RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 TRPM3Q9HCF6 1732 aaPredicted RBP14.26□□□□□ -0.13
CTSA-215ENST00000607187 MARF1Q9Y4F3 1742 aaKnown RBP14.26□□□□□ -0.13
CTSA-215ENST00000607187 PSME1Q06323 249 aa14.25□□□□□ -0.13
CTSA-215ENST00000607187 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
CTSA-215ENST00000607187 TOPAZ1Q8N9V7 1692 aa14.25□□□□□ -0.13
CTSA-215ENST00000607187 SBNO1A3KN83 1393 aa14.24□□□□□ -0.13
CTSA-215ENST00000607187 ZNF772Q68DY9 489 aaPredicted RBP14.24□□□□□ -0.13
CTSA-215ENST00000607187 RALGAPBQ86X10 1494 aa14.24□□□□□ -0.13
CTSA-215ENST00000607187 TNS3Q68CZ2 1445 aa14.24□□□□□ -0.13
CTSA-215ENST00000607187 ADAMTS2O95450 1211 aa14.23□□□□□ -0.13
CTSA-215ENST00000607187 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
CTSA-215ENST00000607187 C8orf37Q96NL8 207 aa14.22□□□□□ -0.13
CTSA-215ENST00000607187 CCDC61Q9Y6R9 512 aa14.22□□□□□ -0.13
CTSA-215ENST00000607187 ALS2Q96Q42 1657 aa14.22□□□□□ -0.13
CTSA-215ENST00000607187 AFF2P51816 1311 aa14.21□□□□□ -0.13
CTSA-215ENST00000607187 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
CTSA-215ENST00000607187 ABCA3Q99758 1704 aa14.21□□□□□ -0.14
CTSA-215ENST00000607187 ARHGEF10O15013 1369 aa14.21□□□□□ -0.14
CTSA-215ENST00000607187 CARD11Q9BXL7 1154 aa14.2□□□□□ -0.14
CTSA-215ENST00000607187 POLR3AO14802 1390 aaPredicted RBP14.2□□□□□ -0.14
CTSA-215ENST00000607187 PLEKHG3A1L390 1219 aa14.19□□□□□ -0.14
CTSA-215ENST00000607187 SRPK2P78362 688 aaKnown RBP14.19□□□□□ -0.14
CTSA-215ENST00000607187 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
CTSA-215ENST00000607187 CABP2Q9NPB3 220 aa14.19□□□□□ -0.14
CTSA-215ENST00000607187 FNBP4Q8N3X1 1017 aaPredicted RBP14.18□□□□□ -0.14
CTSA-215ENST00000607187 ACEP12821 1306 aa14.17□□□□□ -0.14
CTSA-215ENST00000607187 EVC2Q86UK5 1308 aa14.17□□□□□ -0.14
CTSA-215ENST00000607187 LMOD2Q6P5Q4 547 aa14.17□□□□□ -0.14
CTSA-215ENST00000607187 SBNO2Q9Y2G9 1366 aa14.17□□□□□ -0.14
CTSA-215ENST00000607187 PPIP5K1Q6PFW1 1433 aa14.16□□□□□ -0.14
CTSA-215ENST00000607187 CRYBG1Q9Y4K1 1723 aa14.16□□□□□ -0.14
CTSA-215ENST00000607187 CABLES1Q8TDN4 633 aa14.16□□□□□ -0.14
CTSA-215ENST00000607187 TIMELESSQ9UNS1 1208 aa14.16□□□□□ -0.14
CTSA-215ENST00000607187 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.14
CTSA-215ENST00000607187 USP21Q9UK80 565 aa14.15□□□□□ -0.14
CTSA-215ENST00000607187 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
CTSA-215ENST00000607187 RXRBP28702 533 aa14.14□□□□□ -0.15
CTSA-215ENST00000607187 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.14□□□□□ -0.15
CTSA-215ENST00000607187 BCL9LQ86UU0 1499 aa14.13□□□□□ -0.15
CTSA-215ENST00000607187 CABP1Q9NZU7 370 aa14.13□□□□□ -0.15
CTSA-215ENST00000607187 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.13□□□□□ -0.15
CTSA-215ENST00000607187 SLIT2O94813 1529 aa14.13□□□□□ -0.15
CTSA-215ENST00000607187 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
CTSA-215ENST00000607187 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
CTSA-215ENST00000607187 AKAP12Q02952 1782 aa14.12□□□□□ -0.15
CTSA-215ENST00000607187 RBM6P78332 1123 aaKnown RBP14.12□□□□□ -0.15
CTSA-215ENST00000607187 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
CTSA-215ENST00000607187 ATRNO75882 1429 aa14.12□□□□□ -0.15
CTSA-215ENST00000607187 PLCH1Q4KWH8 1693 aa14.11□□□□□ -0.15
CTSA-215ENST00000607187 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
CTSA-215ENST00000607187 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
CTSA-215ENST00000607187 TRPC5Q9UL62 973 aaPredicted RBP14.11□□□□□ -0.15
CTSA-215ENST00000607187 BRD4O60885 1362 aaPredicted RBP14.1□□□□□ -0.15
CTSA-215ENST00000607187 ATAD2Q6PL18 1390 aa14.1□□□□□ -0.15
CTSA-215ENST00000607187 POLA2Q14181 598 aa14.1□□□□□ -0.15
CTSA-215ENST00000607187 PHRF1Q9P1Y6 1649 aaKnown RBP14.1□□□□□ -0.15
CTSA-215ENST00000607187 USP6P35125 1406 aa14.09□□□□□ -0.15
CTSA-215ENST00000607187 UNC5CLQ8IV45 518 aa14.09□□□□□ -0.15
CTSA-215ENST00000607187 COL14A1Q05707 1796 aaKnown RBP14.09□□□□□ -0.15
CTSA-215ENST00000607187 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
CTSA-215ENST00000607187 FAM83GA6ND36 823 aa14.08□□□□□ -0.16
CTSA-215ENST00000607187 ABTB2Q8N961 1025 aa14.08□□□□□ -0.16
CTSA-215ENST00000607187 TESK2Q96S53 571 aa14.08□□□□□ -0.16
CTSA-215ENST00000607187 EP400Q96L91 3159 aa14.08□□□□□ -0.16
CTSA-215ENST00000607187 SSH2Q76I76 1423 aa14.07□□□□□ -0.16
CTSA-215ENST00000607187 NRAPQ86VF7 1730 aa14.07□□□□□ -0.16
CTSA-215ENST00000607187 NUTM2GQ5VZR2 741 aa14.07□□□□□ -0.16
CTSA-215ENST00000607187 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
CTSA-215ENST00000607187 USP47Q96K76 1375 aa14.07□□□□□ -0.16
CTSA-215ENST00000607187 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
CTSA-215ENST00000607187 RGS12O14924 1447 aa14.07□□□□□ -0.16
CTSA-215ENST00000607187 CPSF1Q10570 1443 aaKnown RBP14.07□□□□□ -0.16
CTSA-215ENST00000607187 SPOCK2Q92563 424 aa14.06□□□□□ -0.16
CTSA-215ENST00000607187 PUS7Q96PZ0 661 aaKnown RBP14.06□□□□□ -0.16
CTSA-215ENST00000607187 NRKQ7Z2Y5 1582 aa14.05□□□□□ -0.16
CTSA-215ENST00000607187 PIK3C2AO00443 1686 aa14.05□□□□□ -0.16
CTSA-215ENST00000607187 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
CTSA-215ENST00000607187 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
CTSA-215ENST00000607187 PAXIP1Q6ZW49 1069 aaPredicted RBP14.05□□□□□ -0.16
CTSA-215ENST00000607187 GJD4Q96KN9 370 aaPredicted RBP14.05□□□□□ -0.16
CTSA-215ENST00000607187 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
CTSA-215ENST00000607187 USP19O94966 1318 aa14.05□□□□□ -0.16
CTSA-215ENST00000607187 GLI3P10071 1580 aa14.05□□□□□ -0.16
CTSA-215ENST00000607187 NLRP13Q86W25 1043 aa14.04□□□□□ -0.16
CTSA-215ENST00000607187 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
CTSA-215ENST00000607187 CD163L1Q9NR16 1453 aa14.04□□□□□ -0.16
CTSA-215ENST00000607187 VPS72Q15906 364 aa14.03□□□□□ -0.16
CTSA-215ENST00000607187 PRDM11Q9NQV5 511 aa14.03□□□□□ -0.16
CTSA-215ENST00000607187 BTG4Q9NY30 223 aa14.03□□□□□ -0.16
CTSA-215ENST00000607187 KIAA0232Q92628 1395 aa14.03□□□□□ -0.16
CTSA-215ENST00000607187 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
CTSA-215ENST00000607187 TTC21BQ7Z4L5 1316 aa14.02□□□□□ -0.17
CTSA-215ENST00000607187 CFAP44Q96MT7 982 aa14.02□□□□□ -0.17
CTSA-215ENST00000607187 SLIT3O75094 1523 aa14.01□□□□□ -0.17
CTSA-215ENST00000607187 CPDO75976 1380 aa14.01□□□□□ -0.17
CTSA-215ENST00000607187 TTC21AQ8NDW8 1320 aa14.01□□□□□ -0.17
CTSA-215ENST00000607187 GCP02774 474 aa14.01□□□□□ -0.17
CTSA-215ENST00000607187 NLRP6P59044 892 aa14.01□□□□□ -0.17
CTSA-215ENST00000607187 ZC3H6P61129 1189 aaKnown RBP14.01□□□□□ -0.17
CTSA-215ENST00000607187 TMC1Q8TDI8 760 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms