RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 AHDC1Q5TGY3 1603 aaPredicted RBP14.88□□□□□ -0.03
USE1-204ENST00000594399 SSH2Q76I76 1423 aa14.87□□□□□ -0.03
USE1-204ENST00000594399 FOXO3O43524 673 aa14.87□□□□□ -0.03
USE1-204ENST00000594399 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
USE1-204ENST00000594399 PHLPP1O60346 1717 aa14.86□□□□□ -0.03
USE1-204ENST00000594399 CGNL1Q0VF96 1302 aa14.86□□□□□ -0.03
USE1-204ENST00000594399 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
USE1-204ENST00000594399 PIK3C2AO00443 1686 aa14.85□□□□□ -0.03
USE1-204ENST00000594399 SOCS7O14512 581 aa14.85□□□□□ -0.03
USE1-204ENST00000594399 PER1O15534 1290 aaPredicted RBP14.85□□□□□ -0.03
USE1-204ENST00000594399 PSME1Q06323 249 aa14.85□□□□□ -0.03
USE1-204ENST00000594399 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
USE1-204ENST00000594399 NSD2O96028 1365 aa14.85□□□□□ -0.03
USE1-204ENST00000594399 JCADQ9P266 1359 aa14.85□□□□□ -0.03
USE1-204ENST00000594399 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
USE1-204ENST00000594399 NPC1L1Q9UHC9 1359 aa14.84□□□□□ -0.03
USE1-204ENST00000594399 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
USE1-204ENST00000594399 ALS2Q96Q42 1657 aa14.84□□□□□ -0.03
USE1-204ENST00000594399 XPCQ01831 940 aaPredicted RBP14.83□□□□□ -0.04
USE1-204ENST00000594399 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.04
USE1-204ENST00000594399 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.04
USE1-204ENST00000594399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.83□□□□□ -0.04
USE1-204ENST00000594399 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
USE1-204ENST00000594399 TNS3Q68CZ2 1445 aa14.83□□□□□ -0.04
USE1-204ENST00000594399 AMER1Q5JTC6 1135 aaPredicted RBP14.82□□□□□ -0.04
USE1-204ENST00000594399 DDX17Q92841 729 aaKnown RBP14.82□□□□□ -0.04
USE1-204ENST00000594399 SOS2Q07890 1332 aaPredicted RBP14.82□□□□□ -0.04
USE1-204ENST00000594399 COL16A1Q07092 1604 aaPredicted RBP14.81□□□□□ -0.04
USE1-204ENST00000594399 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
USE1-204ENST00000594399 NME9Q86XW9 330 aa14.8□□□□□ -0.04
USE1-204ENST00000594399 OVOS2A0A0J9YW53 1432 aa14.8□□□□□ -0.04
USE1-204ENST00000594399 OVOS2Q6IE36 1432 aa14.8□□□□□ -0.04
USE1-204ENST00000594399 SPATA31A6Q5VVP1 1343 aa14.79□□□□□ -0.04
USE1-204ENST00000594399 MARF1Q9Y4F3 1742 aaKnown RBP14.79□□□□□ -0.04
USE1-204ENST00000594399 ARHGEF10O15013 1369 aa14.78□□□□□ -0.04
USE1-204ENST00000594399 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
USE1-204ENST00000594399 FYB1O15117 783 aa14.78□□□□□ -0.04
USE1-204ENST00000594399 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
USE1-204ENST00000594399 PARD3Q8TEW0 1356 aa14.77□□□□□ -0.04
USE1-204ENST00000594399 SPATA31A3Q5VYP0 1347 aa14.77□□□□□ -0.04
USE1-204ENST00000594399 CNGB1Q14028 1251 aaPredicted RBP14.77□□□□□ -0.05
USE1-204ENST00000594399 ABTB2Q8N961 1025 aa14.77□□□□□ -0.05
USE1-204ENST00000594399 LRRC59Q96AG4 307 aaKnown RBP14.77□□□□□ -0.05
USE1-204ENST00000594399 GGNBP2Q9H3C7 697 aa14.77□□□□□ -0.05
USE1-204ENST00000594399 CRYBG1Q9Y4K1 1723 aa14.76□□□□□ -0.05
USE1-204ENST00000594399 ANP32CO43423 234 aa14.76□□□□□ -0.05
USE1-204ENST00000594399 COG3Q96JB2 828 aa14.76□□□□□ -0.05
USE1-204ENST00000594399 PHRF1Q9P1Y6 1649 aaKnown RBP14.76□□□□□ -0.05
USE1-204ENST00000594399 COL22A1Q8NFW1 1626 aaPredicted RBP14.75□□□□□ -0.05
USE1-204ENST00000594399 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
USE1-204ENST00000594399 SLIT3O75094 1523 aa14.75□□□□□ -0.05
USE1-204ENST00000594399 ABCA3Q99758 1704 aa14.75□□□□□ -0.05
USE1-204ENST00000594399 NLRP6P59044 892 aa14.74□□□□□ -0.05
USE1-204ENST00000594399 RALBP1Q15311 655 aa14.74□□□□□ -0.05
USE1-204ENST00000594399 MEX3CQ5U5Q3 659 aaKnown RBP14.74□□□□□ -0.05
USE1-204ENST00000594399 MORC1Q86VD1 984 aa14.74□□□□□ -0.05
USE1-204ENST00000594399 PRKRIP1Q9H875 184 aaPredicted RBP14.74□□□□□ -0.05
USE1-204ENST00000594399 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
USE1-204ENST00000594399 SHPRHQ149N8 1683 aa14.74□□□□□ -0.05
USE1-204ENST00000594399 USP19O94966 1318 aa14.73□□□□□ -0.05
USE1-204ENST00000594399 NUTM2GQ5VZR2 741 aa14.73□□□□□ -0.05
USE1-204ENST00000594399 NLRP13Q86W25 1043 aa14.73□□□□□ -0.05
USE1-204ENST00000594399 RGS17Q9UGC6 210 aaPredicted RBP14.73□□□□□ -0.05
USE1-204ENST00000594399 PNPLA6Q8IY17 1366 aa14.72□□□□□ -0.05
USE1-204ENST00000594399 NFAT5O94916 1531 aa14.71□□□□□ -0.05
USE1-204ENST00000594399 MYBBP1AQ9BQG0 1328 aaKnown RBP14.7□□□□□ -0.06
USE1-204ENST00000594399 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
USE1-204ENST00000594399 NUTM2BA6NNL0 878 aaPredicted RBP14.69□□□□□ -0.06
USE1-204ENST00000594399 NUTM2EB1AL46 878 aaPredicted RBP14.69□□□□□ -0.06
USE1-204ENST00000594399 TNNT2P45379 298 aaPredicted RBP14.69□□□□□ -0.06
USE1-204ENST00000594399 NUTM2AQ8IVF1 878 aaPredicted RBP14.69□□□□□ -0.06
USE1-204ENST00000594399 SMG6Q86US8 1419 aaKnown RBP14.68□□□□□ -0.06
USE1-204ENST00000594399 LRP6O75581 1613 aa14.68□□□□□ -0.06
USE1-204ENST00000594399 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
USE1-204ENST00000594399 LTN1O94822 1766 aa14.68□□□□□ -0.06
USE1-204ENST00000594399 SOX12O15370 315 aa14.67□□□□□ -0.06
USE1-204ENST00000594399 PLEKHG5O94827 1062 aa14.67□□□□□ -0.06
USE1-204ENST00000594399 ZNF772Q68DY9 489 aaPredicted RBP14.67□□□□□ -0.06
USE1-204ENST00000594399 CDK12Q9NYV4 1490 aaPredicted RBP14.66□□□□□ -0.06
USE1-204ENST00000594399 GCP02774 474 aa14.66□□□□□ -0.06
USE1-204ENST00000594399 PPP2R1AP30153 589 aa14.66□□□□□ -0.06
USE1-204ENST00000594399 POTEAQ6S8J7 498 aa14.66□□□□□ -0.06
USE1-204ENST00000594399 MAP2P11137 1827 aaKnown RBP14.65□□□□□ -0.06
USE1-204ENST00000594399 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
USE1-204ENST00000594399 MIER1Q8N108 512 aa14.65□□□□□ -0.06
USE1-204ENST00000594399 CABLES1Q8TDN4 633 aa14.65□□□□□ -0.06
USE1-204ENST00000594399 PEAK1Q9H792 1746 aa14.65□□□□□ -0.06
USE1-204ENST00000594399 RTL1A6NKG5 1358 aa14.64□□□□□ -0.07
USE1-204ENST00000594399 ABCC6O95255 1503 aa14.64□□□□□ -0.07
USE1-204ENST00000594399 MAP3K19Q56UN5 1328 aa14.64□□□□□ -0.07
USE1-204ENST00000594399 CPDO75976 1380 aa14.63□□□□□ -0.07
USE1-204ENST00000594399 KIF24Q5T7B8 1368 aa14.63□□□□□ -0.07
USE1-204ENST00000594399 FBLN1P23142 703 aa14.63□□□□□ -0.07
USE1-204ENST00000594399 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
USE1-204ENST00000594399 POLKQ9UBT6 870 aa14.63□□□□□ -0.07
USE1-204ENST00000594399 EMILIN1Q9Y6C2 1016 aa14.62□□□□□ -0.07
USE1-204ENST00000594399 FLT4P35916 1363 aa14.61□□□□□ -0.07
USE1-204ENST00000594399 MTHFSP49914 203 aa14.61□□□□□ -0.07
USE1-204ENST00000594399 C8orf37Q96NL8 207 aa14.61□□□□□ -0.07
USE1-204ENST00000594399 KIAA0232Q92628 1395 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms