RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 YTHDC2Q9H6S0 1430 aaKnown RBP19.59■□□□□ 0.73
ZNF541-205ENST00000595558 VIRMAQ69YN4 1812 aaKnown RBP19.58■□□□□ 0.72
ZNF541-205ENST00000595558 WDR63Q8IWG1 891 aa19.57■□□□□ 0.72
ZNF541-205ENST00000595558 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
ZNF541-205ENST00000595558 TMEM131LA2VDJ0 1609 aa19.57■□□□□ 0.72
ZNF541-205ENST00000595558 PTPRMP28827 1452 aa19.57■□□□□ 0.72
ZNF541-205ENST00000595558 PMFBP1Q8TBY8 1022 aa19.56■□□□□ 0.72
ZNF541-205ENST00000595558 PREX1Q8TCU6 1659 aa19.55■□□□□ 0.72
ZNF541-205ENST00000595558 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
ZNF541-205ENST00000595558 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
ZNF541-205ENST00000595558 HMOX1P09601 288 aa19.52■□□□□ 0.72
ZNF541-205ENST00000595558 TBC1D32Q96NH3 1257 aa19.52■□□□□ 0.72
ZNF541-205ENST00000595558 ANTXR1Q9H6X2 564 aa19.52■□□□□ 0.72
ZNF541-205ENST00000595558 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
ZNF541-205ENST00000595558 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
ZNF541-205ENST00000595558 BECN1Q14457 450 aa19.52■□□□□ 0.71
ZNF541-205ENST00000595558 TBC1D2Q9BYX2 928 aa19.52■□□□□ 0.71
ZNF541-205ENST00000595558 MVPQ14764 893 aaKnown RBP19.51■□□□□ 0.71
ZNF541-205ENST00000595558 CCDC27Q2M243 656 aa19.51■□□□□ 0.71
ZNF541-205ENST00000595558 THUMPD2Q9BTF0 503 aaKnown RBP19.51■□□□□ 0.71
ZNF541-205ENST00000595558 METP08581 1390 aa19.51■□□□□ 0.71
ZNF541-205ENST00000595558 DIP2BQ9P265 1576 aa19.51■□□□□ 0.71
ZNF541-205ENST00000595558 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
ZNF541-205ENST00000595558 ABCC11Q96J66 1382 aa19.5■□□□□ 0.71
ZNF541-205ENST00000595558 NME9Q86XW9 330 aa19.5■□□□□ 0.71
ZNF541-205ENST00000595558 RWDD1Q9H446 243 aaPredicted RBP19.5■□□□□ 0.71
ZNF541-205ENST00000595558 ALKQ9UM73 1620 aa19.5■□□□□ 0.71
ZNF541-205ENST00000595558 PLEKHF1Q96S99 279 aa19.5■□□□□ 0.71
ZNF541-205ENST00000595558 TRIM35Q9UPQ4 493 aa19.5■□□□□ 0.71
ZNF541-205ENST00000595558 EMILIN1Q9Y6C2 1016 aa19.5■□□□□ 0.71
ZNF541-205ENST00000595558 EXOSC9Q06265 439 aaKnown RBP19.49■□□□□ 0.71
ZNF541-205ENST00000595558 ESF1Q9H501 851 aaKnown RBP19.49■□□□□ 0.71
ZNF541-205ENST00000595558 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
ZNF541-205ENST00000595558 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
ZNF541-205ENST00000595558 FTSJ3Q8IY81 847 aaKnown RBP19.48■□□□□ 0.71
ZNF541-205ENST00000595558 ZKSCAN2Q63HK3 967 aa19.48■□□□□ 0.71
ZNF541-205ENST00000595558 HDGFL2Q7Z4V5 671 aaPredicted RBP19.48■□□□□ 0.71
ZNF541-205ENST00000595558 DZIP1LQ8IYY4 767 aaKnown RBP19.48■□□□□ 0.71
ZNF541-205ENST00000595558 CLTCQ00610 1675 aaKnown RBP19.48■□□□□ 0.71
ZNF541-205ENST00000595558 ZFYVE9O95405 1425 aa19.47■□□□□ 0.71
ZNF541-205ENST00000595558 RIMS2Q9UQ26 1411 aa19.47■□□□□ 0.71
ZNF541-205ENST00000595558 A2ML1A8K2U0 1454 aa19.47■□□□□ 0.71
ZNF541-205ENST00000595558 SOX12O15370 315 aa19.47■□□□□ 0.71
ZNF541-205ENST00000595558 RIPK4P57078 832 aa19.47■□□□□ 0.71
ZNF541-205ENST00000595558 RRS1Q15050 365 aaKnown RBP19.47■□□□□ 0.71
ZNF541-205ENST00000595558 TRIM27P14373 513 aa19.46■□□□□ 0.71
ZNF541-205ENST00000595558 PHACTR3Q96KR7 559 aa19.46■□□□□ 0.71
ZNF541-205ENST00000595558 UPF2Q9HAU5 1272 aaKnown RBP19.46■□□□□ 0.71
ZNF541-205ENST00000595558 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
ZNF541-205ENST00000595558 SSH1Q8WYL5 1049 aa19.46■□□□□ 0.71
ZNF541-205ENST00000595558 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
ZNF541-205ENST00000595558 DIAPH1O60610 1272 aaKnown RBP19.45■□□□□ 0.7
ZNF541-205ENST00000595558 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
ZNF541-205ENST00000595558 ARXQ96QS3 562 aa19.44■□□□□ 0.7
ZNF541-205ENST00000595558 AAMPQ13685 434 aa19.44■□□□□ 0.7
ZNF541-205ENST00000595558 ATAD2Q6PL18 1390 aa19.43■□□□□ 0.7
ZNF541-205ENST00000595558 ELL2O00472 640 aaPredicted RBP19.43■□□□□ 0.7
ZNF541-205ENST00000595558 MFAP1P55081 439 aaKnown RBP19.43■□□□□ 0.7
ZNF541-205ENST00000595558 ITPRIPQ8IWB1 547 aa19.43■□□□□ 0.7
ZNF541-205ENST00000595558 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
ZNF541-205ENST00000595558 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
ZNF541-205ENST00000595558 ARHGEF40Q8TER5 1519 aa19.43■□□□□ 0.7
ZNF541-205ENST00000595558 NSD2O96028 1365 aa19.43■□□□□ 0.7
ZNF541-205ENST00000595558 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
ZNF541-205ENST00000595558 PRKAR2BP31323 418 aa19.42■□□□□ 0.7
ZNF541-205ENST00000595558 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
ZNF541-205ENST00000595558 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
ZNF541-205ENST00000595558 NUDT16Q96DE0 195 aaKnown RBP19.4■□□□□ 0.7
ZNF541-205ENST00000595558 LTKP29376 864 aa19.39■□□□□ 0.7
ZNF541-205ENST00000595558 TMEM57Q8N5G2 664 aa19.39■□□□□ 0.7
ZNF541-205ENST00000595558 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
ZNF541-205ENST00000595558 COL3A1P02461 1466 aaPredicted RBP19.38■□□□□ 0.69
ZNF541-205ENST00000595558 ATF7IPQ6VMQ6 1270 aa19.38■□□□□ 0.69
ZNF541-205ENST00000595558 FAM83GA6ND36 823 aa19.37■□□□□ 0.69
ZNF541-205ENST00000595558 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
ZNF541-205ENST00000595558 GZF1Q9H116 711 aaPredicted RBP19.37■□□□□ 0.69
ZNF541-205ENST00000595558 PRR36Q9H6K5 1346 aa19.36■□□□□ 0.69
ZNF541-205ENST00000595558 NCBP3Q53F19 620 aaKnown RBP19.36■□□□□ 0.69
ZNF541-205ENST00000595558 PPIP5K1Q6PFW1 1433 aa19.35■□□□□ 0.69
ZNF541-205ENST00000595558 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
ZNF541-205ENST00000595558 DDX19BQ9UMR2 479 aa19.35■□□□□ 0.69
ZNF541-205ENST00000595558 TSPYL6Q8N831 410 aa19.34■□□□□ 0.69
ZNF541-205ENST00000595558 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
ZNF541-205ENST00000595558 ZBTB40Q9NUA8 1239 aa19.33■□□□□ 0.69
ZNF541-205ENST00000595558 SMC5Q8IY18 1101 aa19.33■□□□□ 0.68
ZNF541-205ENST00000595558 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
ZNF541-205ENST00000595558 MCM4P33991 863 aa19.32■□□□□ 0.68
ZNF541-205ENST00000595558 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
ZNF541-205ENST00000595558 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
ZNF541-205ENST00000595558 RBM33Q96EV2 1170 aaKnown RBP19.32■□□□□ 0.68
ZNF541-205ENST00000595558 LNPKQ9C0E8 428 aa19.32■□□□□ 0.68
ZNF541-205ENST00000595558 FAM43AQ8N2R8 423 aa19.31■□□□□ 0.68
ZNF541-205ENST00000595558 CCDC61Q9Y6R9 512 aa19.3■□□□□ 0.68
ZNF541-205ENST00000595558 RRAGDQ9NQL2 400 aaPredicted RBP19.3■□□□□ 0.68
ZNF541-205ENST00000595558 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
ZNF541-205ENST00000595558 SPATA31D1Q6ZQQ2 1576 aa19.29■□□□□ 0.68
ZNF541-205ENST00000595558 CPS1P31327 1500 aa19.29■□□□□ 0.68
ZNF541-205ENST00000595558 XRCC6P12956 609 aaKnown RBP eCLIP19.28■□□□□ 0.68
ZNF541-205ENST00000595558 IL13P35225 146 aa19.28■□□□□ 0.68
ZNF541-205ENST00000595558 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 446.5 ms