RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 DIAPH1O60610 1272 aaKnown RBP24.78■■□□□ 1.56
PRKCSH-209ENST00000589838 PNPLA6Q8IY17 1366 aa24.77■■□□□ 1.56
PRKCSH-209ENST00000589838 WASLO00401 505 aaPredicted RBP24.77■■□□□ 1.56
PRKCSH-209ENST00000589838 RARSP54136 660 aaKnown RBP24.77■■□□□ 1.56
PRKCSH-209ENST00000589838 CT47B1P0C2W7 299 aaPredicted RBP24.77■■□□□ 1.56
PRKCSH-209ENST00000589838 PLEKHF1Q96S99 279 aa24.77■■□□□ 1.56
PRKCSH-209ENST00000589838 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
PRKCSH-209ENST00000589838 TECPR2O15040 1411 aa24.76■■□□□ 1.55
PRKCSH-209ENST00000589838 METP08581 1390 aa24.75■■□□□ 1.55
PRKCSH-209ENST00000589838 UBR1Q8IWV7 1749 aa24.74■■□□□ 1.55
PRKCSH-209ENST00000589838 EDC4Q6P2E9 1401 aaKnown RBP24.73■■□□□ 1.55
PRKCSH-209ENST00000589838 TMPOP42166 694 aaKnown RBP24.73■■□□□ 1.55
PRKCSH-209ENST00000589838 TMEM2Q9UHN6 1383 aa24.72■■□□□ 1.55
PRKCSH-209ENST00000589838 IL16Q14005 1332 aa24.72■■□□□ 1.55
PRKCSH-209ENST00000589838 CPSF1Q10570 1443 aaKnown RBP24.72■■□□□ 1.55
PRKCSH-209ENST00000589838 CPS1P31327 1500 aa24.72■■□□□ 1.55
PRKCSH-209ENST00000589838 CDC42BPGQ6DT37 1551 aa24.72■■□□□ 1.55
PRKCSH-209ENST00000589838 PPIP5K1Q6PFW1 1433 aa24.71■■□□□ 1.55
PRKCSH-209ENST00000589838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.7■■□□□ 1.55
PRKCSH-209ENST00000589838 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.55
PRKCSH-209ENST00000589838 FCHSD2O94868 740 aa24.7■■□□□ 1.54
PRKCSH-209ENST00000589838 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.54
PRKCSH-209ENST00000589838 FRAT1Q92837 279 aaPredicted RBP24.7■■□□□ 1.54
PRKCSH-209ENST00000589838 CLUAP1Q96AJ1 413 aa24.69■■□□□ 1.54
PRKCSH-209ENST00000589838 NEFMP07197 916 aa24.68■■□□□ 1.54
PRKCSH-209ENST00000589838 NUDT16Q96DE0 195 aaKnown RBP24.68■■□□□ 1.54
PRKCSH-209ENST00000589838 CCDC61Q9Y6R9 512 aa24.68■■□□□ 1.54
PRKCSH-209ENST00000589838 MAP2P11137 1827 aaKnown RBP24.68■■□□□ 1.54
PRKCSH-209ENST00000589838 PANK1Q8TE04 598 aa24.66■■□□□ 1.54
PRKCSH-209ENST00000589838 COG6Q9Y2V7 657 aa24.66■■□□□ 1.54
PRKCSH-209ENST00000589838 POLKQ9UBT6 870 aa24.66■■□□□ 1.54
PRKCSH-209ENST00000589838 TRIM35Q9UPQ4 493 aa24.66■■□□□ 1.54
PRKCSH-209ENST00000589838 ZNF692Q9BU19 519 aaPredicted RBP24.65■■□□□ 1.54
PRKCSH-209ENST00000589838 MON2Q7Z3U7 1717 aa24.65■■□□□ 1.54
PRKCSH-209ENST00000589838 RIPK4P57078 832 aa24.64■■□□□ 1.54
PRKCSH-209ENST00000589838 ITSN1Q15811 1721 aa24.64■■□□□ 1.53
PRKCSH-209ENST00000589838 AKAP12Q02952 1782 aa24.63■■□□□ 1.53
PRKCSH-209ENST00000589838 NPM2Q86SE8 214 aaKnown RBP24.63■■□□□ 1.53
PRKCSH-209ENST00000589838 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
PRKCSH-209ENST00000589838 AATKQ6ZMQ8 1374 aa24.63■■□□□ 1.53
PRKCSH-209ENST00000589838 PLEKHG1Q9ULL1 1385 aa24.63■■□□□ 1.53
PRKCSH-209ENST00000589838 FAM161AQ3B820 660 aa24.62■■□□□ 1.53
PRKCSH-209ENST00000589838 ZKSCAN2Q63HK3 967 aa24.61■■□□□ 1.53
PRKCSH-209ENST00000589838 SKAP1Q86WV1 359 aa24.6■■□□□ 1.53
PRKCSH-209ENST00000589838 COG3Q96JB2 828 aa24.6■■□□□ 1.53
PRKCSH-209ENST00000589838 PPM1GO15355 546 aaPredicted RBP24.6■■□□□ 1.53
PRKCSH-209ENST00000589838 CDK12Q9NYV4 1490 aaPredicted RBP24.59■■□□□ 1.53
PRKCSH-209ENST00000589838 ADAMTS13Q76LX8 1427 aa24.59■■□□□ 1.53
PRKCSH-209ENST00000589838 LRRC7Q96NW7 1537 aa24.58■■□□□ 1.53
PRKCSH-209ENST00000589838 PAK3O75914 559 aaPredicted RBP24.58■■□□□ 1.53
PRKCSH-209ENST00000589838 IGHDP01880 384 aa24.58■■□□□ 1.53
PRKCSH-209ENST00000589838 EXOSC9Q06265 439 aaKnown RBP24.58■■□□□ 1.53
PRKCSH-209ENST00000589838 TSR2Q969E8 191 aaKnown RBP24.58■■□□□ 1.53
PRKCSH-209ENST00000589838 DDRGK1Q96HY6 314 aa24.58■■□□□ 1.53
PRKCSH-209ENST00000589838 RSPH6AQ9H0K4 717 aa24.58■■□□□ 1.53
PRKCSH-209ENST00000589838 NME9Q86XW9 330 aa24.57■■□□□ 1.52
PRKCSH-209ENST00000589838 EID1Q9Y6B2 187 aa24.57■■□□□ 1.52
PRKCSH-209ENST00000589838 PRKAR2BP31323 418 aa24.56■■□□□ 1.52
PRKCSH-209ENST00000589838 CALD1Q05682 793 aaKnown RBP24.56■■□□□ 1.52
PRKCSH-209ENST00000589838 BCL2L13Q9BXK5 485 aa24.56■■□□□ 1.52
PRKCSH-209ENST00000589838 C3P01024 1663 aa24.56■■□□□ 1.52
PRKCSH-209ENST00000589838 RGS3P49796 1198 aa24.55■■□□□ 1.52
PRKCSH-209ENST00000589838 SMC4Q9NTJ3 1288 aa24.55■■□□□ 1.52
PRKCSH-209ENST00000589838 ROBO2Q9HCK4 1378 aa24.55■■□□□ 1.52
PRKCSH-209ENST00000589838 RLBP1P12271 317 aa24.54■■□□□ 1.52
PRKCSH-209ENST00000589838 MVPQ14764 893 aaKnown RBP24.54■■□□□ 1.52
PRKCSH-209ENST00000589838 FTSJ3Q8IY81 847 aaKnown RBP24.54■■□□□ 1.52
PRKCSH-209ENST00000589838 DZIP1LQ8IYY4 767 aaKnown RBP24.54■■□□□ 1.52
PRKCSH-209ENST00000589838 NFE2L2Q16236 605 aa24.53■■□□□ 1.52
PRKCSH-209ENST00000589838 IL13P35225 146 aa24.53■■□□□ 1.52
PRKCSH-209ENST00000589838 RWDD1Q9H446 243 aaPredicted RBP24.53■■□□□ 1.52
PRKCSH-209ENST00000589838 EMILIN1Q9Y6C2 1016 aa24.52■■□□□ 1.52
PRKCSH-209ENST00000589838 LTKP29376 864 aa24.51■■□□□ 1.51
PRKCSH-209ENST00000589838 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
PRKCSH-209ENST00000589838 C8orf34Q49A92 452 aa24.51■■□□□ 1.51
PRKCSH-209ENST00000589838 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.51■■□□□ 1.51
PRKCSH-209ENST00000589838 PRR36Q9H6K5 1346 aa24.51■■□□□ 1.51
PRKCSH-209ENST00000589838 SLIT1O75093 1534 aa24.5■■□□□ 1.51
PRKCSH-209ENST00000589838 IPO8O15397 1037 aaKnown RBP24.5■■□□□ 1.51
PRKCSH-209ENST00000589838 FBLN1P23142 703 aa24.5■■□□□ 1.51
PRKCSH-209ENST00000589838 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
PRKCSH-209ENST00000589838 TOPAZ1Q8N9V7 1692 aa24.5■■□□□ 1.51
PRKCSH-209ENST00000589838 PLEKHG3A1L390 1219 aa24.49■■□□□ 1.51
PRKCSH-209ENST00000589838 SSH1Q8WYL5 1049 aa24.49■■□□□ 1.51
PRKCSH-209ENST00000589838 TNNQ9UQP3 1299 aa24.49■■□□□ 1.51
PRKCSH-209ENST00000589838 KIF16BQ96L93 1317 aa24.49■■□□□ 1.51
PRKCSH-209ENST00000589838 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
PRKCSH-209ENST00000589838 ZRANB1Q9UGI0 708 aa24.48■■□□□ 1.51
PRKCSH-209ENST00000589838 NCKAP5LQ9HCH0 1330 aa24.48■■□□□ 1.51
PRKCSH-209ENST00000589838 ARHGAP23Q9P227 1491 aa24.48■■□□□ 1.51
PRKCSH-209ENST00000589838 PCDHB15Q9Y5E8 787 aa24.47■■□□□ 1.51
PRKCSH-209ENST00000589838 VIRMAQ69YN4 1812 aaKnown RBP24.47■■□□□ 1.51
PRKCSH-209ENST00000589838 HMOX1P09601 288 aa24.47■■□□□ 1.51
PRKCSH-209ENST00000589838 ATF7IPQ6VMQ6 1270 aa24.47■■□□□ 1.51
PRKCSH-209ENST00000589838 TBX22Q9Y458 520 aa24.47■■□□□ 1.51
PRKCSH-209ENST00000589838 FER1L4A9Z1Z3 1794 aa24.46■■□□□ 1.51
PRKCSH-209ENST00000589838 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
PRKCSH-209ENST00000589838 DDX19BQ9UMR2 479 aa24.46■■□□□ 1.51
PRKCSH-209ENST00000589838 TTC21BQ7Z4L5 1316 aa24.45■■□□□ 1.51
PRKCSH-209ENST00000589838 NRKQ7Z2Y5 1582 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms