH6-212ENST00000607272 CHD1LQ86WJ1 897 aa15.62■□□□□ 0.09
MSH6-212ENST00000607272 HSP90AB1P08238 724 aaKnown RBP15.62■□□□□ 0.09
MSH6-212ENST00000607272 TNPO1Q92973 898 aaKnown RBP15.62■□□□□ 0.09
MSH6-212ENST00000607272 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
MSH6-212ENST00000607272 CHMP4BQ9H444 224 aaKnown RBP15.61■□□□□ 0.09
MSH6-212ENST00000607272 NPATQ14207 1427 aa15.61■□□□□ 0.09
MSH6-212ENST00000607272 RIPK4P57078 832 aa15.6■□□□□ 0.09
MSH6-212ENST00000607272 RAB3GAP1Q15042 981 aa15.6■□□□□ 0.09
MSH6-212ENST00000607272 TULP4Q9NRJ4 1543 aa15.6■□□□□ 0.09
MSH6-212ENST00000607272 ESPNB1AK53 854 aa15.6■□□□□ 0.09
MSH6-212ENST00000607272 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
MSH6-212ENST00000607272 LNPKQ9C0E8 428 aa15.6■□□□□ 0.09
MSH6-212ENST00000607272 BRPF1P55201 1214 aaPredicted RBP15.59■□□□□ 0.09
MSH6-212ENST00000607272 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
MSH6-212ENST00000607272 GLIPR1L2Q4G1C9 344 aa15.59■□□□□ 0.09
MSH6-212ENST00000607272 GCC1Q96CN9 775 aa15.59■□□□□ 0.09
MSH6-212ENST00000607272 TRIM44Q96DX7 344 aaPredicted RBP15.58■□□□□ 0.08
MSH6-212ENST00000607272 KIDINS220Q9ULH0 1771 aa15.58■□□□□ 0.08
MSH6-212ENST00000607272 COL3A1P02461 1466 aaPredicted RBP15.58■□□□□ 0.08
MSH6-212ENST00000607272 GLI2P10070 1586 aa15.58■□□□□ 0.08
MSH6-212ENST00000607272 HSP90AA1P07900 732 aaKnown RBP15.57■□□□□ 0.08
MSH6-212ENST00000607272 A0A1W2PP64 1363 aa15.57■□□□□ 0.08
MSH6-212ENST00000607272 ECM2O94769 699 aaPredicted RBP15.56■□□□□ 0.08
MSH6-212ENST00000607272 GGNBP2Q9H3C7 697 aa15.56■□□□□ 0.08
MSH6-212ENST00000607272 MED14O60244 1454 aa15.56■□□□□ 0.08
MSH6-212ENST00000607272 DIAPH1O60610 1272 aaKnown RBP15.56■□□□□ 0.08
MSH6-212ENST00000607272 KIF2CQ99661 725 aa15.56■□□□□ 0.08
MSH6-212ENST00000607272 TERF2IPQ9NYB0 399 aa15.56■□□□□ 0.08
MSH6-212ENST00000607272 K7ELQ4 463 aaPredicted RBP15.55■□□□□ 0.08
MSH6-212ENST00000607272 RRP9O43818 475 aaKnown RBP15.55■□□□□ 0.08
MSH6-212ENST00000607272 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
MSH6-212ENST00000607272 ARHGAP45Q92619 1136 aa15.55■□□□□ 0.08
MSH6-212ENST00000607272 ARHGEF28Q8N1W1 1705 aaKnown RBP15.54■□□□□ 0.08
MSH6-212ENST00000607272 GOLGA6L22H0YM25 854 aa15.54■□□□□ 0.08
MSH6-212ENST00000607272 FYB1O15117 783 aa15.54■□□□□ 0.08
MSH6-212ENST00000607272 FCHSD2O94868 740 aa15.54■□□□□ 0.08
MSH6-212ENST00000607272 PNPLA6Q8IY17 1366 aa15.54■□□□□ 0.08
MSH6-212ENST00000607272 ZBTB7BO15156 539 aaPredicted RBP15.53■□□□□ 0.08
MSH6-212ENST00000607272 SRPK2P78362 688 aaKnown RBP15.53■□□□□ 0.08
MSH6-212ENST00000607272 GGT6Q6P531 493 aa15.53■□□□□ 0.08
MSH6-212ENST00000607272 CLEC17AQ6ZS10 378 aa15.53■□□□□ 0.08
MSH6-212ENST00000607272 GAS2L3Q86XJ1 694 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms