RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PANK1Q8TE04 598 aa21.39■■□□□ 1.01
PRKCSH-217ENST00000592741 PNPLA6Q8IY17 1366 aa21.39■■□□□ 1.01
PRKCSH-217ENST00000592741 KNDC1Q76NI1 1749 aa21.38■■□□□ 1.01
PRKCSH-217ENST00000592741 DIAPH1O60610 1272 aaKnown RBP21.38■■□□□ 1.01
PRKCSH-217ENST00000592741 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
PRKCSH-217ENST00000592741 CLUAP1Q96AJ1 413 aa21.38■■□□□ 1.01
PRKCSH-217ENST00000592741 PNNQ9H307 717 aaKnown RBP21.38■■□□□ 1.01
PRKCSH-217ENST00000592741 TMPOP42166 694 aaKnown RBP21.37■■□□□ 1.01
PRKCSH-217ENST00000592741 COG6Q9Y2V7 657 aa21.37■■□□□ 1.01
PRKCSH-217ENST00000592741 AAMPQ13685 434 aa21.37■■□□□ 1.01
PRKCSH-217ENST00000592741 TNRQ92752 1358 aa21.36■■□□□ 1.01
PRKCSH-217ENST00000592741 CT47B1P0C2W7 299 aaPredicted RBP21.36■■□□□ 1.01
PRKCSH-217ENST00000592741 METP08581 1390 aa21.36■■□□□ 1.01
PRKCSH-217ENST00000592741 CDC42BPGQ6DT37 1551 aa21.36■■□□□ 1.01
PRKCSH-217ENST00000592741 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
PRKCSH-217ENST00000592741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.35■■□□□ 1.01
PRKCSH-217ENST00000592741 FAM161AQ3B820 660 aa21.34■■□□□ 1.01
PRKCSH-217ENST00000592741 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
PRKCSH-217ENST00000592741 EDC4Q6P2E9 1401 aaKnown RBP21.33■■□□□ 1.01
PRKCSH-217ENST00000592741 PPIP5K1Q6PFW1 1433 aa21.33■■□□□ 1.01
PRKCSH-217ENST00000592741 TECPR2O15040 1411 aa21.33■■□□□ 1
PRKCSH-217ENST00000592741 IL16Q14005 1332 aa21.33■■□□□ 1
PRKCSH-217ENST00000592741 SIRT1Q96EB6 747 aa21.32■■□□□ 1
PRKCSH-217ENST00000592741 TRIM35Q9UPQ4 493 aa21.32■■□□□ 1
PRKCSH-217ENST00000592741 CPSF1Q10570 1443 aaKnown RBP21.32■■□□□ 1
PRKCSH-217ENST00000592741 CPS1P31327 1500 aa21.32■■□□□ 1
PRKCSH-217ENST00000592741 IGHDP01880 384 aa21.32■■□□□ 1
PRKCSH-217ENST00000592741 RGS3P49796 1198 aa21.32■■□□□ 1
PRKCSH-217ENST00000592741 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
PRKCSH-217ENST00000592741 TXNDC2Q86VQ3 553 aa21.31■■□□□ 1
PRKCSH-217ENST00000592741 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
PRKCSH-217ENST00000592741 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
PRKCSH-217ENST00000592741 RIPK4P57078 832 aa21.29■■□□□ 1
PRKCSH-217ENST00000592741 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
PRKCSH-217ENST00000592741 POLKQ9UBT6 870 aa21.29■■□□□ 1
PRKCSH-217ENST00000592741 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
PRKCSH-217ENST00000592741 FCHSD2O94868 740 aa21.29■■□□□ 1
PRKCSH-217ENST00000592741 C8orf34Q49A92 452 aa21.29■■□□□ 1
PRKCSH-217ENST00000592741 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
PRKCSH-217ENST00000592741 TMEM2Q9UHN6 1383 aa21.29■■□□□ 1
PRKCSH-217ENST00000592741 RLBP1P12271 317 aa21.28■■□□□ 1
PRKCSH-217ENST00000592741 MON2Q7Z3U7 1717 aa21.27■■□□□ 1
PRKCSH-217ENST00000592741 NEFMP07197 916 aa21.27■■□□□ 1
PRKCSH-217ENST00000592741 EXOSC9Q06265 439 aaKnown RBP21.27■■□□□ 1
PRKCSH-217ENST00000592741 ZKSCAN2Q63HK3 967 aa21.27■■□□□ 1
PRKCSH-217ENST00000592741 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
PRKCSH-217ENST00000592741 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
PRKCSH-217ENST00000592741 PPM1GO15355 546 aaPredicted RBP21.26■□□□□ 0.99
PRKCSH-217ENST00000592741 TNNQ9UQP3 1299 aa21.26■□□□□ 0.99
PRKCSH-217ENST00000592741 ITSN1Q15811 1721 aa21.25■□□□□ 0.99
PRKCSH-217ENST00000592741 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
PRKCSH-217ENST00000592741 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
PRKCSH-217ENST00000592741 CCDC61Q9Y6R9 512 aa21.25■□□□□ 0.99
PRKCSH-217ENST00000592741 CDK12Q9NYV4 1490 aaPredicted RBP21.24■□□□□ 0.99
PRKCSH-217ENST00000592741 AKAP12Q02952 1782 aa21.24■□□□□ 0.99
PRKCSH-217ENST00000592741 AATKQ6ZMQ8 1374 aa21.24■□□□□ 0.99
PRKCSH-217ENST00000592741 PRKAR2BP31323 418 aa21.23■□□□□ 0.99
PRKCSH-217ENST00000592741 MVPQ14764 893 aaKnown RBP21.23■□□□□ 0.99
PRKCSH-217ENST00000592741 NME9Q86XW9 330 aa21.23■□□□□ 0.99
PRKCSH-217ENST00000592741 FTSJ3Q8IY81 847 aaKnown RBP21.23■□□□□ 0.99
PRKCSH-217ENST00000592741 NBR1Q14596 966 aa21.23■□□□□ 0.99
PRKCSH-217ENST00000592741 DZIP1LQ8IYY4 767 aaKnown RBP21.23■□□□□ 0.99
PRKCSH-217ENST00000592741 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
PRKCSH-217ENST00000592741 FBLN1P23142 703 aa21.22■□□□□ 0.99
PRKCSH-217ENST00000592741 ADAMTS13Q76LX8 1427 aa21.21■□□□□ 0.99
PRKCSH-217ENST00000592741 COG3Q96JB2 828 aa21.21■□□□□ 0.99
PRKCSH-217ENST00000592741 PCDHB15Q9Y5E8 787 aa21.21■□□□□ 0.99
PRKCSH-217ENST00000592741 C3P01024 1663 aa21.21■□□□□ 0.99
PRKCSH-217ENST00000592741 EMILIN1Q9Y6C2 1016 aa21.2■□□□□ 0.98
PRKCSH-217ENST00000592741 SSH1Q8WYL5 1049 aa21.2■□□□□ 0.98
PRKCSH-217ENST00000592741 RWDD1Q9H446 243 aaPredicted RBP21.2■□□□□ 0.98
PRKCSH-217ENST00000592741 PLEKHG1Q9ULL1 1385 aa21.2■□□□□ 0.98
PRKCSH-217ENST00000592741 ZNF692Q9BU19 519 aaPredicted RBP21.19■□□□□ 0.98
PRKCSH-217ENST00000592741 ROBO2Q9HCK4 1378 aa21.19■□□□□ 0.98
PRKCSH-217ENST00000592741 IL13P35225 146 aa21.18■□□□□ 0.98
PRKCSH-217ENST00000592741 NFE2L2Q16236 605 aa21.18■□□□□ 0.98
PRKCSH-217ENST00000592741 ZRANB1Q9UGI0 708 aa21.17■□□□□ 0.98
PRKCSH-217ENST00000592741 NCKAP5LQ9HCH0 1330 aa21.17■□□□□ 0.98
PRKCSH-217ENST00000592741 PRR36Q9H6K5 1346 aa21.17■□□□□ 0.98
PRKCSH-217ENST00000592741 HMOX1P09601 288 aa21.16■□□□□ 0.98
PRKCSH-217ENST00000592741 TRIM27P14373 513 aa21.16■□□□□ 0.98
PRKCSH-217ENST00000592741 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
PRKCSH-217ENST00000592741 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
PRKCSH-217ENST00000592741 KIF16BQ96L93 1317 aa21.16■□□□□ 0.98
PRKCSH-217ENST00000592741 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
PRKCSH-217ENST00000592741 RTL5Q5HYW3 569 aaPredicted RBP21.15■□□□□ 0.98
PRKCSH-217ENST00000592741 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.15■□□□□ 0.98
PRKCSH-217ENST00000592741 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.98
PRKCSH-217ENST00000592741 TOPAZ1Q8N9V7 1692 aa21.14■□□□□ 0.97
PRKCSH-217ENST00000592741 IPO8O15397 1037 aaKnown RBP21.14■□□□□ 0.97
PRKCSH-217ENST00000592741 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.97
PRKCSH-217ENST00000592741 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
PRKCSH-217ENST00000592741 LTKP29376 864 aa21.13■□□□□ 0.97
PRKCSH-217ENST00000592741 ZNF428Q96B54 188 aa21.13■□□□□ 0.97
PRKCSH-217ENST00000592741 NRKQ7Z2Y5 1582 aa21.12■□□□□ 0.97
PRKCSH-217ENST00000592741 ITPRIPQ8IWB1 547 aa21.12■□□□□ 0.97
PRKCSH-217ENST00000592741 DAXXQ9UER7 740 aaPredicted RBP21.12■□□□□ 0.97
PRKCSH-217ENST00000592741 PDZRN3Q9UPQ7 1066 aa21.12■□□□□ 0.97
PRKCSH-217ENST00000592741 RRS1Q15050 365 aaKnown RBP21.11■□□□□ 0.97
PRKCSH-217ENST00000592741 LMOD3Q0VAK6 560 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms