RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 BRD4O60885 1362 aaPredicted RBP21.34■■□□□ 1.01
RPRD1A-208ENST00000589050 EDC4Q6P2E9 1401 aaKnown RBP21.33■■□□□ 1.01
RPRD1A-208ENST00000589050 SPATA31A3Q5VYP0 1347 aa21.32■■□□□ 1
RPRD1A-208ENST00000589050 TTC21BQ7Z4L5 1316 aa21.32■■□□□ 1
RPRD1A-208ENST00000589050 TNS3Q68CZ2 1445 aa21.32■■□□□ 1
RPRD1A-208ENST00000589050 SSH2Q76I76 1423 aa21.32■■□□□ 1
RPRD1A-208ENST00000589050 LMOD2Q6P5Q4 547 aa21.32■■□□□ 1
RPRD1A-208ENST00000589050 MON2Q7Z3U7 1717 aa21.32■■□□□ 1
RPRD1A-208ENST00000589050 TRPM3Q9HCF6 1732 aaPredicted RBP21.32■■□□□ 1
RPRD1A-208ENST00000589050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.31■■□□□ 1
RPRD1A-208ENST00000589050 CARD14Q9BXL6 1004 aa21.31■■□□□ 1
RPRD1A-208ENST00000589050 NRKQ7Z2Y5 1582 aa21.3■■□□□ 1
RPRD1A-208ENST00000589050 TTC21AQ8NDW8 1320 aa21.29■■□□□ 1
RPRD1A-208ENST00000589050 NSD3Q9BZ95 1437 aa21.29■■□□□ 1
RPRD1A-208ENST00000589050 ARHGEF10O15013 1369 aa21.28■■□□□ 1
RPRD1A-208ENST00000589050 ABTB2Q8N961 1025 aa21.28■■□□□ 1
RPRD1A-208ENST00000589050 JCADQ9P266 1359 aa21.27■■□□□ 1
RPRD1A-208ENST00000589050 ILDR1Q86SU0 546 aaPredicted RBP21.27■■□□□ 1
RPRD1A-208ENST00000589050 PNPLA6Q8IY17 1366 aa21.26■□□□□ 0.99
RPRD1A-208ENST00000589050 NUTM2GQ5VZR2 741 aa21.26■□□□□ 0.99
RPRD1A-208ENST00000589050 ALS2Q96Q42 1657 aa21.25■□□□□ 0.99
RPRD1A-208ENST00000589050 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
RPRD1A-208ENST00000589050 NME9Q86XW9 330 aa21.25■□□□□ 0.99
RPRD1A-208ENST00000589050 PLEKHG5O94827 1062 aa21.24■□□□□ 0.99
RPRD1A-208ENST00000589050 KNSTRNQ9Y448 316 aa21.24■□□□□ 0.99
RPRD1A-208ENST00000589050 CGNL1Q0VF96 1302 aa21.23■□□□□ 0.99
RPRD1A-208ENST00000589050 PIK3C2AO00443 1686 aa21.22■□□□□ 0.99
RPRD1A-208ENST00000589050 NLRP6P59044 892 aa21.22■□□□□ 0.99
RPRD1A-208ENST00000589050 ZRANB1Q9UGI0 708 aa21.22■□□□□ 0.99
RPRD1A-208ENST00000589050 FYB1O15117 783 aa21.21■□□□□ 0.99
RPRD1A-208ENST00000589050 PER1O15534 1290 aaPredicted RBP21.21■□□□□ 0.99
RPRD1A-208ENST00000589050 NLRP13Q86W25 1043 aa21.21■□□□□ 0.99
RPRD1A-208ENST00000589050 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
RPRD1A-208ENST00000589050 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
RPRD1A-208ENST00000589050 COL22A1Q8NFW1 1626 aaPredicted RBP21.19■□□□□ 0.98
RPRD1A-208ENST00000589050 CABLES1Q8TDN4 633 aa21.19■□□□□ 0.98
RPRD1A-208ENST00000589050 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
RPRD1A-208ENST00000589050 MED1Q15648 1581 aaPredicted RBP21.19■□□□□ 0.98
RPRD1A-208ENST00000589050 COG3Q96JB2 828 aa21.18■□□□□ 0.98
RPRD1A-208ENST00000589050 NUTM2BA6NNL0 878 aaPredicted RBP21.17■□□□□ 0.98
RPRD1A-208ENST00000589050 NUTM2EB1AL46 878 aaPredicted RBP21.17■□□□□ 0.98
RPRD1A-208ENST00000589050 HAP1P54257 671 aaPredicted RBP21.17■□□□□ 0.98
RPRD1A-208ENST00000589050 NUTM2AQ8IVF1 878 aaPredicted RBP21.17■□□□□ 0.98
RPRD1A-208ENST00000589050 USP19O94966 1318 aa21.17■□□□□ 0.98
RPRD1A-208ENST00000589050 SPATA31A6Q5VVP1 1343 aa21.17■□□□□ 0.98
RPRD1A-208ENST00000589050 OVOS2A0A0J9YW53 1432 aa21.16■□□□□ 0.98
RPRD1A-208ENST00000589050 OVOS2Q6IE36 1432 aa21.16■□□□□ 0.98
RPRD1A-208ENST00000589050 AMER1Q5JTC6 1135 aaPredicted RBP21.16■□□□□ 0.98
RPRD1A-208ENST00000589050 KIF20BQ96Q89 1820 aa21.15■□□□□ 0.98
RPRD1A-208ENST00000589050 NSD2O96028 1365 aa21.15■□□□□ 0.98
RPRD1A-208ENST00000589050 SOX12O15370 315 aa21.13■□□□□ 0.97
RPRD1A-208ENST00000589050 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
RPRD1A-208ENST00000589050 CC2D1BQ5T0F9 858 aaKnown RBP21.13■□□□□ 0.97
RPRD1A-208ENST00000589050 SLIT3O75094 1523 aa21.13■□□□□ 0.97
RPRD1A-208ENST00000589050 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
RPRD1A-208ENST00000589050 GCP02774 474 aa21.12■□□□□ 0.97
RPRD1A-208ENST00000589050 CRYBG1Q9Y4K1 1723 aa21.12■□□□□ 0.97
RPRD1A-208ENST00000589050 PHRF1Q9P1Y6 1649 aaKnown RBP21.11■□□□□ 0.97
RPRD1A-208ENST00000589050 KCNH5Q8NCM2 988 aa21.11■□□□□ 0.97
RPRD1A-208ENST00000589050 ABCA3Q99758 1704 aa21.11■□□□□ 0.97
RPRD1A-208ENST00000589050 MARF1Q9Y4F3 1742 aaKnown RBP21.11■□□□□ 0.97
RPRD1A-208ENST00000589050 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
RPRD1A-208ENST00000589050 ADAMTS2O95450 1211 aa21.1■□□□□ 0.97
RPRD1A-208ENST00000589050 LRP6O75581 1613 aa21.1■□□□□ 0.97
RPRD1A-208ENST00000589050 MORC1Q86VD1 984 aa21.09■□□□□ 0.97
RPRD1A-208ENST00000589050 ZC3H6P61129 1189 aaKnown RBP21.08■□□□□ 0.97
RPRD1A-208ENST00000589050 TNNT2P45379 298 aaPredicted RBP21.07■□□□□ 0.96
RPRD1A-208ENST00000589050 MEX3CQ5U5Q3 659 aaKnown RBP21.07■□□□□ 0.96
RPRD1A-208ENST00000589050 NFAT5O94916 1531 aa21.07■□□□□ 0.96
RPRD1A-208ENST00000589050 ZBTB7CA1YPR0 619 aa21.06■□□□□ 0.96
RPRD1A-208ENST00000589050 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
RPRD1A-208ENST00000589050 FBLN1P23142 703 aa21.05■□□□□ 0.96
RPRD1A-208ENST00000589050 KIAA0232Q92628 1395 aa21.05■□□□□ 0.96
RPRD1A-208ENST00000589050 PRDM11Q9NQV5 511 aa21.04■□□□□ 0.96
RPRD1A-208ENST00000589050 CPDO75976 1380 aa21.04■□□□□ 0.96
RPRD1A-208ENST00000589050 C8orf37Q96NL8 207 aa21.03■□□□□ 0.96
RPRD1A-208ENST00000589050 RRS1Q15050 365 aaKnown RBP21.02■□□□□ 0.96
RPRD1A-208ENST00000589050 CHRNA2Q15822 529 aa21.02■□□□□ 0.96
RPRD1A-208ENST00000589050 ARHGEF25Q86VW2 580 aa21.02■□□□□ 0.96
RPRD1A-208ENST00000589050 AATKQ6ZMQ8 1374 aa21.01■□□□□ 0.95
RPRD1A-208ENST00000589050 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
RPRD1A-208ENST00000589050 MAP3K19Q56UN5 1328 aa21■□□□□ 0.95
RPRD1A-208ENST00000589050 NGLY1Q96IV0 654 aa20.99■□□□□ 0.95
RPRD1A-208ENST00000589050 EMILIN1Q9Y6C2 1016 aa20.98■□□□□ 0.95
RPRD1A-208ENST00000589050 PARD3Q8TEW0 1356 aa20.97■□□□□ 0.95
RPRD1A-208ENST00000589050 AMPHP49418 695 aa20.97■□□□□ 0.95
RPRD1A-208ENST00000589050 POLKQ9UBT6 870 aa20.97■□□□□ 0.95
RPRD1A-208ENST00000589050 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
RPRD1A-208ENST00000589050 PPM1GO15355 546 aaPredicted RBP20.96■□□□□ 0.95
RPRD1A-208ENST00000589050 RALBP1Q15311 655 aa20.96■□□□□ 0.95
RPRD1A-208ENST00000589050 BTG4Q9NY30 223 aa20.95■□□□□ 0.94
RPRD1A-208ENST00000589050 RTL1A6NKG5 1358 aa20.95■□□□□ 0.94
RPRD1A-208ENST00000589050 IP6K1Q92551 441 aa20.94■□□□□ 0.94
RPRD1A-208ENST00000589050 AFF2P51816 1311 aa20.94■□□□□ 0.94
RPRD1A-208ENST00000589050 LTN1O94822 1766 aa20.94■□□□□ 0.94
RPRD1A-208ENST00000589050 SLIT2O94813 1529 aa20.94■□□□□ 0.94
RPRD1A-208ENST00000589050 ABCC6O95255 1503 aa20.94■□□□□ 0.94
RPRD1A-208ENST00000589050 PPP2R1AP30153 589 aa20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 HOXC9P31274 260 aa20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 FNBP4Q8N3X1 1017 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms